RNA–Protein interactions for RNA: ENST00000548132.1

GCN1-204, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-204ENST00000548132 RIC8AQ9NPQ8 531 aa14.29□□□□□ -0.12
GCN1-204ENST00000548132 TMEM260Q9NX78 707 aa14.29□□□□□ -0.12
GCN1-204ENST00000548132 PKD2L1Q9P0L9 805 aa14.29□□□□□ -0.12
GCN1-204ENST00000548132 PCDHA6Q9UN73 950 aa14.29□□□□□ -0.12
GCN1-204ENST00000548132 PCDHA8Q9Y5H6 950 aa14.29□□□□□ -0.12
GCN1-204ENST00000548132 EMSYQ7Z589 1322 aa14.29□□□□□ -0.12
GCN1-204ENST00000548132 TCF20Q9UGU0 1960 aaKnown RBP14.29□□□□□ -0.12
GCN1-204ENST00000548132 EVPLQ92817 2033 aa14.29□□□□□ -0.12
GCN1-204ENST00000548132 RFXAPO00287 272 aa14.28□□□□□ -0.12
GCN1-204ENST00000548132 NOP56O00567 594 aaKnown RBP14.28□□□□□ -0.12
GCN1-204ENST00000548132 CTSHP09668 335 aa14.28□□□□□ -0.12
GCN1-204ENST00000548132 TCF7P36402 384 aaPredicted RBP14.28□□□□□ -0.12
GCN1-204ENST00000548132 TTC3P53804 2025 aa14.28□□□□□ -0.12
GCN1-204ENST00000548132 MTMR1Q13613 665 aa14.28□□□□□ -0.12
GCN1-204ENST00000548132 PKN1Q16512 942 aa14.28□□□□□ -0.12
GCN1-204ENST00000548132 ARID2Q68CP9 1835 aa14.28□□□□□ -0.12
GCN1-204ENST00000548132 KRT40Q6A162 431 aa14.28□□□□□ -0.12
GCN1-204ENST00000548132 ATP6V0A1Q93050 837 aa14.28□□□□□ -0.12
GCN1-204ENST00000548132 JAKMIP1Q96N16 626 aaKnown RBP14.28□□□□□ -0.12
GCN1-204ENST00000548132 CERS4Q9HA82 394 aa14.28□□□□□ -0.12
GCN1-204ENST00000548132 JADE2Q9NQC1 790 aa14.28□□□□□ -0.12
GCN1-204ENST00000548132 SETD4Q9NVD3 440 aa14.28□□□□□ -0.12
GCN1-204ENST00000548132 BARHL2Q9NY43 387 aa14.28□□□□□ -0.12
GCN1-204ENST00000548132 hCG_1984214I3L0E3 225 aa14.27□□□□□ -0.13
GCN1-204ENST00000548132 LGR5O75473 907 aa14.27□□□□□ -0.13
GCN1-204ENST00000548132 GJB5O95377 273 aa14.27□□□□□ -0.13
GCN1-204ENST00000548132 ADD1P35611 737 aaKnown RBP14.27□□□□□ -0.13
GCN1-204ENST00000548132 SREBF1P36956 1147 aa14.27□□□□□ -0.13
GCN1-204ENST00000548132 THPOP40225 353 aa14.27□□□□□ -0.13
GCN1-204ENST00000548132 NAPAP54920 295 aa14.27□□□□□ -0.13
GCN1-204ENST00000548132 MGAT3Q09327 533 aa14.27□□□□□ -0.13
GCN1-204ENST00000548132 KRT32Q14532 448 aa14.27□□□□□ -0.13
GCN1-204ENST00000548132 NTRK3Q16288 839 aa14.27□□□□□ -0.13
GCN1-204ENST00000548132 PLEKHG4Q58EX7 1191 aa14.27□□□□□ -0.13
GCN1-204ENST00000548132 UTP14CQ5TAP6 766 aaKnown RBP14.27□□□□□ -0.13
GCN1-204ENST00000548132 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.27□□□□□ -0.13
GCN1-204ENST00000548132 NLRX1Q86UT6 975 aa14.27□□□□□ -0.13
GCN1-204ENST00000548132 FBXL16Q8N461 479 aa14.27□□□□□ -0.13
GCN1-204ENST00000548132 ZNF713Q8N859 430 aaPredicted RBP14.27□□□□□ -0.13
GCN1-204ENST00000548132 BRF1Q92994 677 aa14.27□□□□□ -0.13
GCN1-204ENST00000548132 ZBTB10Q96DT7 871 aa14.27□□□□□ -0.13
GCN1-204ENST00000548132 USP26Q9BXU7 913 aa14.27□□□□□ -0.13
GCN1-204ENST00000548132 IGLV3-22A0A075B6J6 115 aa14.26□□□□□ -0.13
GCN1-204ENST00000548132 MBLAC1A4D2B0 266 aaPredicted RBP14.26□□□□□ -0.13
GCN1-204ENST00000548132 SPDYE3A6NKU9 549 aa14.26□□□□□ -0.13
GCN1-204ENST00000548132 CAND2O75155 1236 aa14.26□□□□□ -0.13
GCN1-204ENST00000548132 PARNO95453 639 aaKnown RBP14.26□□□□□ -0.13
GCN1-204ENST00000548132 ARP10275 920 aa14.26□□□□□ -0.13
GCN1-204ENST00000548132 RPS6KB1P23443 525 aa14.26□□□□□ -0.13
GCN1-204ENST00000548132 KCNJ6P48051 423 aa14.26□□□□□ -0.13
GCN1-204ENST00000548132 ADCY7P51828 1080 aa14.26□□□□□ -0.13
GCN1-204ENST00000548132 PFKFB3Q16875 520 aaPredicted RBP14.26□□□□□ -0.13
GCN1-204ENST00000548132 MARCH8Q5T0T0 291 aa14.26□□□□□ -0.13
GCN1-204ENST00000548132 Q6ZUG5 572 aa14.26□□□□□ -0.13
GCN1-204ENST00000548132 DBF4BQ8NFT6 615 aa14.26□□□□□ -0.13
GCN1-204ENST00000548132 GDPD5Q8WTR4 605 aa14.26□□□□□ -0.13
GCN1-204ENST00000548132 CCDC136Q96JN2 1154 aa14.26□□□□□ -0.13
GCN1-204ENST00000548132 KCNH7Q9NS40 1196 aa14.26□□□□□ -0.13
GCN1-204ENST00000548132 ZNF215Q9UL58 517 aaPredicted RBP14.26□□□□□ -0.13
GCN1-204ENST00000548132 MTCH2Q9Y6C9 303 aa14.26□□□□□ -0.13
GCN1-204ENST00000548132 FNDC1Q4ZHG4 1894 aaPredicted RBP14.26□□□□□ -0.13
GCN1-204ENST00000548132 PLXNA4Q9HCM2 1894 aa14.25□□□□□ -0.13
GCN1-204ENST00000548132 NFASCO94856 1347 aa14.25□□□□□ -0.13
GCN1-204ENST00000548132 ABHD14A-ACY1A0A1B0GW23 586 aa14.25□□□□□ -0.13
GCN1-204ENST00000548132 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.25□□□□□ -0.13
GCN1-204ENST00000548132 ESYT2A0FGR8 921 aa14.25□□□□□ -0.13
GCN1-204ENST00000548132 LINC01553A4QN01 128 aa14.25□□□□□ -0.13
GCN1-204ENST00000548132 RSPH10B2B2RC85 870 aa14.25□□□□□ -0.13
GCN1-204ENST00000548132 FAM86B1E9PN63 330 aa14.25□□□□□ -0.13
GCN1-204ENST00000548132 EDIL3O43854 480 aa14.25□□□□□ -0.13
GCN1-204ENST00000548132 CCNE2O96020 404 aa14.25□□□□□ -0.13
GCN1-204ENST00000548132 FAM86B2P0C5J1 330 aa14.25□□□□□ -0.13
GCN1-204ENST00000548132 RSPH10BP0C881 870 aa14.25□□□□□ -0.13
GCN1-204ENST00000548132 POU3F3P20264 500 aaPredicted RBP14.25□□□□□ -0.13
GCN1-204ENST00000548132 MARK3P27448 753 aa14.25□□□□□ -0.13
GCN1-204ENST00000548132 METAP2P50579 478 aaKnown RBP eCLIP14.25□□□□□ -0.13
GCN1-204ENST00000548132 ARHGAP4P98171 946 aa14.25□□□□□ -0.13
GCN1-204ENST00000548132 TOB2Q14106 344 aaPredicted RBP14.25□□□□□ -0.13
GCN1-204ENST00000548132 FAM26DQ5JW98 314 aa14.25□□□□□ -0.13
GCN1-204ENST00000548132 SP7Q8TDD2 431 aaPredicted RBP14.25□□□□□ -0.13
GCN1-204ENST00000548132 LINC01599Q8WXQ3 324 aa14.25□□□□□ -0.13
GCN1-204ENST00000548132 CDHR1Q96JP9 859 aa14.25□□□□□ -0.13
GCN1-204ENST00000548132 MXRA8Q9BRK3 442 aa14.25□□□□□ -0.13
GCN1-204ENST00000548132 RC3H2Q9HBD1 1191 aaKnown RBP14.25□□□□□ -0.13
GCN1-204ENST00000548132 JPH1Q9HDC5 661 aaPredicted RBP14.25□□□□□ -0.13
GCN1-204ENST00000548132 V9GY48 417 aaPredicted RBP14.25□□□□□ -0.13
GCN1-204ENST00000548132 TLL1O43897 1013 aa14.24□□□□□ -0.13
GCN1-204ENST00000548132 PPFIA3O75145 1194 aa14.24□□□□□ -0.13
GCN1-204ENST00000548132 SCG2P13521 617 aa14.24□□□□□ -0.13
GCN1-204ENST00000548132 EVCP57679 992 aa14.24□□□□□ -0.13
GCN1-204ENST00000548132 HTRA4P83105 476 aaPredicted RBP14.24□□□□□ -0.13
GCN1-204ENST00000548132 PPFIA1Q13136 1202 aa14.24□□□□□ -0.13
GCN1-204ENST00000548132 GRB10Q13322 594 aa14.24□□□□□ -0.13
GCN1-204ENST00000548132 AP3B2Q13367 1082 aa14.24□□□□□ -0.13
GCN1-204ENST00000548132 CCDC85BQ15834 202 aaPredicted RBP14.24□□□□□ -0.13
GCN1-204ENST00000548132 GRIK4Q16099 956 aa14.24□□□□□ -0.13
GCN1-204ENST00000548132 TEX2Q8IWB9 1127 aa14.24□□□□□ -0.13
GCN1-204ENST00000548132 PPM1EQ8WY54 764 aa14.24□□□□□ -0.13
GCN1-204ENST00000548132 ARNTL2Q8WYA1 636 aa14.24□□□□□ -0.13
GCN1-204ENST00000548132 PHKBQ93100 1093 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms