RNA–Protein interactions for RNA: ENST00000550100.5

LETMD1-221, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 1,480 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-221ENST00000550100 CYP3A4P08684 503 aa13.48□□□□□ -0.25
LETMD1-221ENST00000550100 ADAM17P78536 824 aa13.48□□□□□ -0.25
LETMD1-221ENST00000550100 SSRP1Q08945 709 aaKnown RBP13.48□□□□□ -0.25
LETMD1-221ENST00000550100 AP3B2Q13367 1082 aa13.48□□□□□ -0.25
LETMD1-221ENST00000550100 ZNF618Q5T7W0 954 aa13.48□□□□□ -0.25
LETMD1-221ENST00000550100 PSRC1Q6PGN9 363 aaPredicted RBP13.48□□□□□ -0.25
LETMD1-221ENST00000550100 KIF2CQ99661 725 aa13.48□□□□□ -0.25
LETMD1-221ENST00000550100 KATNAL1Q9BW62 490 aa13.48□□□□□ -0.25
LETMD1-221ENST00000550100 C6orf50Q9HD87 102 aa13.48□□□□□ -0.25
LETMD1-221ENST00000550100 NOD1Q9Y239 953 aa13.48□□□□□ -0.25
LETMD1-221ENST00000550100 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.47□□□□□ -0.25
LETMD1-221ENST00000550100 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.47□□□□□ -0.25
LETMD1-221ENST00000550100 M0R2N6 131 aa13.47□□□□□ -0.25
LETMD1-221ENST00000550100 MYOGP15173 224 aa13.47□□□□□ -0.25
LETMD1-221ENST00000550100 MARK3P27448 753 aa13.47□□□□□ -0.25
LETMD1-221ENST00000550100 RABGGTBP53611 331 aa13.47□□□□□ -0.25
LETMD1-221ENST00000550100 RBL2Q08999 1139 aa13.47□□□□□ -0.25
LETMD1-221ENST00000550100 ST3GAL1Q11201 340 aa13.47□□□□□ -0.25
LETMD1-221ENST00000550100 PTK7Q13308 1070 aa13.47□□□□□ -0.25
LETMD1-221ENST00000550100 BFSP2Q13515 415 aa13.47□□□□□ -0.25
LETMD1-221ENST00000550100 ME3Q16798 604 aa13.47□□□□□ -0.25
LETMD1-221ENST00000550100 MARCH8Q5T0T0 291 aa13.47□□□□□ -0.25
LETMD1-221ENST00000550100 SERINC5Q86VE9 423 aa13.47□□□□□ -0.25
LETMD1-221ENST00000550100 REXO1Q8N1G1 1221 aaKnown RBP13.47□□□□□ -0.25
LETMD1-221ENST00000550100 RETREG2Q8NC44 543 aa13.47□□□□□ -0.25
LETMD1-221ENST00000550100 SEPT1Q8WYJ6 367 aa13.47□□□□□ -0.25
LETMD1-221ENST00000550100 LENG9Q96B70 501 aa13.47□□□□□ -0.25
LETMD1-221ENST00000550100 PBX4Q9BYU1 374 aa13.47□□□□□ -0.25
LETMD1-221ENST00000550100 YBX2Q9Y2T7 364 aaKnown RBP13.47□□□□□ -0.25
LETMD1-221ENST00000550100 TANC1Q9C0D5 1861 aa13.47□□□□□ -0.25
LETMD1-221ENST00000550100 GBF1Q92538 1859 aa13.46□□□□□ -0.25
LETMD1-221ENST00000550100 C17orf102A2RUQ5 167 aa13.46□□□□□ -0.25
LETMD1-221ENST00000550100 MAFGO15525 162 aa13.46□□□□□ -0.25
LETMD1-221ENST00000550100 LGR5O75473 907 aa13.46□□□□□ -0.25
LETMD1-221ENST00000550100 FDPSP14324 419 aaKnown RBP13.46□□□□□ -0.25
LETMD1-221ENST00000550100 SELPP16109 830 aa13.46□□□□□ -0.25
LETMD1-221ENST00000550100 ACTR2P61160 394 aa13.46□□□□□ -0.25
LETMD1-221ENST00000550100 AKAP17AQ02040 695 aaKnown RBP13.46□□□□□ -0.25
LETMD1-221ENST00000550100 RUFY4Q6ZNE9 571 aa13.46□□□□□ -0.25
LETMD1-221ENST00000550100 LRRC8DQ7L1W4 858 aa13.46□□□□□ -0.25
LETMD1-221ENST00000550100 PLA2G4DQ86XP0 818 aa13.46□□□□□ -0.25
LETMD1-221ENST00000550100 TEX2Q8IWB9 1127 aa13.46□□□□□ -0.25
LETMD1-221ENST00000550100 RPUSD2Q8IZ73 545 aaKnown RBP13.46□□□□□ -0.25
LETMD1-221ENST00000550100 GIMAP8Q8ND71 665 aaPredicted RBP13.46□□□□□ -0.25
LETMD1-221ENST00000550100 LMBR1Q8WVP7 490 aa13.46□□□□□ -0.25
LETMD1-221ENST00000550100 ATP6V0A1Q93050 837 aa13.46□□□□□ -0.25
LETMD1-221ENST00000550100 GJA10Q969M2 543 aa13.46□□□□□ -0.25
LETMD1-221ENST00000550100 CDHR1Q96JP9 859 aa13.46□□□□□ -0.25
LETMD1-221ENST00000550100 GLT8D2Q9H1C3 349 aa13.46□□□□□ -0.25
LETMD1-221ENST00000550100 EHMT1Q9H9B1 1298 aa13.46□□□□□ -0.25
LETMD1-221ENST00000550100 JPH1Q9HDC5 661 aaPredicted RBP13.46□□□□□ -0.25
LETMD1-221ENST00000550100 SLC9A2Q9UBY0 812 aa13.46□□□□□ -0.25
LETMD1-221ENST00000550100 KCNJ14Q9UNX9 436 aa13.46□□□□□ -0.25
LETMD1-221ENST00000550100 DDX39AO00148 427 aaKnown RBP13.45□□□□□ -0.26
LETMD1-221ENST00000550100 ATG7O95352 703 aa13.45□□□□□ -0.26
LETMD1-221ENST00000550100 DNAJB2P25686 324 aa13.45□□□□□ -0.26
LETMD1-221ENST00000550100 NLRP5P59047 1200 aa13.45□□□□□ -0.26
LETMD1-221ENST00000550100 NIPA1Q7RTP0 329 aa13.45□□□□□ -0.26
LETMD1-221ENST00000550100 TMCO2Q7Z6W1 182 aaPredicted RBP13.45□□□□□ -0.26
LETMD1-221ENST00000550100 CAGE1Q8TC20 777 aa13.45□□□□□ -0.26
LETMD1-221ENST00000550100 AFAP1L1Q8TED9 768 aa13.45□□□□□ -0.26
LETMD1-221ENST00000550100 SLKQ9H2G2 1235 aaPredicted RBP13.45□□□□□ -0.26
LETMD1-221ENST00000550100 SH3GLB2Q9NR46 395 aa13.45□□□□□ -0.26
LETMD1-221ENST00000550100 NFASCO94856 1347 aa13.45□□□□□ -0.26
LETMD1-221ENST00000550100 PTPRSQ13332 1948 aa13.45□□□□□ -0.26
LETMD1-221ENST00000550100 KAT6AQ92794 2004 aa13.45□□□□□ -0.26
LETMD1-221ENST00000550100 UNC80Q8N2C7 3258 aa13.44□□□□□ -0.26
LETMD1-221ENST00000550100 CPLX1O14810 134 aa13.44□□□□□ -0.26
LETMD1-221ENST00000550100 ARHGEF15O94989 841 aa13.44□□□□□ -0.26
LETMD1-221ENST00000550100 DEXIO95424 95 aa13.44□□□□□ -0.26
LETMD1-221ENST00000550100 CXCL10P02778 98 aa13.44□□□□□ -0.26
LETMD1-221ENST00000550100 GNA11P29992 359 aa13.44□□□□□ -0.26
LETMD1-221ENST00000550100 CIITAP33076 1130 aa13.44□□□□□ -0.26
LETMD1-221ENST00000550100 ZNF76P36508 570 aa13.44□□□□□ -0.26
LETMD1-221ENST00000550100 THPOP40225 353 aa13.44□□□□□ -0.26
LETMD1-221ENST00000550100 NEK4P51957 841 aa13.44□□□□□ -0.26
LETMD1-221ENST00000550100 GRIN2CQ14957 1233 aa13.44□□□□□ -0.26
LETMD1-221ENST00000550100 OXER1Q8TDS5 423 aa13.44□□□□□ -0.26
LETMD1-221ENST00000550100 CDX2Q99626 313 aaPredicted RBP13.44□□□□□ -0.26
LETMD1-221ENST00000550100 FTOQ9C0B1 505 aaKnown RBP eCLIP13.44□□□□□ -0.26
LETMD1-221ENST00000550100 PCDHA4Q9UN74 947 aa13.44□□□□□ -0.26
LETMD1-221ENST00000550100 REV3LO60673 3130 aa13.43□□□□□ -0.26
LETMD1-221ENST00000550100 IGKV6D-21A0A0A0MT36 114 aa13.43□□□□□ -0.26
LETMD1-221ENST00000550100 ATP4AP20648 1035 aa13.43□□□□□ -0.26
LETMD1-221ENST00000550100 RFC2P35250 354 aa13.43□□□□□ -0.26
LETMD1-221ENST00000550100 PRR16Q569H4 304 aa13.43□□□□□ -0.26
LETMD1-221ENST00000550100 EARS2Q5JPH6 523 aaKnown RBP13.43□□□□□ -0.26
LETMD1-221ENST00000550100 ZNF697Q5TEC3 545 aa13.43□□□□□ -0.26
LETMD1-221ENST00000550100 ABHD15Q6UXT9 468 aa13.43□□□□□ -0.26
LETMD1-221ENST00000550100 TRIM22Q8IYM9 498 aa13.43□□□□□ -0.26
LETMD1-221ENST00000550100 CCDC12Q8WUD4 166 aaPredicted RBP13.43□□□□□ -0.26
LETMD1-221ENST00000550100 TRAPPC12Q8WVT3 735 aa13.43□□□□□ -0.26
LETMD1-221ENST00000550100 TIFAQ96CG3 184 aa13.43□□□□□ -0.26
LETMD1-221ENST00000550100 EMSYQ7Z589 1322 aa13.43□□□□□ -0.26
LETMD1-221ENST00000550100 ZBBXA8MT70 800 aa13.42□□□□□ -0.26
LETMD1-221ENST00000550100 IPO5O00410 1097 aaKnown RBP13.42□□□□□ -0.26
LETMD1-221ENST00000550100 JAK2O60674 1132 aa13.42□□□□□ -0.26
LETMD1-221ENST00000550100 CHRNA1P02708 482 aa13.42□□□□□ -0.26
LETMD1-221ENST00000550100 INSRRP14616 1297 aa13.42□□□□□ -0.26
LETMD1-221ENST00000550100 DEFB103AP81534 67 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms