RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 BTG4Q9NY30 223 aa6.95□□□□□ -1.3
CPSF6-206ENST00000550987 B4GALT6Q9UBX8 382 aa6.95□□□□□ -1.3
CPSF6-206ENST00000550987 TIMM13Q9Y5L4 95 aaPredicted RBP6.95□□□□□ -1.3
CPSF6-206ENST00000550987 MARF1Q9Y4F3 1742 aaKnown RBP6.95□□□□□ -1.3
CPSF6-206ENST00000550987 SZT2Q5T011 3432 aa6.95□□□□□ -1.3
CPSF6-206ENST00000550987 UNC79Q9P2D8 2635 aa6.95□□□□□ -1.3
CPSF6-206ENST00000550987 MROH1Q8NDA8 1641 aa6.94□□□□□ -1.3
CPSF6-206ENST00000550987 E2F8A0AVK6 867 aa6.94□□□□□ -1.3
CPSF6-206ENST00000550987 PTPDC1A2A3K4 754 aa6.94□□□□□ -1.3
CPSF6-206ENST00000550987 WASH4PA8MWX3 477 aa6.94□□□□□ -1.3
CPSF6-206ENST00000550987 TRAF5O00463 557 aa6.94□□□□□ -1.3
CPSF6-206ENST00000550987 ZBTB7AO95365 584 aa6.94□□□□□ -1.3
CPSF6-206ENST00000550987 ADCYAP1R1P41586 468 aa6.94□□□□□ -1.3
CPSF6-206ENST00000550987 LSSP48449 732 aa6.94□□□□□ -1.3
CPSF6-206ENST00000550987 FXR1P51114 621 aaKnown RBP eCLIP6.94□□□□□ -1.3
CPSF6-206ENST00000550987 TBX4P57082 545 aa6.94□□□□□ -1.3
CPSF6-206ENST00000550987 RPL11P62913 178 aaKnown RBP6.94□□□□□ -1.3
CPSF6-206ENST00000550987 LSAMPQ13449 338 aa6.94□□□□□ -1.3
CPSF6-206ENST00000550987 LRRC41Q15345 812 aa6.94□□□□□ -1.3
CPSF6-206ENST00000550987 INF2Q27J81 1249 aa6.94□□□□□ -1.3
CPSF6-206ENST00000550987 RTP2Q5QGT7 225 aa6.94□□□□□ -1.3
CPSF6-206ENST00000550987 CREG2Q8IUH2 290 aa6.94□□□□□ -1.3
CPSF6-206ENST00000550987 MYO1HQ8N1T3 1032 aa6.94□□□□□ -1.3
CPSF6-206ENST00000550987 CHST14Q8NCH0 376 aa6.94□□□□□ -1.3
CPSF6-206ENST00000550987 CHTF18Q8WVB6 975 aa6.94□□□□□ -1.3
CPSF6-206ENST00000550987 ARHGEF28Q8N1W1 1705 aaKnown RBP6.93□□□□□ -1.3
CPSF6-206ENST00000550987 ASXL1Q8IXJ9 1541 aa6.93□□□□□ -1.3
CPSF6-206ENST00000550987 AKAP10O43572 662 aa6.93□□□□□ -1.3
CPSF6-206ENST00000550987 NPHS1O60500 1241 aa6.93□□□□□ -1.3
CPSF6-206ENST00000550987 ULK1O75385 1050 aa6.93□□□□□ -1.3
CPSF6-206ENST00000550987 CKMP06732 381 aa6.93□□□□□ -1.3
CPSF6-206ENST00000550987 CT47B1P0C2W7 299 aaPredicted RBP6.93□□□□□ -1.3
CPSF6-206ENST00000550987 ATF3P18847 181 aa6.93□□□□□ -1.3
CPSF6-206ENST00000550987 GTF2A2P52657 109 aa6.93□□□□□ -1.3
CPSF6-206ENST00000550987 OXCT1P55809 520 aa6.93□□□□□ -1.3
CPSF6-206ENST00000550987 DSG1Q02413 1049 aa6.93□□□□□ -1.3
CPSF6-206ENST00000550987 ARHGAP44Q17R89 818 aa6.93□□□□□ -1.3
CPSF6-206ENST00000550987 RGL3Q3MIN7 710 aa6.93□□□□□ -1.3
CPSF6-206ENST00000550987 RNF43Q68DV7 783 aa6.93□□□□□ -1.3
CPSF6-206ENST00000550987 C16orf59Q7L2K0 433 aa6.93□□□□□ -1.3
CPSF6-206ENST00000550987 THAP5Q7Z6K1 395 aa6.93□□□□□ -1.3
CPSF6-206ENST00000550987 SHISA5Q8N114 240 aa6.93□□□□□ -1.3
CPSF6-206ENST00000550987 CISD2Q8N5K1 135 aaKnown RBP6.93□□□□□ -1.3
CPSF6-206ENST00000550987 HOOK2Q96ED9 719 aa6.93□□□□□ -1.3
CPSF6-206ENST00000550987 METTL22Q9BUU2 404 aaPredicted RBP6.93□□□□□ -1.3
CPSF6-206ENST00000550987 TRIM8Q9BZR9 551 aa6.93□□□□□ -1.3
CPSF6-206ENST00000550987 CLDND1Q9NY35 253 aa6.93□□□□□ -1.3
CPSF6-206ENST00000550987 NLRP1Q9C000 1473 aa6.92□□□□□ -1.3
CPSF6-206ENST00000550987 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.92□□□□□ -1.3
CPSF6-206ENST00000550987 FGF10O15520 208 aaPredicted RBP6.92□□□□□ -1.3
CPSF6-206ENST00000550987 WIPF1O43516 503 aa6.92□□□□□ -1.3
CPSF6-206ENST00000550987 KRT37O76014 449 aa6.92□□□□□ -1.3
CPSF6-206ENST00000550987 PRKD3O94806 890 aa6.92□□□□□ -1.3
CPSF6-206ENST00000550987 FBXO21O94952 628 aa6.92□□□□□ -1.3
CPSF6-206ENST00000550987 SCGB1D2O95969 90 aa6.92□□□□□ -1.3
CPSF6-206ENST00000550987 F13BP05160 661 aa6.92□□□□□ -1.3
CPSF6-206ENST00000550987 GRK2P25098 689 aa6.92□□□□□ -1.3
CPSF6-206ENST00000550987 GRK3P35626 688 aa6.92□□□□□ -1.3
CPSF6-206ENST00000550987 PLA2G5P39877 138 aa6.92□□□□□ -1.3
CPSF6-206ENST00000550987 BCL6P41182 706 aa6.92□□□□□ -1.3
CPSF6-206ENST00000550987 PTPN21Q16825 1174 aa6.92□□□□□ -1.3
CPSF6-206ENST00000550987 NKPD1Q17RQ9 610 aa6.92□□□□□ -1.3
CPSF6-206ENST00000550987 LCE2AQ5TA79 106 aaPredicted RBP6.92□□□□□ -1.3
CPSF6-206ENST00000550987 OVCH1Q7RTY7 1134 aa6.92□□□□□ -1.3
CPSF6-206ENST00000550987 WAPLQ7Z5K2 1190 aa6.92□□□□□ -1.3
CPSF6-206ENST00000550987 LRRC59Q96AG4 307 aaKnown RBP6.92□□□□□ -1.3
CPSF6-206ENST00000550987 AHCYL2Q96HN2 611 aaKnown RBP6.92□□□□□ -1.3
CPSF6-206ENST00000550987 SCYL1Q96KG9 808 aa6.92□□□□□ -1.3
CPSF6-206ENST00000550987 SPTLC3Q9NUV7 552 aa6.92□□□□□ -1.3
CPSF6-206ENST00000550987 ZNF180Q9UJW8 692 aa6.92□□□□□ -1.3
CPSF6-206ENST00000550987 ZNF652Q9Y2D9 606 aa6.92□□□□□ -1.3
CPSF6-206ENST00000550987 USP32Q8NFA0 1604 aa6.91□□□□□ -1.3
CPSF6-206ENST00000550987 GOLGA6CA6NDK9 693 aa6.91□□□□□ -1.3
CPSF6-206ENST00000550987 GOLGA6BA6NDN3 693 aa6.91□□□□□ -1.3
CPSF6-206ENST00000550987 GABRDO14764 452 aa6.91□□□□□ -1.3
CPSF6-206ENST00000550987 PEX14O75381 377 aa6.91□□□□□ -1.3
CPSF6-206ENST00000550987 GOLGA6DP0CG33 693 aa6.91□□□□□ -1.3
CPSF6-206ENST00000550987 MYBL2P10244 700 aa6.91□□□□□ -1.3
CPSF6-206ENST00000550987 ATP2A2P16615 1042 aaKnown RBP6.91□□□□□ -1.3
CPSF6-206ENST00000550987 KRT15P19012 456 aa6.91□□□□□ -1.3
CPSF6-206ENST00000550987 GATA4P43694 442 aa6.91□□□□□ -1.3
CPSF6-206ENST00000550987 CLCN7P51798 805 aa6.91□□□□□ -1.3
CPSF6-206ENST00000550987 EGR3Q06889 387 aa6.91□□□□□ -1.3
CPSF6-206ENST00000550987 PIN1Q13526 163 aaPredicted RBP6.91□□□□□ -1.3
CPSF6-206ENST00000550987 HLA-DQA1Q5Y7H0 255 aa6.91□□□□□ -1.3
CPSF6-206ENST00000550987 CYP2R1Q6VVX0 501 aa6.91□□□□□ -1.3
CPSF6-206ENST00000550987 CEP68Q76N32 757 aa6.91□□□□□ -1.3
CPSF6-206ENST00000550987 TMPRSS7Q7RTY8 843 aa6.91□□□□□ -1.3
CPSF6-206ENST00000550987 RELTQ969Z4 430 aa6.91□□□□□ -1.3
CPSF6-206ENST00000550987 TMEM169Q96HH4 297 aa6.91□□□□□ -1.3
CPSF6-206ENST00000550987 MENTQ9BUN1 341 aa6.91□□□□□ -1.3
CPSF6-206ENST00000550987 JAM3Q9BX67 310 aa6.91□□□□□ -1.3
CPSF6-206ENST00000550987 MKNK2Q9HBH9 465 aa6.91□□□□□ -1.3
CPSF6-206ENST00000550987 EMC7Q9NPA0 242 aa6.91□□□□□ -1.3
CPSF6-206ENST00000550987 CRTAC1Q9NQ79 661 aa6.91□□□□□ -1.3
CPSF6-206ENST00000550987 GOLGA6AQ9NYA3 693 aa6.91□□□□□ -1.3
CPSF6-206ENST00000550987 NOB1Q9ULX3 412 aaKnown RBP6.91□□□□□ -1.3
CPSF6-206ENST00000550987 PCDHA11Q9Y5I1 949 aa6.91□□□□□ -1.3
CPSF6-206ENST00000550987 C7orf72A4D263 438 aa6.9□□□□□ -1.3
CPSF6-206ENST00000550987 C1QTNF9BB2RNN3 333 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms