RNA–Protein interactions for RNA: ENST00000550587.5

DEPDC4-209, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,165 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-209ENST00000550587 MKI67P46013 3256 aaKnown RBP7.13□□□□□ -1.27
DEPDC4-209ENST00000550587 DOCK3Q8IZD9 2030 aa7.13□□□□□ -1.27
DEPDC4-209ENST00000550587 LOC285556D6RIA3 1793 aa7.13□□□□□ -1.27
DEPDC4-209ENST00000550587 PLIN4Q96Q06 1357 aa7.12□□□□□ -1.27
DEPDC4-209ENST00000550587 IGKV6D-41A0A0C4DH26 115 aa7.12□□□□□ -1.27
DEPDC4-209ENST00000550587 KBTBD13C9JR72 458 aa7.12□□□□□ -1.27
DEPDC4-209ENST00000550587 MPHOSPH10O00566 681 aaKnown RBP7.12□□□□□ -1.27
DEPDC4-209ENST00000550587 GNB5O14775 395 aa7.12□□□□□ -1.27
DEPDC4-209ENST00000550587 CPLX1O14810 134 aa7.12□□□□□ -1.27
DEPDC4-209ENST00000550587 STRNO43815 780 aa7.12□□□□□ -1.27
DEPDC4-209ENST00000550587 CDKL5O76039 1030 aa7.12□□□□□ -1.27
DEPDC4-209ENST00000550587 DDAH1O94760 285 aa7.12□□□□□ -1.27
DEPDC4-209ENST00000550587 BRD1O95696 1058 aa7.12□□□□□ -1.27
DEPDC4-209ENST00000550587 FURINP09958 794 aa7.12□□□□□ -1.27
DEPDC4-209ENST00000550587 TOP1P11387 765 aaKnown RBP7.12□□□□□ -1.27
DEPDC4-209ENST00000550587 SYT1P21579 422 aa7.12□□□□□ -1.27
DEPDC4-209ENST00000550587 DGKGP49619 791 aa7.12□□□□□ -1.27
DEPDC4-209ENST00000550587 NTRK3Q16288 839 aa7.12□□□□□ -1.27
DEPDC4-209ENST00000550587 MAP3K21Q5TCX8 1036 aa7.12□□□□□ -1.27
DEPDC4-209ENST00000550587 LARP1BQ659C4 914 aaKnown RBP7.12□□□□□ -1.27
DEPDC4-209ENST00000550587 CPLX2Q6PUV4 134 aaKnown RBP7.12□□□□□ -1.27
DEPDC4-209ENST00000550587 CATSPERGQ6ZRH7 1159 aa7.12□□□□□ -1.27
DEPDC4-209ENST00000550587 ALYREFQ86V81 257 aaKnown RBP7.12□□□□□ -1.27
DEPDC4-209ENST00000550587 RGS22Q8NE09 1264 aa7.12□□□□□ -1.27
DEPDC4-209ENST00000550587 NSUN7Q8NE18 718 aaKnown RBP7.12□□□□□ -1.27
DEPDC4-209ENST00000550587 MKL1Q969V6 931 aa7.12□□□□□ -1.27
DEPDC4-209ENST00000550587 KRTAP4-8Q9BYQ9 185 aa7.12□□□□□ -1.27
DEPDC4-209ENST00000550587 SENP6Q9GZR1 1112 aaPredicted RBP7.12□□□□□ -1.27
DEPDC4-209ENST00000550587 KIAA1683Q9H0B3 1180 aa7.12□□□□□ -1.27
DEPDC4-209ENST00000550587 SH2D4AQ9H788 454 aa7.12□□□□□ -1.27
DEPDC4-209ENST00000550587 DNAJC18Q9H819 358 aa7.12□□□□□ -1.27
DEPDC4-209ENST00000550587 KAT14Q9H8E8 782 aa7.12□□□□□ -1.27
DEPDC4-209ENST00000550587 NCOA5Q9HCD5 579 aaKnown RBP7.12□□□□□ -1.27
DEPDC4-209ENST00000550587 MTMR4Q9NYA4 1195 aa7.12□□□□□ -1.27
DEPDC4-209ENST00000550587 STXBP5LQ9Y2K9 1186 aa7.12□□□□□ -1.27
DEPDC4-209ENST00000550587 SIPA1L1O43166 1804 aa7.11□□□□□ -1.27
DEPDC4-209ENST00000550587 SZT2Q5T011 3432 aa7.11□□□□□ -1.27
DEPDC4-209ENST00000550587 GOLGA8AA7E2F4 631 aa7.11□□□□□ -1.27
DEPDC4-209ENST00000550587 SOX1O00570 391 aaPredicted RBP7.11□□□□□ -1.27
DEPDC4-209ENST00000550587 STX6O43752 255 aa7.11□□□□□ -1.27
DEPDC4-209ENST00000550587 TTLL1O95922 423 aa7.11□□□□□ -1.27
DEPDC4-209ENST00000550587 FDPSP14324 419 aaKnown RBP7.11□□□□□ -1.27
DEPDC4-209ENST00000550587 AKR1B1P15121 316 aa7.11□□□□□ -1.27
DEPDC4-209ENST00000550587 IFNAR1P17181 557 aa7.11□□□□□ -1.27
DEPDC4-209ENST00000550587 CDC27P30260 824 aa7.11□□□□□ -1.27
DEPDC4-209ENST00000550587 CCND3P30281 292 aaPredicted RBP7.11□□□□□ -1.27
DEPDC4-209ENST00000550587 SOX11P35716 441 aa7.11□□□□□ -1.27
DEPDC4-209ENST00000550587 MCM6Q14566 821 aa7.11□□□□□ -1.27
DEPDC4-209ENST00000550587 RRP1BQ14684 758 aaKnown RBP7.11□□□□□ -1.27
DEPDC4-209ENST00000550587 COG2Q14746 738 aa7.11□□□□□ -1.27
DEPDC4-209ENST00000550587 RTN1Q16799 776 aa7.11□□□□□ -1.27
DEPDC4-209ENST00000550587 CLEC17AQ6ZS10 378 aa7.11□□□□□ -1.27
DEPDC4-209ENST00000550587 CHSY3Q70JA7 882 aa7.11□□□□□ -1.27
DEPDC4-209ENST00000550587 FCHSD1Q86WN1 690 aa7.11□□□□□ -1.27
DEPDC4-209ENST00000550587 MICU3Q86XE3 530 aa7.11□□□□□ -1.27
DEPDC4-209ENST00000550587 MB21D1Q8N884 522 aa7.11□□□□□ -1.27
DEPDC4-209ENST00000550587 LPAR1Q92633 364 aa7.11□□□□□ -1.27
DEPDC4-209ENST00000550587 CEP95Q96GE4 821 aa7.11□□□□□ -1.27
DEPDC4-209ENST00000550587 C12orf42Q96LP6 360 aa7.11□□□□□ -1.27
DEPDC4-209ENST00000550587 TMEM47Q9BQJ4 181 aa7.11□□□□□ -1.27
DEPDC4-209ENST00000550587 MYL10Q9BUA6 226 aa7.11□□□□□ -1.27
DEPDC4-209ENST00000550587 PORCNQ9H237 461 aa7.11□□□□□ -1.27
DEPDC4-209ENST00000550587 KANSL2Q9H9L4 492 aa7.11□□□□□ -1.27
DEPDC4-209ENST00000550587 TXNRD2Q9NNW7 524 aa7.11□□□□□ -1.27
DEPDC4-209ENST00000550587 RBM28Q9NW13 759 aaKnown RBP7.11□□□□□ -1.27
DEPDC4-209ENST00000550587 NYAP2Q9P242 653 aa7.11□□□□□ -1.27
DEPDC4-209ENST00000550587 DDX20Q9UHI6 824 aaKnown RBP7.11□□□□□ -1.27
DEPDC4-209ENST00000550587 STX8Q9UNK0 236 aa7.11□□□□□ -1.27
DEPDC4-209ENST00000550587 ZDHHC9Q9Y397 364 aa7.11□□□□□ -1.27
DEPDC4-209ENST00000550587 COL6A3P12111 3177 aa7.1□□□□□ -1.27
DEPDC4-209ENST00000550587 PTPDC1A2A3K4 754 aa7.1□□□□□ -1.27
DEPDC4-209ENST00000550587 C1QTNF9BB2RNN3 333 aa7.1□□□□□ -1.27
DEPDC4-209ENST00000550587 DNM1LO00429 736 aa7.1□□□□□ -1.27
DEPDC4-209ENST00000550587 JAK2O60674 1132 aa7.1□□□□□ -1.27
DEPDC4-209ENST00000550587 ZSCAN22P10073 491 aaPredicted RBP7.1□□□□□ -1.27
DEPDC4-209ENST00000550587 COL6A1P12109 1028 aa7.1□□□□□ -1.27
DEPDC4-209ENST00000550587 SKIP12755 728 aa7.1□□□□□ -1.27
DEPDC4-209ENST00000550587 VCAM1P19320 739 aa7.1□□□□□ -1.27
DEPDC4-209ENST00000550587 RXRAP19793 462 aa7.1□□□□□ -1.27
DEPDC4-209ENST00000550587 ADH6P28332 368 aa7.1□□□□□ -1.27
DEPDC4-209ENST00000550587 SMARCA1P28370 1054 aa7.1□□□□□ -1.27
DEPDC4-209ENST00000550587 KIF5BP33176 963 aa7.1□□□□□ -1.27
DEPDC4-209ENST00000550587 TXLNAP40222 546 aa7.1□□□□□ -1.27
DEPDC4-209ENST00000550587 GNAQP50148 359 aa7.1□□□□□ -1.27
DEPDC4-209ENST00000550587 PCBP4P57723 403 aaKnown RBP7.1□□□□□ -1.27
DEPDC4-209ENST00000550587 SSRP1Q08945 709 aaKnown RBP7.1□□□□□ -1.27
DEPDC4-209ENST00000550587 PLS1Q14651 629 aa7.1□□□□□ -1.27
DEPDC4-209ENST00000550587 CCL14Q16627 93 aa7.1□□□□□ -1.27
DEPDC4-209ENST00000550587 LRRC26Q2I0M4 334 aa7.1□□□□□ -1.27
DEPDC4-209ENST00000550587 EML3Q32P44 896 aa7.1□□□□□ -1.27
DEPDC4-209ENST00000550587 LBX2Q6XYB7 198 aa7.1□□□□□ -1.27
DEPDC4-209ENST00000550587 TMEM179Q6ZVK1 233 aa7.1□□□□□ -1.27
DEPDC4-209ENST00000550587 FAM184AQ8NB25 1140 aa7.1□□□□□ -1.27
DEPDC4-209ENST00000550587 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.1□□□□□ -1.27
DEPDC4-209ENST00000550587 CTCFLQ8NI51 663 aaPredicted RBP7.1□□□□□ -1.27
DEPDC4-209ENST00000550587 NUP133Q8WUM0 1156 aa7.1□□□□□ -1.27
DEPDC4-209ENST00000550587 USP6NLQ92738 828 aa7.1□□□□□ -1.27
DEPDC4-209ENST00000550587 TNPO1Q92973 898 aaKnown RBP7.1□□□□□ -1.27
DEPDC4-209ENST00000550587 DDX11Q96FC9 970 aa7.1□□□□□ -1.27
DEPDC4-209ENST00000550587 LZTS2Q9BRK4 669 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms