RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 PPP2R5CQ13362 524 aa14.73□□□□□ -0.05
RAB5C-206ENST00000550406 ZNF746Q6NUN9 644 aaPredicted RBP14.73□□□□□ -0.05
RAB5C-206ENST00000550406 UBE2Q1Q7Z7E8 422 aa14.73□□□□□ -0.05
RAB5C-206ENST00000550406 RNF180Q86T96 592 aa14.73□□□□□ -0.05
RAB5C-206ENST00000550406 SLFN12Q8IYM2 578 aa14.73□□□□□ -0.05
RAB5C-206ENST00000550406 SEPT1Q8WYJ6 367 aa14.73□□□□□ -0.05
RAB5C-206ENST00000550406 KAT2BQ92831 832 aa14.73□□□□□ -0.05
RAB5C-206ENST00000550406 C16orf70Q9BSU1 422 aa14.73□□□□□ -0.05
RAB5C-206ENST00000550406 TSEN34Q9BSV6 310 aaKnown RBP14.73□□□□□ -0.05
RAB5C-206ENST00000550406 TEKT3Q9BXF9 490 aa14.73□□□□□ -0.05
RAB5C-206ENST00000550406 SPC25Q9HBM1 224 aa14.73□□□□□ -0.05
RAB5C-206ENST00000550406 CIZ1Q9ULV3 898 aaPredicted RBP14.73□□□□□ -0.05
RAB5C-206ENST00000550406 PHF24Q9UPV7 400 aa14.73□□□□□ -0.05
RAB5C-206ENST00000550406 ELP1O95163 1332 aa14.72□□□□□ -0.05
RAB5C-206ENST00000550406 KAT6AQ92794 2004 aa14.72□□□□□ -0.05
RAB5C-206ENST00000550406 PPFIA4O75335 1185 aa14.72□□□□□ -0.05
RAB5C-206ENST00000550406 BAG4O95429 457 aaKnown RBP14.72□□□□□ -0.05
RAB5C-206ENST00000550406 MYL3P08590 195 aa14.72□□□□□ -0.05
RAB5C-206ENST00000550406 COL6A1P12109 1028 aa14.72□□□□□ -0.05
RAB5C-206ENST00000550406 TCF7P36402 384 aaPredicted RBP14.72□□□□□ -0.05
RAB5C-206ENST00000550406 NASPP49321 788 aaPredicted RBP14.72□□□□□ -0.05
RAB5C-206ENST00000550406 CPT1AP50416 773 aa14.72□□□□□ -0.05
RAB5C-206ENST00000550406 ACLYP53396 1101 aa14.72□□□□□ -0.05
RAB5C-206ENST00000550406 NUCB2P80303 420 aa14.72□□□□□ -0.05
RAB5C-206ENST00000550406 PURAQ00577 322 aaKnown RBP14.72□□□□□ -0.05
RAB5C-206ENST00000550406 KRT76Q01546 638 aa14.72□□□□□ -0.05
RAB5C-206ENST00000550406 CEBPZQ03701 1054 aaKnown RBP14.72□□□□□ -0.05
RAB5C-206ENST00000550406 DNM1Q05193 864 aaKnown RBP14.72□□□□□ -0.05
RAB5C-206ENST00000550406 ANKLE1Q8NAG6 615 aa14.72□□□□□ -0.05
RAB5C-206ENST00000550406 TTC12Q9H892 705 aaPredicted RBP14.72□□□□□ -0.05
RAB5C-206ENST00000550406 PCDHA12Q9UN75 941 aa14.72□□□□□ -0.05
RAB5C-206ENST00000550406 GRIN2DO15399 1336 aa14.71□□□□□ -0.05
RAB5C-206ENST00000550406 NOP56O00567 594 aaKnown RBP14.71□□□□□ -0.05
RAB5C-206ENST00000550406 CHMP2AO43633 222 aa14.71□□□□□ -0.05
RAB5C-206ENST00000550406 MARCH6O60337 910 aa14.71□□□□□ -0.05
RAB5C-206ENST00000550406 LGR5O75473 907 aa14.71□□□□□ -0.05
RAB5C-206ENST00000550406 LGALS2P05162 132 aa14.71□□□□□ -0.05
RAB5C-206ENST00000550406 SUPT20HL2P0C7V6 817 aa14.71□□□□□ -0.05
RAB5C-206ENST00000550406 ZNF286BP0CG31 522 aa14.71□□□□□ -0.05
RAB5C-206ENST00000550406 CAPN2P17655 700 aa14.71□□□□□ -0.05
RAB5C-206ENST00000550406 PRPHP41219 470 aa14.71□□□□□ -0.05
RAB5C-206ENST00000550406 TECP42680 631 aa14.71□□□□□ -0.05
RAB5C-206ENST00000550406 GRIN1Q05586 938 aa14.71□□□□□ -0.05
RAB5C-206ENST00000550406 DGKDQ16760 1214 aa14.71□□□□□ -0.05
RAB5C-206ENST00000550406 UTP14CQ5TAP6 766 aaKnown RBP14.71□□□□□ -0.05
RAB5C-206ENST00000550406 CXCL17Q6UXB2 119 aa14.71□□□□□ -0.05
RAB5C-206ENST00000550406 PCSK9Q8NBP7 692 aaKnown RBP14.71□□□□□ -0.05
RAB5C-206ENST00000550406 PPP1R13LQ8WUF5 828 aa14.71□□□□□ -0.05
RAB5C-206ENST00000550406 FERMT2Q96AC1 680 aa14.71□□□□□ -0.05
RAB5C-206ENST00000550406 PAWRQ96IZ0 340 aaKnown RBP14.71□□□□□ -0.05
RAB5C-206ENST00000550406 DISC1Q9NRI5 854 aa14.71□□□□□ -0.05
RAB5C-206ENST00000550406 POLR3EQ9NVU0 708 aa14.71□□□□□ -0.05
RAB5C-206ENST00000550406 A0A1W2PQ45 241 aaPredicted RBP14.7□□□□□ -0.06
RAB5C-206ENST00000550406 A0A1W2PQY0 241 aa14.7□□□□□ -0.06
RAB5C-206ENST00000550406 MOXD2PA6NHM9 499 aa14.7□□□□□ -0.06
RAB5C-206ENST00000550406 POTEMA6NI47 508 aa14.7□□□□□ -0.06
RAB5C-206ENST00000550406 KBTBD13C9JR72 458 aa14.7□□□□□ -0.06
RAB5C-206ENST00000550406 HAS3O00219 553 aa14.7□□□□□ -0.06
RAB5C-206ENST00000550406 LAD1O00515 517 aa14.7□□□□□ -0.06
RAB5C-206ENST00000550406 KPNA6O60684 536 aa14.7□□□□□ -0.06
RAB5C-206ENST00000550406 ATP4AP20648 1035 aa14.7□□□□□ -0.06
RAB5C-206ENST00000550406 FXR2P51116 673 aaKnown RBP eCLIP14.7□□□□□ -0.06
RAB5C-206ENST00000550406 PSMC6P62333 389 aa14.7□□□□□ -0.06
RAB5C-206ENST00000550406 SLC39A14Q15043 492 aa14.7□□□□□ -0.06
RAB5C-206ENST00000550406 MIER3Q7Z3K6 550 aa14.7□□□□□ -0.06
RAB5C-206ENST00000550406 TRIM50Q86XT4 487 aa14.7□□□□□ -0.06
RAB5C-206ENST00000550406 CCDC60Q8IWA6 550 aaPredicted RBP14.7□□□□□ -0.06
RAB5C-206ENST00000550406 SMAP1Q8IYB5 467 aaPredicted RBP14.7□□□□□ -0.06
RAB5C-206ENST00000550406 LINC00301Q8NCQ3 95 aa14.7□□□□□ -0.06
RAB5C-206ENST00000550406 ZNF396Q96N95 335 aaPredicted RBP14.7□□□□□ -0.06
RAB5C-206ENST00000550406 PCDHA10Q9Y5I2 948 aa14.7□□□□□ -0.06
RAB5C-206ENST00000550406 EMSYQ7Z589 1322 aa14.69□□□□□ -0.06
RAB5C-206ENST00000550406 WDR64B1ANS9 1081 aa14.69□□□□□ -0.06
RAB5C-206ENST00000550406 ZEB2O60315 1214 aa14.69□□□□□ -0.06
RAB5C-206ENST00000550406 MARCKSP29966 332 aaPredicted RBP14.69□□□□□ -0.06
RAB5C-206ENST00000550406 EPHA7Q15375 998 aa14.69□□□□□ -0.06
RAB5C-206ENST00000550406 UGCGQ16739 394 aa14.69□□□□□ -0.06
RAB5C-206ENST00000550406 BRDTQ58F21 947 aaPredicted RBP14.69□□□□□ -0.06
RAB5C-206ENST00000550406 ARL6IP4Q66PJ3 421 aaKnown RBP14.69□□□□□ -0.06
RAB5C-206ENST00000550406 NCAPH2Q6IBW4 605 aa14.69□□□□□ -0.06
RAB5C-206ENST00000550406 SWSAP1Q6NVH7 229 aa14.69□□□□□ -0.06
RAB5C-206ENST00000550406 IGSF22Q8N9C0 903 aa14.69□□□□□ -0.06
RAB5C-206ENST00000550406 RDM1Q8NG50 284 aa14.69□□□□□ -0.06
RAB5C-206ENST00000550406 MTG1Q9BT17 334 aaPredicted RBP14.69□□□□□ -0.06
RAB5C-206ENST00000550406 CHMP5Q9NZZ3 219 aa14.69□□□□□ -0.06
RAB5C-206ENST00000550406 FBXO2Q9UK22 296 aaPredicted RBP14.69□□□□□ -0.06
RAB5C-206ENST00000550406 MORC2Q9Y6X9 1032 aaPredicted RBP14.69□□□□□ -0.06
RAB5C-206ENST00000550406 PP2D1A8MPX8 630 aa14.68□□□□□ -0.06
RAB5C-206ENST00000550406 H3BRB1 525 aa14.68□□□□□ -0.06
RAB5C-206ENST00000550406 ZNF862O60290 1169 aa14.68□□□□□ -0.06
RAB5C-206ENST00000550406 STBD1O95210 358 aa14.68□□□□□ -0.06
RAB5C-206ENST00000550406 BMP15O95972 392 aa14.68□□□□□ -0.06
RAB5C-206ENST00000550406 F2P00734 622 aa14.68□□□□□ -0.06
RAB5C-206ENST00000550406 PSAPP07602 524 aa14.68□□□□□ -0.06
RAB5C-206ENST00000550406 SFNP31947 248 aa14.68□□□□□ -0.06
RAB5C-206ENST00000550406 PSEN2P49810 448 aa14.68□□□□□ -0.06
RAB5C-206ENST00000550406 JAK3P52333 1124 aa14.68□□□□□ -0.06
RAB5C-206ENST00000550406 PDIA5Q14554 519 aa14.68□□□□□ -0.06
RAB5C-206ENST00000550406 ATL3Q6DD88 541 aa14.68□□□□□ -0.06
RAB5C-206ENST00000550406 MIS18BP1Q6P0N0 1132 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms