RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 FAM178BQ8IXR5 827 aa15.63■□□□□ 0.09
TROAP-211ENST00000549891 TMEM192Q8IY95 271 aa15.63■□□□□ 0.09
TROAP-211ENST00000549891 BANK1Q8NDB2 785 aa15.63■□□□□ 0.09
TROAP-211ENST00000549891 IGDCC4Q8TDY8 1250 aa15.63■□□□□ 0.09
TROAP-211ENST00000549891 LMBR1Q8WVP7 490 aa15.63■□□□□ 0.09
TROAP-211ENST00000549891 MTA3Q9BTC8 594 aa15.63■□□□□ 0.09
TROAP-211ENST00000549891 FAM50BQ9Y247 325 aa15.63■□□□□ 0.09
TROAP-211ENST00000549891 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.62■□□□□ 0.09
TROAP-211ENST00000549891 SGSM2O43147 1006 aa15.62■□□□□ 0.09
TROAP-211ENST00000549891 PDE4AP27815 886 aa15.62■□□□□ 0.09
TROAP-211ENST00000549891 SP4Q02446 784 aa15.62■□□□□ 0.09
TROAP-211ENST00000549891 USP17L6PQ6QN14 398 aa15.62■□□□□ 0.09
TROAP-211ENST00000549891 RPAINQ86UA6 219 aa15.62■□□□□ 0.09
TROAP-211ENST00000549891 TRIM50Q86XT4 487 aa15.62■□□□□ 0.09
TROAP-211ENST00000549891 ZNF654Q8IZM8 581 aa15.62■□□□□ 0.09
TROAP-211ENST00000549891 GJD3Q8N144 294 aa15.62■□□□□ 0.09
TROAP-211ENST00000549891 TMTC2Q8N394 836 aa15.62■□□□□ 0.09
TROAP-211ENST00000549891 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.62■□□□□ 0.09
TROAP-211ENST00000549891 GPRASP2Q96D09 838 aa15.62■□□□□ 0.09
TROAP-211ENST00000549891 IL17RAQ96F46 866 aa15.62■□□□□ 0.09
TROAP-211ENST00000549891 YTHDC1Q96MU7 727 aaKnown RBP15.62■□□□□ 0.09
TROAP-211ENST00000549891 RWDD3Q9Y3V2 267 aa15.62■□□□□ 0.09
TROAP-211ENST00000549891 MEIS2O14770 477 aa15.61■□□□□ 0.09
TROAP-211ENST00000549891 NCK2O43639 380 aa15.61■□□□□ 0.09
TROAP-211ENST00000549891 RPLP2P05387 115 aaKnown RBP15.61■□□□□ 0.09
TROAP-211ENST00000549891 SSTR3P32745 418 aaPredicted RBP15.61■□□□□ 0.09
TROAP-211ENST00000549891 TCF7P36402 384 aaPredicted RBP15.61■□□□□ 0.09
TROAP-211ENST00000549891 MB21D2Q8IYB1 491 aaPredicted RBP15.61■□□□□ 0.09
TROAP-211ENST00000549891 FIBCD1Q8N539 461 aa15.61■□□□□ 0.09
TROAP-211ENST00000549891 MAP4K1Q92918 833 aa15.61■□□□□ 0.09
TROAP-211ENST00000549891 NSUN3Q9H649 340 aaKnown RBP15.61■□□□□ 0.09
TROAP-211ENST00000549891 LY9Q9HBG7 655 aa15.61■□□□□ 0.09
TROAP-211ENST00000549891 ERAP1Q9NZ08 941 aa15.61■□□□□ 0.09
TROAP-211ENST00000549891 GRXCR2A6NFK2 248 aa15.6■□□□□ 0.09
TROAP-211ENST00000549891 CCDC69A6NI79 296 aa15.6■□□□□ 0.09
TROAP-211ENST00000549891 RB1P06400 928 aa15.6■□□□□ 0.09
TROAP-211ENST00000549891 CALM1P0DP23 149 aa15.6■□□□□ 0.09
TROAP-211ENST00000549891 CALM2P0DP24 149 aa15.6■□□□□ 0.09
TROAP-211ENST00000549891 CALM3P0DP25 149 aa15.6■□□□□ 0.09
TROAP-211ENST00000549891 ALADP13716 330 aa15.6■□□□□ 0.09
TROAP-211ENST00000549891 ANTXR2P58335 489 aa15.6■□□□□ 0.09
TROAP-211ENST00000549891 PPFIA1Q13136 1202 aa15.6■□□□□ 0.09
TROAP-211ENST00000549891 NFXL1Q6ZNB6 911 aa15.6■□□□□ 0.09
TROAP-211ENST00000549891 NEK9Q8TD19 979 aa15.6■□□□□ 0.09
TROAP-211ENST00000549891 SEPT1Q8WYJ6 367 aa15.6■□□□□ 0.09
TROAP-211ENST00000549891 KHSRPQ92945 711 aaKnown RBP eCLIP15.6■□□□□ 0.092e-6■■□□□ 11.4
TROAP-211ENST00000549891 PABPC5Q96DU9 382 aaKnown RBP15.6■□□□□ 0.09
TROAP-211ENST00000549891 PSTPIP2Q9H939 334 aa15.6■□□□□ 0.09
TROAP-211ENST00000549891 CD320Q9NPF0 282 aa15.6■□□□□ 0.09
TROAP-211ENST00000549891 TAF6LQ9Y6J9 622 aa15.6■□□□□ 0.09
TROAP-211ENST00000549891 ATG2AQ2TAZ0 1938 aa15.6■□□□□ 0.09
TROAP-211ENST00000549891 TTC3P53804 2025 aa15.6■□□□□ 0.09
TROAP-211ENST00000549891 LOXHD1Q8IVV2 1947 aa15.59■□□□□ 0.09
TROAP-211ENST00000549891 C5orf67F2Z3F1 127 aa15.59■□□□□ 0.09
TROAP-211ENST00000549891 MAFGO15525 162 aa15.59■□□□□ 0.09
TROAP-211ENST00000549891 CHRNA1P02708 482 aa15.59■□□□□ 0.09
TROAP-211ENST00000549891 IL9P15248 144 aa15.59■□□□□ 0.09
TROAP-211ENST00000549891 MCM5P33992 734 aa15.59■□□□□ 0.09
TROAP-211ENST00000549891 CTNNB1P35222 781 aa15.59■□□□□ 0.09
TROAP-211ENST00000549891 MTMR1Q13613 665 aa15.59■□□□□ 0.09
TROAP-211ENST00000549891 TCEAL5Q5H9L2 206 aa15.59■□□□□ 0.09
TROAP-211ENST00000549891 EP400NLQ6ZTU2 488 aa15.59■□□□□ 0.09
TROAP-211ENST00000549891 GLG1Q92896 1179 aa15.59■□□□□ 0.09
TROAP-211ENST00000549891 TNPO1Q92973 898 aaKnown RBP15.59■□□□□ 0.09
TROAP-211ENST00000549891 TMEM87BQ96K49 555 aa15.59■□□□□ 0.09
TROAP-211ENST00000549891 C11orf84Q9BUA3 381 aaPredicted RBP15.59■□□□□ 0.09
TROAP-211ENST00000549891 MYL10Q9BUA6 226 aa15.59■□□□□ 0.09
TROAP-211ENST00000549891 OSBPL7Q9BZF2 842 aa15.59■□□□□ 0.09
TROAP-211ENST00000549891 LMAN2LQ9H0V9 348 aa15.59■□□□□ 0.09
TROAP-211ENST00000549891 SMARCAD1Q9H4L7 1026 aa15.59■□□□□ 0.09
TROAP-211ENST00000549891 TUBE1Q9UJT0 475 aa15.59■□□□□ 0.09
TROAP-211ENST00000549891 RBM8AQ9Y5S9 174 aaKnown RBP15.59■□□□□ 0.09
TROAP-211ENST00000549891 SPDYE3A6NKU9 549 aa15.58■□□□□ 0.08
TROAP-211ENST00000549891 PRR33A8MZF0 331 aa15.58■□□□□ 0.08
TROAP-211ENST00000549891 PRC1O43663 620 aa15.58■□□□□ 0.08
TROAP-211ENST00000549891 GHRP10912 638 aa15.58■□□□□ 0.08
TROAP-211ENST00000549891 KCNA2P16389 499 aa15.58■□□□□ 0.08
TROAP-211ENST00000549891 GRIK4Q16099 956 aa15.58■□□□□ 0.08
TROAP-211ENST00000549891 EHMT1Q9H9B1 1298 aa15.58■□□□□ 0.08
TROAP-211ENST00000549891 C11orf16Q9NQ32 467 aa15.58■□□□□ 0.08
TROAP-211ENST00000549891 PRKAG3Q9UGI9 489 aa15.58■□□□□ 0.08
TROAP-211ENST00000549891 ADGRA3Q8IWK6 1321 aa15.58■□□□□ 0.08
TROAP-211ENST00000549891 MYO7AQ13402 2215 aa15.58■□□□□ 0.08
TROAP-211ENST00000549891 FAM86C2PA6NEL3 165 aa15.57■□□□□ 0.08
TROAP-211ENST00000549891 RRN3P2A6NIE6 340 aa15.57■□□□□ 0.08
TROAP-211ENST00000549891 H3BQ06 376 aaPredicted RBP15.57■□□□□ 0.08
TROAP-211ENST00000549891 ATP9AO75110 1047 aa15.57■□□□□ 0.08
TROAP-211ENST00000549891 MARK3P27448 753 aa15.57■□□□□ 0.08
TROAP-211ENST00000549891 HOXD11P31277 338 aaPredicted RBP15.57■□□□□ 0.08
TROAP-211ENST00000549891 BMPR1AP36894 532 aa15.57■□□□□ 0.08
TROAP-211ENST00000549891 LPIN1Q14693 890 aa15.57■□□□□ 0.08
TROAP-211ENST00000549891 COL19A1Q14993 1142 aa15.57■□□□□ 0.08
TROAP-211ENST00000549891 RUFY4Q6ZNE9 571 aa15.57■□□□□ 0.08
TROAP-211ENST00000549891 TSHZ1Q6ZSZ6 1077 aa15.57■□□□□ 0.08
TROAP-211ENST00000549891 SRBD1Q8N5C6 995 aaKnown RBP15.57■□□□□ 0.08
TROAP-211ENST00000549891 CLDND1Q9NY35 253 aa15.57■□□□□ 0.08
TROAP-211ENST00000549891 TELO2Q9Y4R8 837 aa15.57■□□□□ 0.08
TROAP-211ENST00000549891 GSTTP1A0A1W2PQM5 241 aa15.56■□□□□ 0.08
TROAP-211ENST00000549891 MBLAC1A4D2B0 266 aaPredicted RBP15.56■□□□□ 0.08
TROAP-211ENST00000549891 RBAK-RBAKDNI3L0D1 243 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms