RNA–Protein interactions for RNA: ENST00000549328.1

CHMP1A-207, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-207ENST00000549328 GAS2L1Q99501 681 aaPredicted RBP21.31■■□□□ 1
CHMP1A-207ENST00000549328 TM6SF1Q9BZW5 370 aa21.31■■□□□ 1
CHMP1A-207ENST00000549328 ZMYND12Q9H0C1 365 aa21.31■■□□□ 1
CHMP1A-207ENST00000549328 SETD4Q9NVD3 440 aa21.31■■□□□ 1
CHMP1A-207ENST00000549328 A0A0C4DFX4 3053 aa21.31■■□□□ 1
CHMP1A-207ENST00000549328 EMSYQ7Z589 1322 aa21.3■■□□□ 1
CHMP1A-207ENST00000549328 NRCAMQ92823 1304 aa21.3■■□□□ 1
CHMP1A-207ENST00000549328 GBF1Q92538 1859 aa21.3■■□□□ 1
CHMP1A-207ENST00000549328 ABHD14A-ACY1A0A1B0GW23 586 aa21.3■■□□□ 1
CHMP1A-207ENST00000549328 RSPH10B2B2RC85 870 aa21.3■■□□□ 1
CHMP1A-207ENST00000549328 EFCAB14O75071 495 aa21.3■■□□□ 1
CHMP1A-207ENST00000549328 RSPH10BP0C881 870 aa21.3■■□□□ 1
CHMP1A-207ENST00000549328 THPOP40225 353 aa21.3■■□□□ 1
CHMP1A-207ENST00000549328 KCNJ6P48051 423 aa21.3■■□□□ 1
CHMP1A-207ENST00000549328 NTRK3Q16288 839 aa21.3■■□□□ 1
CHMP1A-207ENST00000549328 PKN1Q16512 942 aa21.3■■□□□ 1
CHMP1A-207ENST00000549328 PRDM12Q9H4Q4 367 aa21.3■■□□□ 1
CHMP1A-207ENST00000549328 CYP46A1Q9Y6A2 500 aa21.3■■□□□ 1
CHMP1A-207ENST00000549328 CHD9Q3L8U1 2897 aa21.3■■□□□ 1
CHMP1A-207ENST00000549328 NFASCO94856 1347 aa21.29■■□□□ 1
CHMP1A-207ENST00000549328 KIF28PB7ZC32 967 aa21.29■■□□□ 1
CHMP1A-207ENST00000549328 MEIS1O00470 390 aa21.29■■□□□ 1
CHMP1A-207ENST00000549328 MYOGP15173 224 aa21.29■■□□□ 1
CHMP1A-207ENST00000549328 IFNAR1P17181 557 aa21.29■■□□□ 1
CHMP1A-207ENST00000549328 PDIA3P30101 505 aaKnown RBP21.29■■□□□ 1
CHMP1A-207ENST00000549328 AKAP17AQ02040 695 aaKnown RBP21.29■■□□□ 1
CHMP1A-207ENST00000549328 MBTPS1Q14703 1052 aa21.29■■□□□ 1
CHMP1A-207ENST00000549328 PPP2R2DQ66LE6 453 aa21.29■■□□□ 1
CHMP1A-207ENST00000549328 NIPA1Q7RTP0 329 aa21.29■■□□□ 1
CHMP1A-207ENST00000549328 HERC6Q8IVU3 1022 aa21.29■■□□□ 1
CHMP1A-207ENST00000549328 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.29■■□□□ 1
CHMP1A-207ENST00000549328 CYP2W1Q8TAV3 490 aa21.29■■□□□ 1
CHMP1A-207ENST00000549328 PGBD1Q96JS3 809 aa21.29■■□□□ 1
CHMP1A-207ENST00000549328 RNF26Q9BY78 433 aaPredicted RBP21.29■■□□□ 1
CHMP1A-207ENST00000549328 SMARCAD1Q9H4L7 1026 aa21.29■■□□□ 1
CHMP1A-207ENST00000549328 C6orf50Q9HD87 102 aa21.29■■□□□ 1
CHMP1A-207ENST00000549328 JPH1Q9HDC5 661 aaPredicted RBP21.29■■□□□ 1
CHMP1A-207ENST00000549328 TMEM260Q9NX78 707 aa21.29■■□□□ 1
CHMP1A-207ENST00000549328 ERAP1Q9NZ08 941 aa21.29■■□□□ 1
CHMP1A-207ENST00000549328 GNA11P29992 359 aa21.28■■□□□ 1
CHMP1A-207ENST00000549328 WDR5P61964 334 aaKnown RBP21.28■■□□□ 1
CHMP1A-207ENST00000549328 IKBKEQ14164 716 aa21.28■■□□□ 1
CHMP1A-207ENST00000549328 LMBR1Q8WVP7 490 aa21.28■■□□□ 1
CHMP1A-207ENST00000549328 SDF4Q9BRK5 362 aa21.28■■□□□ 1
CHMP1A-207ENST00000549328 PKD2L1Q9P0L9 805 aa21.28■■□□□ 1
CHMP1A-207ENST00000549328 SLC9A2Q9UBY0 812 aa21.28■■□□□ 1
CHMP1A-207ENST00000549328 LGR5O75473 907 aa21.27■■□□□ 1
CHMP1A-207ENST00000549328 CYP3A4P08684 503 aa21.27■■□□□ 1
CHMP1A-207ENST00000549328 ARP10275 920 aa21.27■■□□□ 1
CHMP1A-207ENST00000549328 ARHGAP4P98171 946 aa21.27■■□□□ 1
CHMP1A-207ENST00000549328 TOB2Q14106 344 aaPredicted RBP21.27■■□□□ 1
CHMP1A-207ENST00000549328 CRYGNQ8WXF5 182 aa21.27■■□□□ 1
CHMP1A-207ENST00000549328 GLG1Q92896 1179 aa21.27■■□□□ 1
CHMP1A-207ENST00000549328 PHKBQ93100 1093 aa21.27■■□□□ 1
CHMP1A-207ENST00000549328 EYSQ5T1H1 3165 aa21.26■□□□□ 0.99
CHMP1A-207ENST00000549328 KAT6AQ92794 2004 aa21.26■□□□□ 0.99
CHMP1A-207ENST00000549328 CA3P07451 260 aa21.26■□□□□ 0.99
CHMP1A-207ENST00000549328 ZNF76P36508 570 aa21.26■□□□□ 0.99
CHMP1A-207ENST00000549328 JAKMIP3Q5VZ66 844 aa21.26■□□□□ 0.99
CHMP1A-207ENST00000549328 RPAINQ86UA6 219 aa21.26■□□□□ 0.99
CHMP1A-207ENST00000549328 REXO1Q8N1G1 1221 aaKnown RBP21.26■□□□□ 0.99
CHMP1A-207ENST00000549328 TNPO1Q92973 898 aaKnown RBP21.26■□□□□ 0.99
CHMP1A-207ENST00000549328 ZNF274Q96GC6 653 aaPredicted RBP21.26■□□□□ 0.99
CHMP1A-207ENST00000549328 AGO4Q9HCK5 861 aaKnown RBP21.26■□□□□ 0.99
CHMP1A-207ENST00000549328 CCT2P78371 535 aaKnown RBP21.25■□□□□ 0.99
CHMP1A-207ENST00000549328 PLEKHG4Q58EX7 1191 aa21.25■□□□□ 0.99
CHMP1A-207ENST00000549328 FAM26DQ5JW98 314 aa21.25■□□□□ 0.99
CHMP1A-207ENST00000549328 TAF2Q6P1X5 1199 aa21.25■□□□□ 0.99
CHMP1A-207ENST00000549328 CCDC148Q8NFR7 591 aa21.25■□□□□ 0.99
CHMP1A-207ENST00000549328 DBF4BQ8NFT6 615 aa21.25■□□□□ 0.99
CHMP1A-207ENST00000549328 BICD2Q8TD16 824 aa21.25■□□□□ 0.99
CHMP1A-207ENST00000549328 SLC26A6Q9BXS9 759 aa21.25■□□□□ 0.99
CHMP1A-207ENST00000549328 AZI2Q9H6S1 392 aa21.25■□□□□ 0.99
CHMP1A-207ENST00000549328 UNC80Q8N2C7 3258 aa21.25■□□□□ 0.99
CHMP1A-207ENST00000549328 DLL1O00548 723 aa21.24■□□□□ 0.99
CHMP1A-207ENST00000549328 TLL1O43897 1013 aa21.24■□□□□ 0.99
CHMP1A-207ENST00000549328 ATG7O95352 703 aa21.24■□□□□ 0.99
CHMP1A-207ENST00000549328 ACTR2P61160 394 aa21.24■□□□□ 0.99
CHMP1A-207ENST00000549328 PPFIA1Q13136 1202 aa21.24■□□□□ 0.99
CHMP1A-207ENST00000549328 ITGB3BPQ13352 177 aaPredicted RBP21.24■□□□□ 0.99
CHMP1A-207ENST00000549328 ADGRE1Q14246 886 aa21.24■□□□□ 0.99
CHMP1A-207ENST00000549328 TCTN1Q2MV58 587 aa21.24■□□□□ 0.99
CHMP1A-207ENST00000549328 PLPPR4Q7Z2D5 763 aa21.24■□□□□ 0.99
CHMP1A-207ENST00000549328 PCYT2Q99447 389 aa21.24■□□□□ 0.99
CHMP1A-207ENST00000549328 NCOA5Q9HCD5 579 aaKnown RBP21.24■□□□□ 0.99
CHMP1A-207ENST00000549328 SH3GLB2Q9NR46 395 aa21.24■□□□□ 0.99
CHMP1A-207ENST00000549328 CHD7Q9P2D1 2997 aa21.23■□□□□ 0.99
CHMP1A-207ENST00000549328 MBLAC1A4D2B0 266 aaPredicted RBP21.23■□□□□ 0.99
CHMP1A-207ENST00000549328 RRN3P2A6NIE6 340 aa21.23■□□□□ 0.99
CHMP1A-207ENST00000549328 FAM86B1E9PN63 330 aa21.23■□□□□ 0.99
CHMP1A-207ENST00000549328 FAM86B2P0C5J1 330 aa21.23■□□□□ 0.99
CHMP1A-207ENST00000549328 MARK3P27448 753 aa21.23■□□□□ 0.99
CHMP1A-207ENST00000549328 DEFB103AP81534 67 aa21.23■□□□□ 0.99
CHMP1A-207ENST00000549328 GRIK4Q16099 956 aa21.23■□□□□ 0.99
CHMP1A-207ENST00000549328 PLA2G4DQ86XP0 818 aa21.23■□□□□ 0.99
CHMP1A-207ENST00000549328 TRIM22Q8IYM9 498 aa21.23■□□□□ 0.99
CHMP1A-207ENST00000549328 ZBED2Q9BTP6 218 aa21.23■□□□□ 0.99
CHMP1A-207ENST00000549328 UPF3BQ9BZI7 483 aaKnown RBP21.23■□□□□ 0.99
CHMP1A-207ENST00000549328 PRUNE2Q8WUY3 3088 aa21.23■□□□□ 0.99
CHMP1A-207ENST00000549328 IGLV3-22A0A075B6J6 115 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms