RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 RPN1P04843 607 aaKnown RBP13.31□□□□□ -0.28
NR4A1-215ENST00000550557 ANXA13P27216 316 aa13.31□□□□□ -0.28
NR4A1-215ENST00000550557 SPECC1LQ69YQ0 1117 aa13.31□□□□□ -0.28
NR4A1-215ENST00000550557 DPF3Q92784 378 aa13.31□□□□□ -0.28
NR4A1-215ENST00000550557 MANSC4A6NHS7 340 aaPredicted RBP13.31□□□□□ -0.28
NR4A1-215ENST00000550557 CCDC122Q5T0U0 273 aa13.31□□□□□ -0.28
NR4A1-215ENST00000550557 USP50Q70EL3 339 aaPredicted RBP13.31□□□□□ -0.28
NR4A1-215ENST00000550557 FAM149B1Q96BN6 582 aa13.31□□□□□ -0.28
NR4A1-215ENST00000550557 GCOM2Q9BZD3 368 aaPredicted RBP13.31□□□□□ -0.28
NR4A1-215ENST00000550557 PIDD1Q9HB75 910 aa13.31□□□□□ -0.28
NR4A1-215ENST00000550557 GABBR1Q9UBS5 961 aa13.31□□□□□ -0.28
NR4A1-215ENST00000550557 NXF1Q9UBU9 619 aaKnown RBP13.31□□□□□ -0.28
NR4A1-215ENST00000550557 EXOSC10Q01780 885 aaKnown RBP13.31□□□□□ -0.28
NR4A1-215ENST00000550557 SURF1Q15526 300 aa13.31□□□□□ -0.28
NR4A1-215ENST00000550557 SFMBT2Q5VUG0 894 aa13.31□□□□□ -0.28
NR4A1-215ENST00000550557 SPTLC3Q9NUV7 552 aa13.31□□□□□ -0.28
NR4A1-215ENST00000550557 ATP8B3O60423 1300 aa13.31□□□□□ -0.28
NR4A1-215ENST00000550557 KLRK1P26718 216 aa13.3□□□□□ -0.28
NR4A1-215ENST00000550557 PRELPP51888 382 aa13.3□□□□□ -0.28
NR4A1-215ENST00000550557 PFKFB3Q16875 520 aaPredicted RBP13.3□□□□□ -0.28
NR4A1-215ENST00000550557 NT5C1BQ96P26 610 aa13.3□□□□□ -0.28
NR4A1-215ENST00000550557 EFCC1Q9HA90 598 aa13.3□□□□□ -0.28
NR4A1-215ENST00000550557 MYO1AQ9UBC5 1043 aa13.3□□□□□ -0.28
NR4A1-215ENST00000550557 NRXN3Q9Y4C0 1643 aa13.3□□□□□ -0.28
NR4A1-215ENST00000550557 PLA2G4BP0C869 781 aa13.3□□□□□ -0.28
NR4A1-215ENST00000550557 FERP16591 822 aa13.3□□□□□ -0.28
NR4A1-215ENST00000550557 ATP2A2P16615 1042 aaKnown RBP13.3□□□□□ -0.28
NR4A1-215ENST00000550557 ERCC5P28715 1186 aaPredicted RBP13.3□□□□□ -0.28
NR4A1-215ENST00000550557 PEX3P56589 373 aa13.3□□□□□ -0.28
NR4A1-215ENST00000550557 NBPF12Q5TAG4 269 aaPredicted RBP13.3□□□□□ -0.28
NR4A1-215ENST00000550557 CLEC10AQ8IUN9 316 aa13.3□□□□□ -0.28
NR4A1-215ENST00000550557 LSM14BQ9BX40 385 aaKnown RBP13.3□□□□□ -0.28
NR4A1-215ENST00000550557 NUCKS1Q9H1E3 243 aaKnown RBP13.3□□□□□ -0.28
NR4A1-215ENST00000550557 GGPS1O95749 300 aa13.3□□□□□ -0.28
NR4A1-215ENST00000550557 RNASE9P60153 205 aaKnown RBP13.3□□□□□ -0.28
NR4A1-215ENST00000550557 SLFN12LQ6IEE8 588 aa13.3□□□□□ -0.28
NR4A1-215ENST00000550557 TRIML1Q8N9V2 468 aa13.3□□□□□ -0.28
NR4A1-215ENST00000550557 FAM20AQ96MK3 541 aa13.3□□□□□ -0.28
NR4A1-215ENST00000550557 MSTO1Q9BUK6 570 aa13.3□□□□□ -0.28
NR4A1-215ENST00000550557 PCIF1Q9H4Z3 704 aa13.3□□□□□ -0.28
NR4A1-215ENST00000550557 VPS18Q9P253 973 aa13.3□□□□□ -0.28
NR4A1-215ENST00000550557 IPO5O00410 1097 aaKnown RBP13.3□□□□□ -0.28
NR4A1-215ENST00000550557 GH1P01241 217 aa13.3□□□□□ -0.28
NR4A1-215ENST00000550557 CDC25AP30304 524 aa13.3□□□□□ -0.28
NR4A1-215ENST00000550557 SBK1Q52WX2 424 aa13.3□□□□□ -0.28
NR4A1-215ENST00000550557 MAATS1Q7Z4T9 603 aa13.3□□□□□ -0.28
NR4A1-215ENST00000550557 GABPB2Q8TAK5 448 aaPredicted RBP13.3□□□□□ -0.28
NR4A1-215ENST00000550557 SYNJ2BP-COX16A0A087WUM0 186 aa13.29□□□□□ -0.28
NR4A1-215ENST00000550557 NR2F2P24468 414 aa13.29□□□□□ -0.28
NR4A1-215ENST00000550557 CYB5R4Q7L1T6 521 aa13.29□□□□□ -0.28
NR4A1-215ENST00000550557 HDXQ7Z353 690 aa13.29□□□□□ -0.28
NR4A1-215ENST00000550557 UBL4BQ8N7F7 174 aa13.29□□□□□ -0.28
NR4A1-215ENST00000550557 GSDMBQ8TAX9 411 aa13.29□□□□□ -0.28
NR4A1-215ENST00000550557 ATG4CQ96DT6 458 aa13.29□□□□□ -0.28
NR4A1-215ENST00000550557 TSGA10Q9BZW7 698 aa13.29□□□□□ -0.28
NR4A1-215ENST00000550557 COX16Q9P0S2 106 aa13.29□□□□□ -0.28
NR4A1-215ENST00000550557 TRPA1O75762 1119 aa13.29□□□□□ -0.28
NR4A1-215ENST00000550557 CAPN2P17655 700 aa13.29□□□□□ -0.28
NR4A1-215ENST00000550557 ERCC6LQ2NKX8 1250 aa13.29□□□□□ -0.28
NR4A1-215ENST00000550557 TTBK2Q6IQ55 1244 aa13.29□□□□□ -0.28
NR4A1-215ENST00000550557 RHPN2Q8IUC4 686 aa13.29□□□□□ -0.28
NR4A1-215ENST00000550557 ELMOD1Q8N336 334 aa13.29□□□□□ -0.28
NR4A1-215ENST00000550557 CHST13Q8NET6 341 aa13.29□□□□□ -0.28
NR4A1-215ENST00000550557 ZDHHC15Q96MV8 337 aa13.29□□□□□ -0.28
NR4A1-215ENST00000550557 PHLPP2Q6ZVD8 1323 aa13.29□□□□□ -0.28
NR4A1-215ENST00000550557 DISP2A7MBM2 1401 aa13.29□□□□□ -0.28
NR4A1-215ENST00000550557 PDE6CP51160 858 aa13.29□□□□□ -0.28
NR4A1-215ENST00000550557 CALCOCO2Q13137 446 aa13.29□□□□□ -0.28
NR4A1-215ENST00000550557 C1orf228Q6PIY5 440 aa13.29□□□□□ -0.28
NR4A1-215ENST00000550557 RRAGAQ7L523 313 aa13.29□□□□□ -0.28
NR4A1-215ENST00000550557 TRIM50Q86XT4 487 aa13.29□□□□□ -0.28
NR4A1-215ENST00000550557 BANK1Q8NDB2 785 aa13.29□□□□□ -0.28
NR4A1-215ENST00000550557 PIGOQ8TEQ8 1089 aa13.29□□□□□ -0.28
NR4A1-215ENST00000550557 DPF2Q92785 391 aa13.29□□□□□ -0.28
NR4A1-215ENST00000550557 ZNF512BQ96KM6 892 aaPredicted RBP13.29□□□□□ -0.28
NR4A1-215ENST00000550557 SYT17Q9BSW7 474 aa13.29□□□□□ -0.28
NR4A1-215ENST00000550557 RGL2O15211 777 aa13.29□□□□□ -0.28
NR4A1-215ENST00000550557 RHOXF2BP0C7M4 288 aa13.29□□□□□ -0.28
NR4A1-215ENST00000550557 PTK2Q05397 1052 aa13.29□□□□□ -0.28
NR4A1-215ENST00000550557 OPTNQ96CV9 577 aa13.29□□□□□ -0.28
NR4A1-215ENST00000550557 AIFM3Q96NN9 605 aa13.29□□□□□ -0.28
NR4A1-215ENST00000550557 RHOXF2Q9BQY4 288 aa13.29□□□□□ -0.28
NR4A1-215ENST00000550557 SLC9A2Q9UBY0 812 aa13.29□□□□□ -0.28
NR4A1-215ENST00000550557 CPA4Q9UI42 421 aa13.29□□□□□ -0.28
NR4A1-215ENST00000550557 PFASO15067 1338 aa13.29□□□□□ -0.28
NR4A1-215ENST00000550557 PSMC2P35998 433 aaKnown RBP13.28□□□□□ -0.28
NR4A1-215ENST00000550557 MAGEA1P43355 309 aa13.28□□□□□ -0.28
NR4A1-215ENST00000550557 QARSP47897 775 aaKnown RBP13.28□□□□□ -0.28
NR4A1-215ENST00000550557 BPIFB4P59827 614 aa13.28□□□□□ -0.28
NR4A1-215ENST00000550557 DEFB115Q30KQ5 88 aa13.28□□□□□ -0.28
NR4A1-215ENST00000550557 PLEKHH3Q7Z736 793 aa13.28□□□□□ -0.28
NR4A1-215ENST00000550557 SCFD2Q8WU76 684 aa13.28□□□□□ -0.28
NR4A1-215ENST00000550557 LRRC4Q9HBW1 653 aa13.28□□□□□ -0.28
NR4A1-215ENST00000550557 XPAP23025 273 aaPredicted RBP13.28□□□□□ -0.28
NR4A1-215ENST00000550557 CAP2P40123 477 aa13.28□□□□□ -0.28
NR4A1-215ENST00000550557 STAT5BP51692 787 aa13.28□□□□□ -0.28
NR4A1-215ENST00000550557 ZNF543Q08ER8 600 aa13.28□□□□□ -0.28
NR4A1-215ENST00000550557 DPCR1Q3MIW9 517 aa13.28□□□□□ -0.28
NR4A1-215ENST00000550557 CEP57Q86XR8 500 aa13.28□□□□□ -0.28
NR4A1-215ENST00000550557 FAM186BQ8IYM0 893 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms