RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 PPP2R5DQ14738 602 aa5.79□□□□□ -1.48
SNRPF-202ENST00000549580 ICAM4Q14773 271 aa5.79□□□□□ -1.48
SNRPF-202ENST00000549580 SLC35F1Q5T1Q4 408 aa5.79□□□□□ -1.48
SNRPF-202ENST00000549580 MCTP2Q6DN12 878 aa5.79□□□□□ -1.48
SNRPF-202ENST00000549580 ZNF575Q86XF7 245 aa5.79□□□□□ -1.48
SNRPF-202ENST00000549580 AFAP1L2Q8N4X5 818 aa5.79□□□□□ -1.48
SNRPF-202ENST00000549580 NLGN2Q8NFZ4 835 aa5.79□□□□□ -1.48
SNRPF-202ENST00000549580 KCTD13Q8WZ19 329 aa5.79□□□□□ -1.48
SNRPF-202ENST00000549580 NOL6Q9H6R4 1146 aaKnown RBP5.79□□□□□ -1.48
SNRPF-202ENST00000549580 SLC52A2Q9HAB3 445 aa5.79□□□□□ -1.48
SNRPF-202ENST00000549580 SF3B6Q9Y3B4 125 aaKnown RBP5.79□□□□□ -1.48
SNRPF-202ENST00000549580 SIT1Q9Y3P8 196 aa5.79□□□□□ -1.48
SNRPF-202ENST00000549580 HS3ST3A1Q9Y663 406 aa5.79□□□□□ -1.48
SNRPF-202ENST00000549580 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.78□□□□□ -1.48
SNRPF-202ENST00000549580 NPTXRO95502 500 aa5.78□□□□□ -1.48
SNRPF-202ENST00000549580 CPP00450 1065 aa5.78□□□□□ -1.48
SNRPF-202ENST00000549580 C8BP07358 591 aa5.78□□□□□ -1.48
SNRPF-202ENST00000549580 CORO7P57737 925 aa5.78□□□□□ -1.48
SNRPF-202ENST00000549580 MAMDC2Q7Z304 686 aaPredicted RBP5.78□□□□□ -1.48
SNRPF-202ENST00000549580 BRAPQ7Z569 592 aa5.78□□□□□ -1.48
SNRPF-202ENST00000549580 DDX42Q86XP3 938 aaKnown RBP eCLIP5.78□□□□□ -1.48
SNRPF-202ENST00000549580 LINC00482Q8N8I6 264 aa5.78□□□□□ -1.48
SNRPF-202ENST00000549580 TMEM145Q8NBT3 493 aa5.78□□□□□ -1.48
SNRPF-202ENST00000549580 PTPRN2Q92932 1015 aa5.78□□□□□ -1.48
SNRPF-202ENST00000549580 MCMBPQ9BTE3 642 aa5.78□□□□□ -1.48
SNRPF-202ENST00000549580 HOMER2Q9NSB8 354 aa5.78□□□□□ -1.48
SNRPF-202ENST00000549580 C11orf21Q9P2W6 132 aa5.78□□□□□ -1.48
SNRPF-202ENST00000549580 NDOR1Q9UHB4 597 aa5.78□□□□□ -1.48
SNRPF-202ENST00000549580 BLACEA4D250 179 aa5.77□□□□□ -1.49
SNRPF-202ENST00000549580 VAMP4O75379 141 aa5.77□□□□□ -1.49
SNRPF-202ENST00000549580 TBC1D8O95759 1140 aa5.77□□□□□ -1.49
SNRPF-202ENST00000549580 NOP2P46087 812 aaKnown RBP5.77□□□□□ -1.49
SNRPF-202ENST00000549580 AMPD2Q01433 879 aa5.77□□□□□ -1.49
SNRPF-202ENST00000549580 DENND5AQ6IQ26 1287 aa5.77□□□□□ -1.49
SNRPF-202ENST00000549580 GLB1LQ6UWU2 654 aa5.77□□□□□ -1.49
SNRPF-202ENST00000549580 FGD2Q7Z6J4 655 aa5.77□□□□□ -1.49
SNRPF-202ENST00000549580 PPM1KQ8N3J5 372 aa5.77□□□□□ -1.49
SNRPF-202ENST00000549580 FAM26EQ8N5C1 309 aa5.77□□□□□ -1.49
SNRPF-202ENST00000549580 UBR7Q8N806 425 aa5.77□□□□□ -1.49
SNRPF-202ENST00000549580 KREMEN2Q8NCW0 462 aa5.77□□□□□ -1.49
SNRPF-202ENST00000549580 CPA5Q8WXQ8 436 aa5.77□□□□□ -1.49
SNRPF-202ENST00000549580 SCLYQ96I15 445 aa5.77□□□□□ -1.49
SNRPF-202ENST00000549580 ZDHHC15Q96MV8 337 aa5.77□□□□□ -1.49
SNRPF-202ENST00000549580 KLC2Q9H0B6 622 aa5.77□□□□□ -1.49
SNRPF-202ENST00000549580 CD248Q9HCU0 757 aa5.77□□□□□ -1.49
SNRPF-202ENST00000549580 TNPO3Q9Y5L0 923 aaKnown RBP5.77□□□□□ -1.49
SNRPF-202ENST00000549580 PARNO95453 639 aaKnown RBP5.76□□□□□ -1.49
SNRPF-202ENST00000549580 EYA4O95677 639 aa5.76□□□□□ -1.49
SNRPF-202ENST00000549580 ASLP04424 464 aa5.76□□□□□ -1.49
SNRPF-202ENST00000549580 SNRPB2P08579 225 aaKnown RBP5.76□□□□□ -1.49
SNRPF-202ENST00000549580 EVA1CP58658 441 aa5.76□□□□□ -1.49
SNRPF-202ENST00000549580 TESK1Q15569 626 aa5.76□□□□□ -1.49
SNRPF-202ENST00000549580 SMN1Q16637 294 aaKnown RBP5.76□□□□□ -1.49
SNRPF-202ENST00000549580 CT47A1Q5JQC4 288 aaPredicted RBP5.76□□□□□ -1.49
SNRPF-202ENST00000549580 STYK1Q6J9G0 422 aa5.76□□□□□ -1.49
SNRPF-202ENST00000549580 CNNM4Q6P4Q7 775 aa5.76□□□□□ -1.49
SNRPF-202ENST00000549580 DDX46Q7L014 1031 aaKnown RBP5.76□□□□□ -1.49
SNRPF-202ENST00000549580 PALM2Q8IXS6 379 aa5.76□□□□□ -1.49
SNRPF-202ENST00000549580 LGI4Q8N135 537 aa5.76□□□□□ -1.49
SNRPF-202ENST00000549580 AHI1Q8N157 1196 aa5.76□□□□□ -1.49
SNRPF-202ENST00000549580 LZTR1Q8N653 840 aa5.76□□□□□ -1.49
SNRPF-202ENST00000549580 CDK5RAP1Q96SZ6 601 aaKnown RBP5.76□□□□□ -1.49
SNRPF-202ENST00000549580 C11orf84Q9BUA3 381 aaPredicted RBP5.76□□□□□ -1.49
SNRPF-202ENST00000549580 MTFR1LQ9H019 292 aa5.76□□□□□ -1.49
SNRPF-202ENST00000549580 PPP4R1LQ9P1A2 415 aa5.76□□□□□ -1.49
SNRPF-202ENST00000549580 GULP1Q9UBP9 304 aa5.76□□□□□ -1.49
SNRPF-202ENST00000549580 MCM8Q9UJA3 840 aa5.76□□□□□ -1.49
SNRPF-202ENST00000549580 TCRBV16S1A1N1A0A5B0 115 aa5.75□□□□□ -1.49
SNRPF-202ENST00000549580 MROH6A6NGR9 719 aa5.75□□□□□ -1.49
SNRPF-202ENST00000549580 ALG1L2C9J202 215 aa5.75□□□□□ -1.49
SNRPF-202ENST00000549580 S100BP04271 92 aaPredicted RBP5.75□□□□□ -1.49
SNRPF-202ENST00000549580 THBS2P35442 1172 aa5.75□□□□□ -1.49
SNRPF-202ENST00000549580 KCNJ6P48051 423 aa5.75□□□□□ -1.49
SNRPF-202ENST00000549580 EXOSC10Q01780 885 aaKnown RBP5.75□□□□□ -1.49
SNRPF-202ENST00000549580 DHCR24Q15392 516 aa5.75□□□□□ -1.49
SNRPF-202ENST00000549580 PRSS53Q2L4Q9 553 aa5.75□□□□□ -1.49
SNRPF-202ENST00000549580 BRDTQ58F21 947 aaPredicted RBP5.75□□□□□ -1.49
SNRPF-202ENST00000549580 ZNF585AQ6P3V2 769 aa5.75□□□□□ -1.49
SNRPF-202ENST00000549580 STRA8Q7Z7C7 330 aa5.75□□□□□ -1.49
SNRPF-202ENST00000549580 CPNE8Q86YQ8 564 aa5.75□□□□□ -1.49
SNRPF-202ENST00000549580 NPLOC4Q8TAT6 608 aa5.75□□□□□ -1.49
SNRPF-202ENST00000549580 DCAF4Q8WV16 495 aa5.75□□□□□ -1.49
SNRPF-202ENST00000549580 COPS5Q92905 334 aa5.75□□□□□ -1.49
SNRPF-202ENST00000549580 MTA3Q9BTC8 594 aa5.75□□□□□ -1.49
SNRPF-202ENST00000549580 ASXL2Q76L83 1435 aa5.74□□□□□ -1.49
SNRPF-202ENST00000549580 DDX3XO00571 662 aaKnown RBP eCLIP5.74□□□□□ -1.49
SNRPF-202ENST00000549580 AURKAO14965 403 aa5.74□□□□□ -1.49
SNRPF-202ENST00000549580 RPL13P26373 211 aaKnown RBP5.74□□□□□ -1.49
SNRPF-202ENST00000549580 IGFALSP35858 605 aa5.74□□□□□ -1.49
SNRPF-202ENST00000549580 ECI1P42126 302 aa5.74□□□□□ -1.49
SNRPF-202ENST00000549580 POU4F1Q01851 419 aa5.74□□□□□ -1.49
SNRPF-202ENST00000549580 KIAA2012Q0VF49 1180 aa5.74□□□□□ -1.49
SNRPF-202ENST00000549580 SCRN1Q12765 414 aa5.74□□□□□ -1.49
SNRPF-202ENST00000549580 ZNF460Q14592 562 aa5.74□□□□□ -1.49
SNRPF-202ENST00000549580 PCBP1Q15365 356 aaKnown RBP eCLIP5.74□□□□□ -1.49
SNRPF-202ENST00000549580 ACBD5Q5T8D3 534 aaPredicted RBP5.74□□□□□ -1.49
SNRPF-202ENST00000549580 TXNDC5Q8NBS9 432 aaKnown RBP5.74□□□□□ -1.49
SNRPF-202ENST00000549580 FRS2Q8WU20 508 aa5.74□□□□□ -1.49
SNRPF-202ENST00000549580 LEO1Q8WVC0 666 aaPredicted RBP5.74□□□□□ -1.49
SNRPF-202ENST00000549580 PEX11GQ96HA9 241 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms