RNA–Protein interactions for RNA: ENST00000549151.5

RAPGEF3-219, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 3,265 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-219ENST00000549151 PNMA6FA0A0J9YX94 578 aa13.12□□□□□ -0.31
RAPGEF3-219ENST00000549151 LCA5LO95447 670 aa13.12□□□□□ -0.31
RAPGEF3-219ENST00000549151 PRLRP16471 622 aa13.12□□□□□ -0.31
RAPGEF3-219ENST00000549151 CORO7P57737 925 aa13.12□□□□□ -0.31
RAPGEF3-219ENST00000549151 CYP4A11Q02928 519 aa13.12□□□□□ -0.31
RAPGEF3-219ENST00000549151 KCNH2Q12809 1159 aa13.12□□□□□ -0.31
RAPGEF3-219ENST00000549151 IKQ13123 557 aaPredicted RBP13.12□□□□□ -0.31
RAPGEF3-219ENST00000549151 SHROOM1Q2M3G4 852 aaPredicted RBP13.12□□□□□ -0.31
RAPGEF3-219ENST00000549151 TMEM119Q4V9L6 283 aa13.12□□□□□ -0.31
RAPGEF3-219ENST00000549151 PRR5LQ6MZQ0 368 aa13.12□□□□□ -0.31
RAPGEF3-219ENST00000549151 EMBQ6PCB8 327 aa13.12□□□□□ -0.31
RAPGEF3-219ENST00000549151 SSU72P8A0A1W2PR75 194 aa13.11□□□□□ -0.31
RAPGEF3-219ENST00000549151 GOLGA8KD6RF30 607 aa13.11□□□□□ -0.31
RAPGEF3-219ENST00000549151 CEP104O60308 925 aa13.11□□□□□ -0.31
RAPGEF3-219ENST00000549151 HPDP32754 393 aaPredicted RBP13.11□□□□□ -0.31
RAPGEF3-219ENST00000549151 CASP5P51878 434 aa13.11□□□□□ -0.31
RAPGEF3-219ENST00000549151 CACNB3P54284 484 aa13.11□□□□□ -0.31
RAPGEF3-219ENST00000549151 ZNF543Q08ER8 600 aa13.11□□□□□ -0.31
RAPGEF3-219ENST00000549151 PSMD2Q13200 908 aa13.11□□□□□ -0.31
RAPGEF3-219ENST00000549151 BARGINQ6ZT62 677 aa13.11□□□□□ -0.31
RAPGEF3-219ENST00000549151 SCFD1Q8WVM8 642 aa13.11□□□□□ -0.31
RAPGEF3-219ENST00000549151 AP1M1Q9BXS5 423 aa13.11□□□□□ -0.31
RAPGEF3-219ENST00000549151 BCAS3Q9H6U6 928 aa13.11□□□□□ -0.31
RAPGEF3-219ENST00000549151 NAV1Q8NEY1 1877 aa13.11□□□□□ -0.31
RAPGEF3-219ENST00000549151 NDUFAB1O14561 156 aa13.11□□□□□ -0.31
RAPGEF3-219ENST00000549151 PJA2O43164 708 aa13.11□□□□□ -0.31
RAPGEF3-219ENST00000549151 TTLL1O95922 423 aa13.11□□□□□ -0.31
RAPGEF3-219ENST00000549151 TCP10Q12799 353 aa13.11□□□□□ -0.31
RAPGEF3-219ENST00000549151 COBLL1Q53SF7 1204 aa13.11□□□□□ -0.31
RAPGEF3-219ENST00000549151 CETN3O15182 167 aa13.1□□□□□ -0.31
RAPGEF3-219ENST00000549151 GUCY1A3Q02108 690 aa13.1□□□□□ -0.31
RAPGEF3-219ENST00000549151 SLC18A3Q16572 532 aa13.1□□□□□ -0.31
RAPGEF3-219ENST00000549151 USH1GQ495M9 461 aa13.1□□□□□ -0.31
RAPGEF3-219ENST00000549151 PRR16Q569H4 304 aa13.1□□□□□ -0.31
RAPGEF3-219ENST00000549151 SLC30A10Q6XR72 485 aa13.1□□□□□ -0.31
RAPGEF3-219ENST00000549151 DDX42Q86XP3 938 aaKnown RBP eCLIP13.1□□□□□ -0.31
RAPGEF3-219ENST00000549151 USP40Q9NVE5 1235 aa13.1□□□□□ -0.31
RAPGEF3-219ENST00000549151 SERPINB13Q9UIV8 391 aa13.1□□□□□ -0.31
RAPGEF3-219ENST00000549151 MED24O75448 989 aa13.1□□□□□ -0.31
RAPGEF3-219ENST00000549151 PSMC6P62333 389 aa13.1□□□□□ -0.31
RAPGEF3-219ENST00000549151 DOK7Q18PE1 504 aa13.1□□□□□ -0.31
RAPGEF3-219ENST00000549151 ZCWPW2Q504Y3 356 aa13.1□□□□□ -0.31
RAPGEF3-219ENST00000549151 SAMD1Q6SPF0 538 aaPredicted RBP13.1□□□□□ -0.31
RAPGEF3-219ENST00000549151 SLF2Q8IX21 1173 aa13.1□□□□□ -0.31
RAPGEF3-219ENST00000549151 PROM2Q8N271 834 aa13.1□□□□□ -0.31
RAPGEF3-219ENST00000549151 RNF10Q8N5U6 811 aaKnown RBP13.1□□□□□ -0.31
RAPGEF3-219ENST00000549151 CASKIN2Q8WXE0 1202 aa13.1□□□□□ -0.31
RAPGEF3-219ENST00000549151 BCCIPQ9P287 314 aaKnown RBP eCLIP13.1□□□□□ -0.31
RAPGEF3-219ENST00000549151 PCDHA1Q9Y5I3 950 aa13.1□□□□□ -0.31
RAPGEF3-219ENST00000549151 FAM169AQ9Y6X4 670 aa13.1□□□□□ -0.31
RAPGEF3-219ENST00000549151 SFI1A8K8P3 1242 aa13.1□□□□□ -0.31
RAPGEF3-219ENST00000549151 CLIC2O15247 247 aa13.1□□□□□ -0.31
RAPGEF3-219ENST00000549151 EIF3HO15372 352 aaKnown RBP eCLIP13.1□□□□□ -0.31
RAPGEF3-219ENST00000549151 RAD51CO43502 376 aa13.1□□□□□ -0.31
RAPGEF3-219ENST00000549151 PTK2Q05397 1052 aa13.1□□□□□ -0.31
RAPGEF3-219ENST00000549151 SLC20A2Q08357 652 aa13.1□□□□□ -0.31
RAPGEF3-219ENST00000549151 PAK2Q13177 524 aa13.1□□□□□ -0.31
RAPGEF3-219ENST00000549151 NAB2Q15742 525 aa13.1□□□□□ -0.31
RAPGEF3-219ENST00000549151 TRIM59Q8IWR1 403 aa13.1□□□□□ -0.31
RAPGEF3-219ENST00000549151 HDAC9Q9UKV0 1011 aa13.1□□□□□ -0.31
RAPGEF3-219ENST00000549151 RREB1Q92766 1687 aa13.1□□□□□ -0.31
RAPGEF3-219ENST00000549151 CYP11B2P19099 503 aa13.09□□□□□ -0.31
RAPGEF3-219ENST00000549151 RPS6KA1Q15418 735 aa13.09□□□□□ -0.31
RAPGEF3-219ENST00000549151 RC3H1Q5TC82 1133 aaKnown RBP13.09□□□□□ -0.31
RAPGEF3-219ENST00000549151 GJB7Q6PEY0 223 aa13.09□□□□□ -0.31
RAPGEF3-219ENST00000549151 OR2W6PQ8NHA6 318 aa13.09□□□□□ -0.31
RAPGEF3-219ENST00000549151 TBC1D16Q8TBP0 767 aa13.09□□□□□ -0.31
RAPGEF3-219ENST00000549151 PPM1EQ8WY54 764 aa13.09□□□□□ -0.31
RAPGEF3-219ENST00000549151 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.09□□□□□ -0.31
RAPGEF3-219ENST00000549151 GRID2IPA4D2P6 1211 aa13.09□□□□□ -0.31
RAPGEF3-219ENST00000549151 ATP2B4P23634 1241 aa13.09□□□□□ -0.31
RAPGEF3-219ENST00000549151 CEP85LQ5SZL2 805 aa13.09□□□□□ -0.31
RAPGEF3-219ENST00000549151 NT5C3AQ9H0P0 336 aa13.09□□□□□ -0.31
RAPGEF3-219ENST00000549151 IKZF4Q9H2S9 585 aa13.09□□□□□ -0.31
RAPGEF3-219ENST00000549151 PCDHB13Q9Y5F0 798 aa13.09□□□□□ -0.31
RAPGEF3-219ENST00000549151 ABCB11O95342 1321 aa13.09□□□□□ -0.31
RAPGEF3-219ENST00000549151 ZBTB5O15062 677 aa13.08□□□□□ -0.31
RAPGEF3-219ENST00000549151 SMARCA1P28370 1054 aa13.08□□□□□ -0.31
RAPGEF3-219ENST00000549151 ITIH3Q06033 890 aa13.08□□□□□ -0.31
RAPGEF3-219ENST00000549151 ORC2Q13416 577 aaPredicted RBP13.08□□□□□ -0.31
RAPGEF3-219ENST00000549151 ALS2CLQ60I27 953 aa13.08□□□□□ -0.31
RAPGEF3-219ENST00000549151 PPP4R3AQ6IN85 833 aa13.08□□□□□ -0.31
RAPGEF3-219ENST00000549151 ARMCX3Q9UH62 379 aaPredicted RBP13.08□□□□□ -0.31
RAPGEF3-219ENST00000549151 TSKSQ9UJT2 592 aa13.08□□□□□ -0.31
RAPGEF3-219ENST00000549151 DDX60LQ5H9U9 1706 aaKnown RBP13.08□□□□□ -0.31
RAPGEF3-219ENST00000549151 EP400Q96L91 3159 aa13.08□□□□□ -0.32
RAPGEF3-219ENST00000549151 GRIN2DO15399 1336 aa13.08□□□□□ -0.32
RAPGEF3-219ENST00000549151 ZNF233A6NK53 670 aa13.08□□□□□ -0.32
RAPGEF3-219ENST00000549151 G3V3G9 751 aa13.08□□□□□ -0.32
RAPGEF3-219ENST00000549151 NT5C2P49902 561 aa13.08□□□□□ -0.32
RAPGEF3-219ENST00000549151 QRICH1Q2TAL8 776 aa13.08□□□□□ -0.32
RAPGEF3-219ENST00000549151 DCAF8Q5TAQ9 597 aa13.08□□□□□ -0.32
RAPGEF3-219ENST00000549151 SFR1Q86XK3 245 aa13.08□□□□□ -0.32
RAPGEF3-219ENST00000549151 CERS3Q8IU89 383 aa13.08□□□□□ -0.32
RAPGEF3-219ENST00000549151 RNPC3Q96LT9 517 aaKnown RBP13.08□□□□□ -0.32
RAPGEF3-219ENST00000549151 DDX47Q9H0S4 455 aaKnown RBP13.08□□□□□ -0.32
RAPGEF3-219ENST00000549151 RSPH10B2B2RC85 870 aa13.08□□□□□ -0.32
RAPGEF3-219ENST00000549151 hCG_1984214I3L0E3 225 aa13.08□□□□□ -0.32
RAPGEF3-219ENST00000549151 SHOX2O60902 331 aaPredicted RBP13.08□□□□□ -0.32
RAPGEF3-219ENST00000549151 RSPH10BP0C881 870 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms