RNA–Protein interactions for RNA: ENST00000549915.5

RAB5B-207, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5B, Length 494 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-207ENST00000549915 COL22A1Q8NFW1 1626 aaPredicted RBP4.27□□□□□ -1.73
RAB5B-207ENST00000549915 CPDO75976 1380 aa4.27□□□□□ -1.73
RAB5B-207ENST00000549915 TNRQ92752 1358 aa4.27□□□□□ -1.73
RAB5B-207ENST00000549915 NFAT5O94916 1531 aa4.26□□□□□ -1.73
RAB5B-207ENST00000549915 MROH7-TTC4A0A0A0MT08 1334 aa4.26□□□□□ -1.73
RAB5B-207ENST00000549915 ZMYM6O95789 1325 aa4.26□□□□□ -1.73
RAB5B-207ENST00000549915 STK36Q9NRP7 1315 aa4.26□□□□□ -1.73
RAB5B-207ENST00000549915 BCL9LQ86UU0 1499 aa4.26□□□□□ -1.73
RAB5B-207ENST00000549915 FAM95CA0A1B0GW59 222 aa4.26□□□□□ -1.73
RAB5B-207ENST00000549915 SHTN1A0MZ66 631 aa4.26□□□□□ -1.73
RAB5B-207ENST00000549915 SRRM3A6NNA2 597 aaPredicted RBP4.26□□□□□ -1.73
RAB5B-207ENST00000549915 METTL12A8MUP2 240 aa4.26□□□□□ -1.73
RAB5B-207ENST00000549915 TMCO5BA8MYB1 307 aa4.26□□□□□ -1.73
RAB5B-207ENST00000549915 E7EWF7 191 aa4.26□□□□□ -1.73
RAB5B-207ENST00000549915 EBAG9O00559 213 aa4.26□□□□□ -1.73
RAB5B-207ENST00000549915 CPLX1O14810 134 aa4.26□□□□□ -1.73
RAB5B-207ENST00000549915 ZEB2O60315 1214 aa4.26□□□□□ -1.73
RAB5B-207ENST00000549915 MFAP3LO75121 409 aa4.26□□□□□ -1.73
RAB5B-207ENST00000549915 ERLIN2O94905 339 aa4.26□□□□□ -1.73
RAB5B-207ENST00000549915 ADH5P11766 374 aa4.26□□□□□ -1.73
RAB5B-207ENST00000549915 MAOBP27338 520 aa4.26□□□□□ -1.73
RAB5B-207ENST00000549915 RXRBP28702 533 aa4.26□□□□□ -1.73
RAB5B-207ENST00000549915 PIP4K2AP48426 406 aaPredicted RBP4.26□□□□□ -1.73
RAB5B-207ENST00000549915 PLCD1P51178 756 aa4.26□□□□□ -1.73
RAB5B-207ENST00000549915 SOX4Q06945 474 aaPredicted RBP4.26□□□□□ -1.73
RAB5B-207ENST00000549915 SPAG1Q07617 926 aa4.26□□□□□ -1.73
RAB5B-207ENST00000549915 PLCB4Q15147 1175 aa4.26□□□□□ -1.73
RAB5B-207ENST00000549915 ZNF423Q2M1K9 1284 aa4.26□□□□□ -1.73
RAB5B-207ENST00000549915 SPRED3Q2MJR0 410 aa4.26□□□□□ -1.73
RAB5B-207ENST00000549915 FILIP1LQ4L180 1135 aa4.26□□□□□ -1.73
RAB5B-207ENST00000549915 TTLL5Q6EMB2 1281 aa4.26□□□□□ -1.73
RAB5B-207ENST00000549915 CCDC70Q6NSX1 233 aa4.26□□□□□ -1.73
RAB5B-207ENST00000549915 LRRC31Q6UY01 552 aa4.26□□□□□ -1.73
RAB5B-207ENST00000549915 ZNF662Q6ZS27 426 aa4.26□□□□□ -1.73
RAB5B-207ENST00000549915 TOGARAM2Q6ZUX3 1019 aa4.26□□□□□ -1.73
RAB5B-207ENST00000549915 STOX1Q6ZVD7 989 aa4.26□□□□□ -1.73
RAB5B-207ENST00000549915 UBE3BQ7Z3V4 1068 aa4.26□□□□□ -1.73
RAB5B-207ENST00000549915 PPFIBP1Q86W92 1011 aa4.26□□□□□ -1.73
RAB5B-207ENST00000549915 TMTC1Q8IUR5 882 aa4.26□□□□□ -1.73
RAB5B-207ENST00000549915 ANKRD20A12PQ8NF67 263 aa4.26□□□□□ -1.73
RAB5B-207ENST00000549915 DPF2Q92785 391 aa4.26□□□□□ -1.73
RAB5B-207ENST00000549915 SMARCC1Q92922 1105 aaPredicted RBP4.26□□□□□ -1.73
RAB5B-207ENST00000549915 PAGR1Q9BTK6 254 aa4.26□□□□□ -1.73
RAB5B-207ENST00000549915 NRSN2Q9GZP1 204 aa4.26□□□□□ -1.73
RAB5B-207ENST00000549915 CCDC8Q9H0W5 538 aaPredicted RBP4.26□□□□□ -1.73
RAB5B-207ENST00000549915 SIL1Q9H173 461 aa4.26□□□□□ -1.73
RAB5B-207ENST00000549915 FAM204AQ9H8W3 233 aa4.26□□□□□ -1.73
RAB5B-207ENST00000549915 ZCCHC17Q9NP64 241 aaKnown RBP4.26□□□□□ -1.73
RAB5B-207ENST00000549915 DDX21Q9NR30 783 aaKnown RBP eCLIP4.26□□□□□ -1.73
RAB5B-207ENST00000549915 INTS13Q9NVM9 706 aa4.26□□□□□ -1.73
RAB5B-207ENST00000549915 DBNLQ9UJU6 430 aaKnown RBP4.26□□□□□ -1.73
RAB5B-207ENST00000549915 PA2G4Q9UQ80 394 aaKnown RBP4.26□□□□□ -1.73
RAB5B-207ENST00000549915 CLIC4Q9Y696 253 aa4.26□□□□□ -1.73
RAB5B-207ENST00000549915 SIPA1L3O60292 1781 aaPredicted RBP4.26□□□□□ -1.73
RAB5B-207ENST00000549915 C4AP0C0L4 1744 aa4.26□□□□□ -1.73
RAB5B-207ENST00000549915 C4BP0C0L5 1744 aa4.26□□□□□ -1.73
RAB5B-207ENST00000549915 NID2Q14112 1375 aa4.26□□□□□ -1.73
RAB5B-207ENST00000549915 KIF1AQ12756 1690 aa4.26□□□□□ -1.73
RAB5B-207ENST00000549915 ANO9A1A5B4 782 aa4.25□□□□□ -1.73
RAB5B-207ENST00000549915 BTBD11A6QL63 1104 aa4.25□□□□□ -1.73
RAB5B-207ENST00000549915 GOLGA8BA8MQT2 603 aa4.25□□□□□ -1.73
RAB5B-207ENST00000549915 TMEM232C9JQI7 657 aa4.25□□□□□ -1.73
RAB5B-207ENST00000549915 GOLGA8KD6RF30 607 aa4.25□□□□□ -1.73
RAB5B-207ENST00000549915 PSMD14O00487 310 aa4.25□□□□□ -1.73
RAB5B-207ENST00000549915 BIN1O00499 593 aa4.25□□□□□ -1.73
RAB5B-207ENST00000549915 ATRNO75882 1429 aa4.25□□□□□ -1.73
RAB5B-207ENST00000549915 PRPF6O94906 941 aaKnown RBP4.25□□□□□ -1.73
RAB5B-207ENST00000549915 BMP15O95972 392 aa4.25□□□□□ -1.73
RAB5B-207ENST00000549915 CCDC172P0C7W6 258 aa4.25□□□□□ -1.73
RAB5B-207ENST00000549915 FDPSP14324 419 aaKnown RBP4.25□□□□□ -1.73
RAB5B-207ENST00000549915 ERCC3P19447 782 aa4.25□□□□□ -1.73
RAB5B-207ENST00000549915 EIF2S2P20042 333 aaKnown RBP4.25□□□□□ -1.73
RAB5B-207ENST00000549915 PBX1P40424 430 aa4.25□□□□□ -1.73
RAB5B-207ENST00000549915 ARHGAP25P42331 645 aa4.25□□□□□ -1.73
RAB5B-207ENST00000549915 SARSP49591 514 aaKnown RBP4.25□□□□□ -1.73
RAB5B-207ENST00000549915 USP14P54578 494 aa4.25□□□□□ -1.73
RAB5B-207ENST00000549915 VSNL1P62760 191 aa4.25□□□□□ -1.73
RAB5B-207ENST00000549915 AMPD2Q01433 879 aa4.25□□□□□ -1.73
RAB5B-207ENST00000549915 APBA1Q02410 837 aa4.25□□□□□ -1.73
RAB5B-207ENST00000549915 ITIH3Q06033 890 aa4.25□□□□□ -1.73
RAB5B-207ENST00000549915 DDR1Q08345 913 aa4.25□□□□□ -1.73
RAB5B-207ENST00000549915 PPFIA1Q13136 1202 aa4.25□□□□□ -1.73
RAB5B-207ENST00000549915 TRIM29Q14134 588 aa4.25□□□□□ -1.73
RAB5B-207ENST00000549915 MORC3Q14149 939 aa4.25□□□□□ -1.73
RAB5B-207ENST00000549915 NR1I3Q14994 352 aa4.25□□□□□ -1.73
RAB5B-207ENST00000549915 POSTNQ15063 836 aa4.25□□□□□ -1.73
RAB5B-207ENST00000549915 PTPAQ15257 358 aa4.25□□□□□ -1.73
RAB5B-207ENST00000549915 IMMTQ16891 758 aaKnown RBP4.25□□□□□ -1.73
RAB5B-207ENST00000549915 PLEKHO1Q53GL0 409 aaPredicted RBP4.25□□□□□ -1.73
RAB5B-207ENST00000549915 TTC39AQ5SRH9 613 aa4.25□□□□□ -1.73
RAB5B-207ENST00000549915 SHC4Q6S5L8 630 aa4.25□□□□□ -1.73
RAB5B-207ENST00000549915 MICALCLQ6ZW33 695 aa4.25□□□□□ -1.73
RAB5B-207ENST00000549915 B4GALNT4Q76KP1 1039 aa4.25□□□□□ -1.73
RAB5B-207ENST00000549915 YTHDF3Q7Z739 585 aaKnown RBP4.25□□□□□ -1.73
RAB5B-207ENST00000549915 RALYLQ86SE5 291 aaKnown RBP4.25□□□□□ -1.73
RAB5B-207ENST00000549915 METTL16Q86W50 562 aaKnown RBP4.25□□□□□ -1.73
RAB5B-207ENST00000549915 VPS37DQ86XT2 251 aa4.25□□□□□ -1.73
RAB5B-207ENST00000549915 TRIM42Q8IWZ5 723 aa4.25□□□□□ -1.73
RAB5B-207ENST00000549915 AMOTL1Q8IY63 956 aa4.25□□□□□ -1.73
RAB5B-207ENST00000549915 CNPY4Q8N129 248 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms