RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 EFCAB14O75071 495 aa15.37■□□□□ 0.05
NUP188-211ENST00000550219 CALM1P0DP23 149 aa15.37■□□□□ 0.05
NUP188-211ENST00000550219 CALM2P0DP24 149 aa15.37■□□□□ 0.05
NUP188-211ENST00000550219 CALM3P0DP25 149 aa15.37■□□□□ 0.05
NUP188-211ENST00000550219 TFF2Q03403 129 aa15.37■□□□□ 0.05
NUP188-211ENST00000550219 GRB10Q13322 594 aa15.37■□□□□ 0.05
NUP188-211ENST00000550219 TOB2Q14106 344 aaPredicted RBP15.37■□□□□ 0.05
NUP188-211ENST00000550219 SGMS1Q86VZ5 419 aa15.37■□□□□ 0.05
NUP188-211ENST00000550219 MYOCDQ8IZQ8 938 aa15.37■□□□□ 0.05
NUP188-211ENST00000550219 TMTC2Q8N394 836 aa15.37■□□□□ 0.05
NUP188-211ENST00000550219 DBF4BQ8NFT6 615 aa15.37■□□□□ 0.05
NUP188-211ENST00000550219 UHRF1Q96T88 793 aaPredicted RBP15.37■□□□□ 0.05
NUP188-211ENST00000550219 RNPEPQ9H4A4 650 aa15.37■□□□□ 0.05
NUP188-211ENST00000550219 SETD4Q9NVD3 440 aa15.37■□□□□ 0.05
NUP188-211ENST00000550219 EMSYQ7Z589 1322 aa15.37■□□□□ 0.05
NUP188-211ENST00000550219 PIK3CDO00329 1044 aa15.36■□□□□ 0.05
NUP188-211ENST00000550219 GJB5O95377 273 aa15.36■□□□□ 0.05
NUP188-211ENST00000550219 EVCP57679 992 aa15.36■□□□□ 0.05
NUP188-211ENST00000550219 ARHGAP4P98171 946 aa15.36■□□□□ 0.05
NUP188-211ENST00000550219 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.36■□□□□ 0.05
NUP188-211ENST00000550219 Q6ZUG5 572 aa15.36■□□□□ 0.05
NUP188-211ENST00000550219 TMTC3Q6ZXV5 915 aa15.36■□□□□ 0.05
NUP188-211ENST00000550219 PSTPIP2Q9H939 334 aa15.36■□□□□ 0.05
NUP188-211ENST00000550219 SPDYE3A6NKU9 549 aa15.35■□□□□ 0.05
NUP188-211ENST00000550219 AMHP03971 560 aa15.35■□□□□ 0.05
NUP188-211ENST00000550219 MARK3P27448 753 aa15.35■□□□□ 0.05
NUP188-211ENST00000550219 SMARCA1P28370 1054 aa15.35■□□□□ 0.05
NUP188-211ENST00000550219 HOXC8P31273 242 aa15.35■□□□□ 0.05
NUP188-211ENST00000550219 AK2P54819 239 aa15.35■□□□□ 0.05
NUP188-211ENST00000550219 ANKRD1Q15327 319 aa15.35■□□□□ 0.05
NUP188-211ENST00000550219 XRRA1Q6P2D8 792 aa15.35■□□□□ 0.05
NUP188-211ENST00000550219 SYNE3Q6ZMZ3 975 aa15.35■□□□□ 0.05
NUP188-211ENST00000550219 LMBR1Q8WVP7 490 aa15.35■□□□□ 0.05
NUP188-211ENST00000550219 NECAB3Q96P71 396 aaPredicted RBP15.35■□□□□ 0.05
NUP188-211ENST00000550219 RAD9AQ99638 391 aa15.35■□□□□ 0.05
NUP188-211ENST00000550219 TSHZ2Q9NRE2 1034 aa15.35■□□□□ 0.05
NUP188-211ENST00000550219 CNTNAP5Q8WYK1 1306 aa15.35■□□□□ 0.05
NUP188-211ENST00000550219 VCANP13611 3396 aa15.34■□□□□ 0.05
NUP188-211ENST00000550219 LINC01553A4QN01 128 aa15.34■□□□□ 0.05
NUP188-211ENST00000550219 GNAT1P11488 350 aa15.34■□□□□ 0.05
NUP188-211ENST00000550219 TCF7P36402 384 aaPredicted RBP15.34■□□□□ 0.05
NUP188-211ENST00000550219 KCNQ1P51787 676 aa15.34■□□□□ 0.05
NUP188-211ENST00000550219 MTMR1Q13613 665 aa15.34■□□□□ 0.05
NUP188-211ENST00000550219 FANCBQ8NB91 859 aa15.34■□□□□ 0.05
NUP188-211ENST00000550219 SEPT8Q92599 483 aa15.34■□□□□ 0.05
NUP188-211ENST00000550219 GPRASP2Q96D09 838 aa15.34■□□□□ 0.05
NUP188-211ENST00000550219 PGBD1Q96JS3 809 aa15.34■□□□□ 0.05
NUP188-211ENST00000550219 NAP1L2Q9ULW6 460 aaPredicted RBP15.34■□□□□ 0.05
NUP188-211ENST00000550219 CHD7Q9P2D1 2997 aa15.34■□□□□ 0.05
NUP188-211ENST00000550219 ST18O60284 1047 aa15.33■□□□□ 0.04
NUP188-211ENST00000550219 LPXNO60711 386 aa15.33■□□□□ 0.04
NUP188-211ENST00000550219 ATP9AO75110 1047 aa15.33■□□□□ 0.04
NUP188-211ENST00000550219 KCNA2P16389 499 aa15.33■□□□□ 0.04
NUP188-211ENST00000550219 POU3F3P20264 500 aaPredicted RBP15.33■□□□□ 0.04
NUP188-211ENST00000550219 NAPAP54920 295 aa15.33■□□□□ 0.04
NUP188-211ENST00000550219 PLEKHG4Q58EX7 1191 aa15.33■□□□□ 0.04
NUP188-211ENST00000550219 WWC2Q6AWC2 1192 aa15.33■□□□□ 0.04
NUP188-211ENST00000550219 APOA5Q6Q788 366 aa15.33■□□□□ 0.04
NUP188-211ENST00000550219 GIMAP8Q8ND71 665 aaPredicted RBP15.33■□□□□ 0.04
NUP188-211ENST00000550219 BRF1Q92994 677 aa15.33■□□□□ 0.04
NUP188-211ENST00000550219 SNX21Q969T3 373 aa15.33■□□□□ 0.04
NUP188-211ENST00000550219 CDHR1Q96JP9 859 aa15.33■□□□□ 0.04
NUP188-211ENST00000550219 TGS1Q96RS0 853 aaKnown RBP15.33■□□□□ 0.04
NUP188-211ENST00000550219 SENP7Q9BQF6 1050 aa15.33■□□□□ 0.04
NUP188-211ENST00000550219 OSBPL7Q9BZF2 842 aa15.33■□□□□ 0.04
NUP188-211ENST00000550219 EHMT1Q9H9B1 1298 aa15.33■□□□□ 0.04
NUP188-211ENST00000550219 BRPF3Q9ULD4 1205 aa15.33■□□□□ 0.04
NUP188-211ENST00000550219 PCDHA6Q9UN73 950 aa15.33■□□□□ 0.04
NUP188-211ENST00000550219 PCDHA8Q9Y5H6 950 aa15.33■□□□□ 0.04
NUP188-211ENST00000550219 MICAL3Q7RTP6 2002 aa15.33■□□□□ 0.04
NUP188-211ENST00000550219 MYO9BQ13459 2157 aa15.32■□□□□ 0.04
NUP188-211ENST00000550219 SIP14410 1827 aa15.32■□□□□ 0.04
NUP188-211ENST00000550219 SPTBN5Q9NRC6 3674 aaKnown RBP15.32■□□□□ 0.04
NUP188-211ENST00000550219 CAND2O75155 1236 aa15.32■□□□□ 0.04
NUP188-211ENST00000550219 UPP2O95045 317 aa15.32■□□□□ 0.04
NUP188-211ENST00000550219 CD2BP2O95400 341 aaKnown RBP15.32■□□□□ 0.04
NUP188-211ENST00000550219 ITGB5P18084 799 aa15.32■□□□□ 0.04
NUP188-211ENST00000550219 MCM2P49736 904 aa15.32■□□□□ 0.04
NUP188-211ENST00000550219 RCAN1P53805 252 aa15.32■□□□□ 0.04
NUP188-211ENST00000550219 FGD1P98174 961 aa15.32■□□□□ 0.04
NUP188-211ENST00000550219 PPFIA1Q13136 1202 aa15.32■□□□□ 0.04
NUP188-211ENST00000550219 RTN1Q16799 776 aa15.32■□□□□ 0.04
NUP188-211ENST00000550219 AAK1Q2M2I8 961 aa15.32■□□□□ 0.04
NUP188-211ENST00000550219 GLG1Q92896 1179 aa15.32■□□□□ 0.04
NUP188-211ENST00000550219 ZNF274Q96GC6 653 aaPredicted RBP15.32■□□□□ 0.04
NUP188-211ENST00000550219 C17orf80Q9BSJ5 609 aa15.32■□□□□ 0.04
NUP188-211ENST00000550219 SUGCTQ9HAC7 445 aa15.32■□□□□ 0.04
NUP188-211ENST00000550219 RBM28Q9NW13 759 aaKnown RBP15.32■□□□□ 0.04
NUP188-211ENST00000550219 UBIAD1Q9Y5Z9 338 aa15.32■□□□□ 0.04
NUP188-211ENST00000550219 GOLGA8AA7E2F4 631 aa15.31■□□□□ 0.04
NUP188-211ENST00000550219 GOLGA8BA8MQT2 603 aa15.31■□□□□ 0.04
NUP188-211ENST00000550219 ZBTB43O43298 467 aa15.31■□□□□ 0.04
NUP188-211ENST00000550219 ERVK-21P61565 698 aa15.31■□□□□ 0.04
NUP188-211ENST00000550219 IGBP1P78318 339 aa15.31■□□□□ 0.04
NUP188-211ENST00000550219 APOBRQ0VD83 1088 aa15.31■□□□□ 0.04
NUP188-211ENST00000550219 RUFY4Q6ZNE9 571 aa15.31■□□□□ 0.04
NUP188-211ENST00000550219 FBXO22Q8NEZ5 403 aa15.31■□□□□ 0.04
NUP188-211ENST00000550219 YME1L1Q96TA2 773 aa15.31■□□□□ 0.04
NUP188-211ENST00000550219 TPCN1Q9ULQ1 816 aa15.31■□□□□ 0.04
NUP188-211ENST00000550219 LIMCH1Q9UPQ0 1083 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms