RNA–Protein interactions for RNA: ENST00000550828.1

ERBB3-215, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 266 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-215ENST00000550828 ACTR2P61160 394 aa15.23■□□□□ 0.03
ERBB3-215ENST00000550828 NKX3-2P78367 333 aa15.23■□□□□ 0.03
ERBB3-215ENST00000550828 BEX3Q00994 111 aa15.23■□□□□ 0.03
ERBB3-215ENST00000550828 NEDD9Q14511 834 aa15.23■□□□□ 0.03
ERBB3-215ENST00000550828 STK38Q15208 465 aa15.23■□□□□ 0.03
ERBB3-215ENST00000550828 AXDND1Q5T1B0 1012 aaPredicted RBP15.23■□□□□ 0.03
ERBB3-215ENST00000550828 CLEC17AQ6ZS10 378 aa15.23■□□□□ 0.03
ERBB3-215ENST00000550828 PCYT2Q99447 389 aa15.23■□□□□ 0.03
ERBB3-215ENST00000550828 GPR20Q99678 358 aa15.23■□□□□ 0.03
ERBB3-215ENST00000550828 SDF4Q9BRK5 362 aa15.23■□□□□ 0.03
ERBB3-215ENST00000550828 TBC1D22BQ9NU19 505 aa15.23■□□□□ 0.03
ERBB3-215ENST00000550828 SLC9A2Q9UBY0 812 aa15.23■□□□□ 0.03
ERBB3-215ENST00000550828 ATP6V1DQ9Y5K8 247 aa15.23■□□□□ 0.03
ERBB3-215ENST00000550828 ELP1O95163 1332 aa15.22■□□□□ 0.03
ERBB3-215ENST00000550828 VWA3AA6NCI4 1184 aa15.22■□□□□ 0.03
ERBB3-215ENST00000550828 CHMP2AO43633 222 aa15.22■□□□□ 0.03
ERBB3-215ENST00000550828 ATG7O95352 703 aa15.22■□□□□ 0.03
ERBB3-215ENST00000550828 MMP3P08254 477 aa15.22■□□□□ 0.03
ERBB3-215ENST00000550828 RARBP10826 455 aa15.22■□□□□ 0.03
ERBB3-215ENST00000550828 LAMC2Q13753 1193 aa15.22■□□□□ 0.03
ERBB3-215ENST00000550828 ARL6IP4Q66PJ3 421 aaKnown RBP15.22■□□□□ 0.03
ERBB3-215ENST00000550828 ZNF746Q6NUN9 644 aaPredicted RBP15.22■□□□□ 0.03
ERBB3-215ENST00000550828 USP49Q70CQ1 688 aa15.22■□□□□ 0.03
ERBB3-215ENST00000550828 IGSF22Q8N9C0 903 aa15.22■□□□□ 0.03
ERBB3-215ENST00000550828 KLHDC9Q8NEP7 349 aa15.22■□□□□ 0.03
ERBB3-215ENST00000550828 PPTC7Q8NI37 304 aa15.22■□□□□ 0.03
ERBB3-215ENST00000550828 SPATA33Q96N06 139 aa15.22■□□□□ 0.03
ERBB3-215ENST00000550828 MMTAG2Q9BU76 263 aaKnown RBP15.22■□□□□ 0.03
ERBB3-215ENST00000550828 XPNPEP3Q9NQH7 507 aa15.22■□□□□ 0.03
ERBB3-215ENST00000550828 CFAP45Q9UL16 551 aa15.22■□□□□ 0.03
ERBB3-215ENST00000550828 PCDHA12Q9UN75 941 aa15.22■□□□□ 0.03
ERBB3-215ENST00000550828 CEP131Q9UPN4 1083 aa15.22■□□□□ 0.03
ERBB3-215ENST00000550828 COLQQ9Y215 455 aaPredicted RBP15.22■□□□□ 0.03
ERBB3-215ENST00000550828 Q9Y3F1 56 aa15.22■□□□□ 0.03
ERBB3-215ENST00000550828 SRPRBQ9Y5M8 271 aaKnown RBP15.22■□□□□ 0.03
ERBB3-215ENST00000550828 EVPLQ92817 2033 aa15.22■□□□□ 0.03
ERBB3-215ENST00000550828 DNAH12Q6ZR08 3092 aa15.21■□□□□ 0.03
ERBB3-215ENST00000550828 A6NJR5 290 aa15.21■□□□□ 0.03
ERBB3-215ENST00000550828 PPP6R2O75170 966 aa15.21■□□□□ 0.03
ERBB3-215ENST00000550828 CDC25AP30304 524 aa15.21■□□□□ 0.03
ERBB3-215ENST00000550828 KRT76Q01546 638 aa15.21■□□□□ 0.03
ERBB3-215ENST00000550828 UGCGQ16739 394 aa15.21■□□□□ 0.03
ERBB3-215ENST00000550828 NCAPH2Q6IBW4 605 aa15.21■□□□□ 0.03
ERBB3-215ENST00000550828 CCSAPQ6IQ19 270 aaPredicted RBP15.21■□□□□ 0.03
ERBB3-215ENST00000550828 ABHD15Q6UXT9 468 aa15.21■□□□□ 0.03
ERBB3-215ENST00000550828 DTHD1Q6ZMT9 781 aa15.21■□□□□ 0.03
ERBB3-215ENST00000550828 TRIM50Q86XT4 487 aa15.21■□□□□ 0.03
ERBB3-215ENST00000550828 CCDC60Q8IWA6 550 aaPredicted RBP15.21■□□□□ 0.03
ERBB3-215ENST00000550828 GIMAP8Q8ND71 665 aaPredicted RBP15.21■□□□□ 0.03
ERBB3-215ENST00000550828 SPATA32Q96LK8 384 aa15.21■□□□□ 0.03
ERBB3-215ENST00000550828 DEFB118Q96PH6 123 aa15.21■□□□□ 0.03
ERBB3-215ENST00000550828 RNF208Q9H0X6 261 aa15.21■□□□□ 0.03
ERBB3-215ENST00000550828 CSRNP2Q9H175 543 aa15.21■□□□□ 0.03
ERBB3-215ENST00000550828 MLXIPQ9HAP2 919 aa15.21■□□□□ 0.03
ERBB3-215ENST00000550828 WRAP73Q9P2S5 460 aaPredicted RBP15.21■□□□□ 0.03
ERBB3-215ENST00000550828 PCDHA7Q9UN72 937 aa15.21■□□□□ 0.03
ERBB3-215ENST00000550828 ALPK3Q96L96 1907 aa15.21■□□□□ 0.02
ERBB3-215ENST00000550828 IGKV6D-21A0A0A0MT36 114 aa15.2■□□□□ 0.02
ERBB3-215ENST00000550828 MARCH6O60337 910 aa15.2■□□□□ 0.02
ERBB3-215ENST00000550828 SUPT20HL2P0C7V6 817 aa15.2■□□□□ 0.02
ERBB3-215ENST00000550828 MNX1P50219 401 aaPredicted RBP15.2■□□□□ 0.02
ERBB3-215ENST00000550828 LRRC41Q15345 812 aa15.2■□□□□ 0.02
ERBB3-215ENST00000550828 ECM1Q16610 540 aa15.2■□□□□ 0.02
ERBB3-215ENST00000550828 FSCN1Q16658 493 aaKnown RBP15.2■□□□□ 0.02
ERBB3-215ENST00000550828 SPECC1Q5M775 1068 aa15.2■□□□□ 0.02
ERBB3-215ENST00000550828 KRI1Q8N9T8 703 aaKnown RBP15.2■□□□□ 0.02
ERBB3-215ENST00000550828 KCNG4Q8TDN1 519 aa15.2■□□□□ 0.02
ERBB3-215ENST00000550828 LRRC15Q8TF66 581 aa15.2■□□□□ 0.02
ERBB3-215ENST00000550828 FERMT2Q96AC1 680 aa15.2■□□□□ 0.02
ERBB3-215ENST00000550828 CRISPLD2Q9H0B8 497 aa15.2■□□□□ 0.02
ERBB3-215ENST00000550828 AP5M1Q9H0R1 490 aa15.2■□□□□ 0.02
ERBB3-215ENST00000550828 RGL1Q9NZL6 768 aa15.2■□□□□ 0.02
ERBB3-215ENST00000550828 IGSF9BQ9UPX0 1349 aa15.19■□□□□ 0.02
ERBB3-215ENST00000550828 WDR64B1ANS9 1081 aa15.19■□□□□ 0.02
ERBB3-215ENST00000550828 ZNF862O60290 1169 aa15.19■□□□□ 0.02
ERBB3-215ENST00000550828 MSCO60682 206 aa15.19■□□□□ 0.02
ERBB3-215ENST00000550828 MED24O75448 989 aa15.19■□□□□ 0.02
ERBB3-215ENST00000550828 LGR5O75473 907 aa15.19■□□□□ 0.02
ERBB3-215ENST00000550828 C6orf222P0C671 652 aaPredicted RBP15.19■□□□□ 0.02
ERBB3-215ENST00000550828 ZNF286BP0CG31 522 aa15.19■□□□□ 0.02
ERBB3-215ENST00000550828 SPATA31C1P0DKV0 1188 aa15.19■□□□□ 0.02
ERBB3-215ENST00000550828 CST5P28325 142 aaPredicted RBP15.19■□□□□ 0.02
ERBB3-215ENST00000550828 TCF7P36402 384 aaPredicted RBP15.19■□□□□ 0.02
ERBB3-215ENST00000550828 SHC4Q6S5L8 630 aa15.19■□□□□ 0.02
ERBB3-215ENST00000550828 MIER3Q7Z3K6 550 aa15.19■□□□□ 0.02
ERBB3-215ENST00000550828 TMEM87AQ8NBN3 555 aa15.19■□□□□ 0.02
ERBB3-215ENST00000550828 SEPT1Q8WYJ6 367 aa15.19■□□□□ 0.02
ERBB3-215ENST00000550828 EIF2AK1Q9BQI3 630 aaKnown RBP15.19■□□□□ 0.02
ERBB3-215ENST00000550828 C16orf70Q9BSU1 422 aa15.19■□□□□ 0.02
ERBB3-215ENST00000550828 SCAND2PQ9GZW5 306 aaPredicted RBP15.19■□□□□ 0.02
ERBB3-215ENST00000550828 DISC1Q9NRI5 854 aa15.19■□□□□ 0.02
ERBB3-215ENST00000550828 OGDHLQ9ULD0 1010 aa15.19■□□□□ 0.02
ERBB3-215ENST00000550828 A0A087X0B3 334 aa15.18■□□□□ 0.02
ERBB3-215ENST00000550828 CUTAO60888 179 aa15.18■□□□□ 0.02
ERBB3-215ENST00000550828 STBD1O95210 358 aa15.18■□□□□ 0.02
ERBB3-215ENST00000550828 LGALS2P05162 132 aa15.18■□□□□ 0.02
ERBB3-215ENST00000550828 GJB1P08034 283 aa15.18■□□□□ 0.02
ERBB3-215ENST00000550828 ATP4AP20648 1035 aa15.18■□□□□ 0.02
ERBB3-215ENST00000550828 JAK3P52333 1124 aa15.18■□□□□ 0.02
ERBB3-215ENST00000550828 CYP4A11Q02928 519 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms