RNA–Protein interactions for RNA: ENST00000548498.5

SLC48A1-206, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 618 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-206ENST00000548498 OPLAHO14841 1288 aa11.28□□□□□ -0.6
SLC48A1-206ENST00000548498 IFIT3O14879 490 aaKnown RBP11.28□□□□□ -0.6
SLC48A1-206ENST00000548498 SLC27A2O14975 620 aa11.28□□□□□ -0.6
SLC48A1-206ENST00000548498 GRM6O15303 877 aa11.28□□□□□ -0.6
SLC48A1-206ENST00000548498 LINC01565O15544 149 aa11.28□□□□□ -0.6
SLC48A1-206ENST00000548498 EPB41L2O43491 1005 aaKnown RBP11.28□□□□□ -0.6
SLC48A1-206ENST00000548498 DDAH1O94760 285 aa11.28□□□□□ -0.6
SLC48A1-206ENST00000548498 CTNNB1P35222 781 aa11.28□□□□□ -0.6
SLC48A1-206ENST00000548498 TCF15Q12870 199 aa11.28□□□□□ -0.6
SLC48A1-206ENST00000548498 SART3Q15020 963 aaKnown RBP11.28□□□□□ -0.6
SLC48A1-206ENST00000548498 STXBP2Q15833 593 aa11.28□□□□□ -0.6
SLC48A1-206ENST00000548498 HSDL1Q3SXM5 330 aa11.28□□□□□ -0.6
SLC48A1-206ENST00000548498 TMTC2Q8N394 836 aa11.28□□□□□ -0.6
SLC48A1-206ENST00000548498 STAG2Q8N3U4 1231 aa11.28□□□□□ -0.6
SLC48A1-206ENST00000548498 NSUN6Q8TEA1 469 aaKnown RBP11.28□□□□□ -0.6
SLC48A1-206ENST00000548498 RMDN3Q96TC7 470 aa11.28□□□□□ -0.6
SLC48A1-206ENST00000548498 IFIH1Q9BYX4 1025 aaKnown RBP11.28□□□□□ -0.6
SLC48A1-206ENST00000548498 UPF3BQ9BZI7 483 aaKnown RBP11.28□□□□□ -0.6
SLC48A1-206ENST00000548498 LY9Q9HBG7 655 aa11.28□□□□□ -0.6
SLC48A1-206ENST00000548498 MYO10Q9HD67 2058 aa11.28□□□□□ -0.6
SLC48A1-206ENST00000548498 SPDYE4A6NLX3 237 aa11.27□□□□□ -0.61
SLC48A1-206ENST00000548498 ZBTB5O15062 677 aa11.27□□□□□ -0.61
SLC48A1-206ENST00000548498 CYTH3O43739 400 aa11.27□□□□□ -0.61
SLC48A1-206ENST00000548498 RGS20O76081 388 aa11.27□□□□□ -0.61
SLC48A1-206ENST00000548498 HOXC8P31273 242 aa11.27□□□□□ -0.61
SLC48A1-206ENST00000548498 HSD17B4P51659 736 aa11.27□□□□□ -0.61
SLC48A1-206ENST00000548498 TRAF1Q13077 416 aa11.27□□□□□ -0.61
SLC48A1-206ENST00000548498 SMAD4Q13485 552 aaKnown RBP11.27□□□□□ -0.61
SLC48A1-206ENST00000548498 LAMC2Q13753 1193 aa11.27□□□□□ -0.61
SLC48A1-206ENST00000548498 CREB3L3Q68CJ9 461 aa11.27□□□□□ -0.61
SLC48A1-206ENST00000548498 SGMS1Q86VZ5 419 aa11.27□□□□□ -0.61
SLC48A1-206ENST00000548498 MCF2L2Q86YR7 1114 aa11.27□□□□□ -0.61
SLC48A1-206ENST00000548498 SEPT8Q92599 483 aa11.27□□□□□ -0.61
SLC48A1-206ENST00000548498 EDAQ92838 391 aa11.27□□□□□ -0.61
SLC48A1-206ENST00000548498 TMEM87BQ96K49 555 aa11.27□□□□□ -0.61
SLC48A1-206ENST00000548498 IWS1Q96ST2 819 aa11.27□□□□□ -0.61
SLC48A1-206ENST00000548498 POP1Q99575 1024 aaKnown RBP11.27□□□□□ -0.61
SLC48A1-206ENST00000548498 C16orf70Q9BSU1 422 aa11.27□□□□□ -0.61
SLC48A1-206ENST00000548498 SPZ1Q9BXG8 430 aa11.27□□□□□ -0.61
SLC48A1-206ENST00000548498 AMNQ9BXJ7 453 aa11.27□□□□□ -0.61
SLC48A1-206ENST00000548498 SENP2Q9HC62 589 aa11.27□□□□□ -0.61
SLC48A1-206ENST00000548498 ALG13Q9NP73 1137 aaKnown RBP11.27□□□□□ -0.61
SLC48A1-206ENST00000548498 PXMP2Q9NR77 195 aa11.27□□□□□ -0.61
SLC48A1-206ENST00000548498 FAM86C1Q9NVL1 165 aa11.27□□□□□ -0.61
SLC48A1-206ENST00000548498 MRPL11Q9Y3B7 192 aaKnown RBP11.27□□□□□ -0.61
SLC48A1-206ENST00000548498 ERICH2A1L162 156 aa11.26□□□□□ -0.61
SLC48A1-206ENST00000548498 TMEM221A6NGB7 291 aa11.26□□□□□ -0.61
SLC48A1-206ENST00000548498 C5orf67F2Z3F1 127 aa11.26□□□□□ -0.61
SLC48A1-206ENST00000548498 M0R296 226 aa11.26□□□□□ -0.61
SLC48A1-206ENST00000548498 STXBP3O00186 592 aa11.26□□□□□ -0.61
SLC48A1-206ENST00000548498 SH2B2O14492 632 aaPredicted RBP11.26□□□□□ -0.61
SLC48A1-206ENST00000548498 TREHO43280 583 aa11.26□□□□□ -0.61
SLC48A1-206ENST00000548498 PPP1R11O60927 126 aaPredicted RBP11.26□□□□□ -0.61
SLC48A1-206ENST00000548498 CDC45O75419 566 aa11.26□□□□□ -0.61
SLC48A1-206ENST00000548498 EIF3JO75822 258 aaKnown RBP11.26□□□□□ -0.61
SLC48A1-206ENST00000548498 GGPS1O95749 300 aa11.26□□□□□ -0.61
SLC48A1-206ENST00000548498 NR3C2P08235 984 aa11.26□□□□□ -0.61
SLC48A1-206ENST00000548498 MCM5P33992 734 aa11.26□□□□□ -0.61
SLC48A1-206ENST00000548498 PTPN5P54829 565 aa11.26□□□□□ -0.61
SLC48A1-206ENST00000548498 COL9A3Q14050 684 aaPredicted RBP11.26□□□□□ -0.61
SLC48A1-206ENST00000548498 WTAPQ15007 396 aa11.26□□□□□ -0.61
SLC48A1-206ENST00000548498 ARHGEF16Q5VV41 709 aa11.26□□□□□ -0.61
SLC48A1-206ENST00000548498 MYSM1Q5VVJ2 828 aa11.26□□□□□ -0.61
SLC48A1-206ENST00000548498 TEX2Q8IWB9 1127 aa11.26□□□□□ -0.61
SLC48A1-206ENST00000548498 FBXL16Q8N461 479 aa11.26□□□□□ -0.61
SLC48A1-206ENST00000548498 IL31RAQ8NI17 732 aa11.26□□□□□ -0.61
SLC48A1-206ENST00000548498 GPKOWQ92917 476 aaPredicted RBP eCLIP11.26□□□□□ -0.61
SLC48A1-206ENST00000548498 ATP6V0A1Q93050 837 aa11.26□□□□□ -0.61
SLC48A1-206ENST00000548498 ZFP91Q96JP5 570 aaPredicted RBP11.26□□□□□ -0.61
SLC48A1-206ENST00000548498 LZTS2Q9BRK4 669 aa11.26□□□□□ -0.61
SLC48A1-206ENST00000548498 RC3H2Q9HBD1 1191 aaKnown RBP11.26□□□□□ -0.61
SLC48A1-206ENST00000548498 ADGRA3Q8IWK6 1321 aa11.26□□□□□ -0.61
SLC48A1-206ENST00000548498 ZFHX2Q9C0A1 2572 aaPredicted RBP11.25□□□□□ -0.61
SLC48A1-206ENST00000548498 PNMA6FA0A0J9YX94 578 aa11.25□□□□□ -0.61
SLC48A1-206ENST00000548498 C17orf102A2RUQ5 167 aa11.25□□□□□ -0.61
SLC48A1-206ENST00000548498 ST18O60284 1047 aa11.25□□□□□ -0.61
SLC48A1-206ENST00000548498 SMIM10L2AP0DMW4 78 aa11.25□□□□□ -0.61
SLC48A1-206ENST00000548498 SMIM10L2BP0DMW5 78 aa11.25□□□□□ -0.61
SLC48A1-206ENST00000548498 UBA1P22314 1058 aaKnown RBP11.25□□□□□ -0.61
SLC48A1-206ENST00000548498 RCAN1P53805 252 aa11.25□□□□□ -0.61
SLC48A1-206ENST00000548498 EXOSC10Q01780 885 aaKnown RBP11.25□□□□□ -0.61
SLC48A1-206ENST00000548498 SP2Q02086 613 aa11.25□□□□□ -0.61
SLC48A1-206ENST00000548498 CAMK1Q14012 370 aa11.25□□□□□ -0.61
SLC48A1-206ENST00000548498 CELF3Q5SZQ8 465 aaKnown RBP11.25□□□□□ -0.61
SLC48A1-206ENST00000548498 RNF20Q5VTR2 975 aa11.25□□□□□ -0.61
SLC48A1-206ENST00000548498 TRIM67Q6ZTA4 783 aa11.25□□□□□ -0.61
SLC48A1-206ENST00000548498 BMP8AQ7Z5Y6 402 aa11.25□□□□□ -0.61
SLC48A1-206ENST00000548498 CATIPQ7Z7H3 387 aa11.25□□□□□ -0.61
SLC48A1-206ENST00000548498 SKAP1Q86WV1 359 aa11.25□□□□□ -0.61
SLC48A1-206ENST00000548498 FIBCD1Q8N539 461 aa11.25□□□□□ -0.61
SLC48A1-206ENST00000548498 SPATA33Q96N06 139 aa11.25□□□□□ -0.61
SLC48A1-206ENST00000548498 IGFLR1Q9H665 355 aa11.25□□□□□ -0.61
SLC48A1-206ENST00000548498 BCAS3Q9H6U6 928 aa11.25□□□□□ -0.61
SLC48A1-206ENST00000548498 CD207Q9UJ71 328 aa11.25□□□□□ -0.61
SLC48A1-206ENST00000548498 PRC1O43663 620 aa11.24□□□□□ -0.61
SLC48A1-206ENST00000548498 PPFIA4O75335 1185 aa11.24□□□□□ -0.61
SLC48A1-206ENST00000548498 CFBP00751 764 aa11.24□□□□□ -0.61
SLC48A1-206ENST00000548498 LGALS2P05162 132 aa11.24□□□□□ -0.61
SLC48A1-206ENST00000548498 MYCLP12524 364 aaPredicted RBP11.24□□□□□ -0.61
SLC48A1-206ENST00000548498 VCPP55072 806 aaKnown RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms