RNA–Protein interactions for RNA: ENST00000548211.1

RPAP3-205, Transcript of RNA polymerase II associated protein 3, human

TSL 2

Gene RPAP3, Length 555 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPAP3-205	ENST00000548211	PATE3	B3GLJ2	98 aa		5.98	□□□□□ -1.45
RPAP3-205	ENST00000548211	AGRP	O00253	132 aa		5.98	□□□□□ -1.45
RPAP3-205	ENST00000548211	PRODH	O43272	600 aa		5.98	□□□□□ -1.45
RPAP3-205	ENST00000548211	MAFK	O60675	156 aa		5.98	□□□□□ -1.45
RPAP3-205	ENST00000548211	AMH	P03971	560 aa		5.98	□□□□□ -1.45
RPAP3-205	ENST00000548211	SKIDA1	Q1XH10	827 aa		5.98	□□□□□ -1.45
RPAP3-205	ENST00000548211	PAN2	Q504Q3	1202 aa	Known RBP	5.98	□□□□□ -1.45
RPAP3-205	ENST00000548211	GPR155	Q7Z3F1	870 aa		5.98	□□□□□ -1.45
RPAP3-205	ENST00000548211	TRIM48	Q8IWZ4	208 aa		5.98	□□□□□ -1.45
RPAP3-205	ENST00000548211	ZFPM1	Q8IX07	1006 aa		5.98	□□□□□ -1.45
RPAP3-205	ENST00000548211	STPG3	Q8N7X2	389 aa		5.98	□□□□□ -1.45
RPAP3-205	ENST00000548211	TTLL11	Q8NHH1	800 aa		5.98	□□□□□ -1.45
RPAP3-205	ENST00000548211	OSBP2	Q969R2	916 aa		5.98	□□□□□ -1.45
RPAP3-205	ENST00000548211	GNRHR2	Q96P88	292 aa		5.98	□□□□□ -1.45
RPAP3-205	ENST00000548211	WRNIP1	Q96S55	665 aa		5.98	□□□□□ -1.45
RPAP3-205	ENST00000548211	DLL4	Q9NR61	685 aa		5.98	□□□□□ -1.45
RPAP3-205	ENST00000548211	ARHGEF4	Q9NR80	690 aa		5.98	□□□□□ -1.45
RPAP3-205	ENST00000548211	ZFP69B	Q9UJL9	534 aa		5.98	□□□□□ -1.45
RPAP3-205	ENST00000548211	CNOT4	O95628	575 aa	Known RBP	5.97	□□□□□ -1.45
RPAP3-205	ENST00000548211	KNG1	P01042	644 aa		5.97	□□□□□ -1.45
RPAP3-205	ENST00000548211	SLPI	P03973	132 aa		5.97	□□□□□ -1.45
RPAP3-205	ENST00000548211	FAH	P16930	419 aa		5.97	□□□□□ -1.45
RPAP3-205	ENST00000548211	TACR2	P21452	398 aa		5.97	□□□□□ -1.45
RPAP3-205	ENST00000548211	GRK2	P25098	689 aa		5.97	□□□□□ -1.45
RPAP3-205	ENST00000548211	DNAJA1	P31689	397 aa	Known RBP	5.97	□□□□□ -1.45
RPAP3-205	ENST00000548211	GRK3	P35626	688 aa		5.97	□□□□□ -1.45
RPAP3-205	ENST00000548211	ARID5A	Q03989	594 aa		5.97	□□□□□ -1.45
RPAP3-205	ENST00000548211	R3HDM1	Q15032	1099 aa	Known RBP	5.97	□□□□□ -1.45
RPAP3-205	ENST00000548211	SMAD2	Q15796	467 aa	Known RBP	5.97	□□□□□ -1.45
RPAP3-205	ENST00000548211	DDR2	Q16832	855 aa		5.97	□□□□□ -1.45
RPAP3-205	ENST00000548211	YOD1	Q5VVQ6	348 aa	Predicted RBP	5.97	□□□□□ -1.45
RPAP3-205	ENST00000548211	SLFN13	Q68D06	897 aa		5.97	□□□□□ -1.45
RPAP3-205	ENST00000548211	CYP4F22	Q6NT55	531 aa		5.97	□□□□□ -1.45
RPAP3-205	ENST00000548211	CRIP3	Q6Q6R5	217 aa		5.97	□□□□□ -1.45
RPAP3-205	ENST00000548211	LBX2	Q6XYB7	198 aa		5.97	□□□□□ -1.45
RPAP3-205	ENST00000548211	ANKS3	Q6ZW76	656 aa		5.97	□□□□□ -1.45
RPAP3-205	ENST00000548211	UHMK1	Q8TAS1	419 aa	Known RBP	5.97	□□□□□ -1.45
RPAP3-205	ENST00000548211		Q8TCH9	128 aa		5.97	□□□□□ -1.45
RPAP3-205	ENST00000548211	SORCS2	Q96PQ0	1159 aa		5.97	□□□□□ -1.45
RPAP3-205	ENST00000548211	ZNF747	Q9BV97	191 aa		5.97	□□□□□ -1.45
RPAP3-205	ENST00000548211	SRRD	Q9UH36	339 aa		5.97	□□□□□ -1.45
RPAP3-205	ENST00000548211	PTPN22	Q9Y2R2	807 aa		5.97	□□□□□ -1.45
RPAP3-205	ENST00000548211	KIF21A	Q7Z4S6	1674 aa		5.96	□□□□□ -1.46
RPAP3-205	ENST00000548211	ACOT7	O00154	380 aa		5.96	□□□□□ -1.46
RPAP3-205	ENST00000548211	ZNF623	O75123	536 aa		5.96	□□□□□ -1.46
RPAP3-205	ENST00000548211	IL18BP	O95998	194 aa		5.96	□□□□□ -1.46
RPAP3-205	ENST00000548211	PFKP	Q01813	784 aa		5.96	□□□□□ -1.46
RPAP3-205	ENST00000548211	GNL2	Q13823	731 aa	Known RBP	5.96	□□□□□ -1.46
RPAP3-205	ENST00000548211	HSP90AA2P	Q14568	343 aa	Predicted RBP	5.96	□□□□□ -1.46
RPAP3-205	ENST00000548211	SPDYA	Q5MJ70	313 aa		5.96	□□□□□ -1.46
RPAP3-205	ENST00000548211	CD276	Q5ZPR3	534 aa		5.96	□□□□□ -1.46
RPAP3-205	ENST00000548211	RSPO2	Q6UXX9	243 aa	Predicted RBP	5.96	□□□□□ -1.46
RPAP3-205	ENST00000548211		Q6ZUG5	572 aa		5.96	□□□□□ -1.46
RPAP3-205	ENST00000548211	ASXL2	Q76L83	1435 aa		5.96	□□□□□ -1.46
RPAP3-205	ENST00000548211	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	5.96	□□□□□ -1.46
RPAP3-205	ENST00000548211	BAZ1B	Q9UIG0	1483 aa	Known RBP	5.96	□□□□□ -1.46
RPAP3-205	ENST00000548211	KLF4	O43474	513 aa		5.95	□□□□□ -1.46
RPAP3-205	ENST00000548211	FBXO21	O94952	628 aa		5.95	□□□□□ -1.46
RPAP3-205	ENST00000548211	GNAT1	P11488	350 aa		5.95	□□□□□ -1.46
RPAP3-205	ENST00000548211	PABPC1	P11940	636 aa	Known RBP	5.95	□□□□□ -1.46
RPAP3-205	ENST00000548211	TCF3	P15923	654 aa		5.95	□□□□□ -1.46
RPAP3-205	ENST00000548211	CSF2RB	P32927	897 aa		5.95	□□□□□ -1.46
RPAP3-205	ENST00000548211	HABP4	Q5JVS0	413 aa	Known RBP	5.95	□□□□□ -1.46
RPAP3-205	ENST00000548211	RALYL	Q86SE5	291 aa	Known RBP	5.95	□□□□□ -1.46
RPAP3-205	ENST00000548211	DCAF4	Q8WV16	495 aa		5.95	□□□□□ -1.46
RPAP3-205	ENST00000548211	ZNF428	Q96B54	188 aa		5.95	□□□□□ -1.46
RPAP3-205	ENST00000548211	AARSD1	Q9BTE6	412 aa	Known RBP	5.95	□□□□□ -1.46
RPAP3-205	ENST00000548211	CD244	Q9BZW8	370 aa		5.95	□□□□□ -1.46
RPAP3-205	ENST00000548211	VPS11	Q9H270	941 aa		5.95	□□□□□ -1.46
RPAP3-205	ENST00000548211	KCND1	Q9NSA2	647 aa		5.95	□□□□□ -1.46
RPAP3-205	ENST00000548211	ARHGAP20	Q9P2F6	1191 aa		5.95	□□□□□ -1.46
RPAP3-205	ENST00000548211	R3HCC1	Q9Y3T6	440 aa	Known RBP	5.95	□□□□□ -1.46
RPAP3-205	ENST00000548211	TCRBV5S4A2T	A0A5A2	114 aa		5.94	□□□□□ -1.46
RPAP3-205	ENST00000548211	FOXS1	O43638	330 aa		5.94	□□□□□ -1.46
RPAP3-205	ENST00000548211	ACVRL1	P37023	503 aa		5.94	□□□□□ -1.46
RPAP3-205	ENST00000548211	KRTAP5-3	Q6L8H2	238 aa		5.94	□□□□□ -1.46
RPAP3-205	ENST00000548211	NSMF	Q6X4W1	530 aa		5.94	□□□□□ -1.46
RPAP3-205	ENST00000548211	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	5.94	□□□□□ -1.46
RPAP3-205	ENST00000548211	SH3RF2	Q8TEC5	729 aa		5.94	□□□□□ -1.46
RPAP3-205	ENST00000548211	LRRC37B	Q96QE4	947 aa		5.94	□□□□□ -1.46
RPAP3-205	ENST00000548211	CDK5RAP1	Q96SZ6	601 aa	Known RBP	5.94	□□□□□ -1.46
RPAP3-205	ENST00000548211	TACO1	Q9BSH4	297 aa	Known RBP	5.94	□□□□□ -1.46
RPAP3-205	ENST00000548211	IPPK	Q9H8X2	491 aa		5.94	□□□□□ -1.46
RPAP3-205	ENST00000548211	DSE	Q9UL01	958 aa		5.94	□□□□□ -1.46
RPAP3-205	ENST00000548211	SMARCA4	P51532	1647 aa		5.94	□□□□□ -1.46
RPAP3-205	ENST00000548211	ZNF839	A8K0R7	811 aa		5.93	□□□□□ -1.46
RPAP3-205	ENST00000548211	SOD2	P04179	222 aa		5.93	□□□□□ -1.46
RPAP3-205	ENST00000548211	ENO2	P09104	434 aa	Predicted RBP	5.93	□□□□□ -1.46
RPAP3-205	ENST00000548211	ZNF888	P0CJ79	500 aa	Predicted RBP	5.93	□□□□□ -1.46
RPAP3-205	ENST00000548211	FGFR1	P11362	822 aa		5.93	□□□□□ -1.46
RPAP3-205	ENST00000548211	GDF5	P43026	501 aa		5.93	□□□□□ -1.46
RPAP3-205	ENST00000548211	SELENOP	P49908	381 aa		5.93	□□□□□ -1.46
RPAP3-205	ENST00000548211	GPR85	P60893	370 aa		5.93	□□□□□ -1.46
RPAP3-205	ENST00000548211	SPIRE1	Q08AE8	756 aa		5.93	□□□□□ -1.46
RPAP3-205	ENST00000548211	KIZ	Q2M2Z5	673 aa		5.93	□□□□□ -1.46
RPAP3-205	ENST00000548211	STYK1	Q6J9G0	422 aa		5.93	□□□□□ -1.46
RPAP3-205	ENST00000548211	TCTN3	Q6NUS6	607 aa		5.93	□□□□□ -1.46
RPAP3-205	ENST00000548211	SGSM3	Q96HU1	749 aa		5.93	□□□□□ -1.46
RPAP3-205	ENST00000548211	AJUBA	Q96IF1	538 aa		5.93	□□□□□ -1.46
RPAP3-205	ENST00000548211	SLC39A2	Q9NP94	309 aa		5.93	□□□□□ -1.46

Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms