RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 HERC4Q5GLZ8 1057 aaPredicted RBP14.94□□□□□ -0.02
PTCH1-215ENST00000547672 FAM26FQ5R3K3 315 aa14.94□□□□□ -0.02
PTCH1-215ENST00000547672 CENPPQ6IPU0 288 aa14.94□□□□□ -0.02
PTCH1-215ENST00000547672 ZNF746Q6NUN9 644 aaPredicted RBP14.94□□□□□ -0.02
PTCH1-215ENST00000547672 B3GNT9Q6UX72 402 aa14.94□□□□□ -0.02
PTCH1-215ENST00000547672 SLC30A10Q6XR72 485 aa14.94□□□□□ -0.02
PTCH1-215ENST00000547672 PPP4R3CPQ6ZMV5 832 aa14.94□□□□□ -0.02
PTCH1-215ENST00000547672 TRMT44Q8IYL2 757 aaKnown RBP14.94□□□□□ -0.02
PTCH1-215ENST00000547672 CSGALNACT2Q8N6G5 542 aa14.94□□□□□ -0.02
PTCH1-215ENST00000547672 CCDC112Q8NEF3 446 aa14.94□□□□□ -0.02
PTCH1-215ENST00000547672 DNAJC19Q96DA6 116 aa14.94□□□□□ -0.02
PTCH1-215ENST00000547672 SENP7Q9BQF6 1050 aa14.94□□□□□ -0.02
PTCH1-215ENST00000547672 SPATC1LQ9H0A9 340 aa14.94□□□□□ -0.02
PTCH1-215ENST00000547672 ASCC2Q9H1I8 757 aaPredicted RBP14.94□□□□□ -0.02
PTCH1-215ENST00000547672 MROH8Q9H579 483 aa14.94□□□□□ -0.02
PTCH1-215ENST00000547672 SAMSN1Q9NSI8 373 aaKnown RBP14.94□□□□□ -0.02
PTCH1-215ENST00000547672 KCNG1Q9UIX4 513 aa14.94□□□□□ -0.02
PTCH1-215ENST00000547672 GDAQ9Y2T3 454 aa14.94□□□□□ -0.02
PTCH1-215ENST00000547672 RIPK3Q9Y572 518 aa14.94□□□□□ -0.02
PTCH1-215ENST00000547672 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.94□□□□□ -0.02
PTCH1-215ENST00000547672 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.94□□□□□ -0.02
PTCH1-215ENST00000547672 RLFQ13129 1914 aa14.94□□□□□ -0.02
PTCH1-215ENST00000547672 NFASCO94856 1347 aa14.93□□□□□ -0.02
PTCH1-215ENST00000547672 A0A1B0GTH6 734 aa14.93□□□□□ -0.02
PTCH1-215ENST00000547672 POTEFA5A3E0 1075 aa14.93□□□□□ -0.02
PTCH1-215ENST00000547672 WDR64B1ANS9 1081 aa14.93□□□□□ -0.02
PTCH1-215ENST00000547672 GNA14O95837 355 aa14.93□□□□□ -0.02
PTCH1-215ENST00000547672 POTEIP0CG38 1075 aa14.93□□□□□ -0.02
PTCH1-215ENST00000547672 SFPQP23246 707 aaKnown RBP eCLIP14.93□□□□□ -0.02
PTCH1-215ENST00000547672 CLCN1P35523 988 aa14.93□□□□□ -0.02
PTCH1-215ENST00000547672 QARSP47897 775 aaKnown RBP14.93□□□□□ -0.02
PTCH1-215ENST00000547672 HERVK_113P62684 666 aa14.93□□□□□ -0.02
PTCH1-215ENST00000547672 MRPS9P82933 396 aaKnown RBP14.93□□□□□ -0.02
PTCH1-215ENST00000547672 EHHADHQ08426 723 aa14.93□□□□□ -0.02
PTCH1-215ENST00000547672 STK4Q13043 487 aa14.93□□□□□ -0.02
PTCH1-215ENST00000547672 TRIM14Q14142 442 aa14.93□□□□□ -0.02
PTCH1-215ENST00000547672 NR1I3Q14994 352 aa14.93□□□□□ -0.02
PTCH1-215ENST00000547672 ECM1Q16610 540 aa14.93□□□□□ -0.02
PTCH1-215ENST00000547672 TCP11X2Q5H9J9 407 aa14.93□□□□□ -0.02
PTCH1-215ENST00000547672 TREML2Q5T2D2 321 aa14.93□□□□□ -0.02
PTCH1-215ENST00000547672 SPECC1LQ69YQ0 1117 aa14.93□□□□□ -0.02
PTCH1-215ENST00000547672 KCNV1Q6PIU1 500 aa14.93□□□□□ -0.02
PTCH1-215ENST00000547672 POTEGQ6S5H5 508 aa14.93□□□□□ -0.02
PTCH1-215ENST00000547672 POTEEQ6S8J3 1075 aa14.93□□□□□ -0.02
PTCH1-215ENST00000547672 TMC6Q7Z403 805 aa14.93□□□□□ -0.02
PTCH1-215ENST00000547672 KCNK18Q7Z418 384 aa14.93□□□□□ -0.02
PTCH1-215ENST00000547672 FILIP1Q7Z7B0 1213 aa14.93□□□□□ -0.02
PTCH1-215ENST00000547672 VSTM4Q8IW00 320 aa14.93□□□□□ -0.02
PTCH1-215ENST00000547672 SMAP1Q8IYB5 467 aaPredicted RBP14.93□□□□□ -0.02
PTCH1-215ENST00000547672 SMYD4Q8IYR2 804 aaPredicted RBP14.93□□□□□ -0.02
PTCH1-215ENST00000547672 SLC17A8Q8NDX2 589 aa14.93□□□□□ -0.02
PTCH1-215ENST00000547672 SHCBP1Q8NEM2 672 aa14.93□□□□□ -0.02
PTCH1-215ENST00000547672 GJA10Q969M2 543 aa14.93□□□□□ -0.02
PTCH1-215ENST00000547672 IQCDQ96DY2 449 aa14.93□□□□□ -0.02
PTCH1-215ENST00000547672 DYDC2Q96IM9 177 aa14.93□□□□□ -0.02
PTCH1-215ENST00000547672 INPP4AQ96PE3 977 aaPredicted RBP14.93□□□□□ -0.02
PTCH1-215ENST00000547672 UNC45AQ9H3U1 944 aa14.93□□□□□ -0.02
PTCH1-215ENST00000547672 A1CFQ9NQ94 594 aaKnown RBP14.93□□□□□ -0.02
PTCH1-215ENST00000547672 DBR1Q9UK59 544 aaKnown RBP14.93□□□□□ -0.02
PTCH1-215ENST00000547672 ODF2LQ9ULJ1 636 aa14.93□□□□□ -0.02
PTCH1-215ENST00000547672 SAMM50Q9Y512 469 aa14.93□□□□□ -0.02
PTCH1-215ENST00000547672 LOXHD1Q8IVV2 1947 aa14.92□□□□□ -0.02
PTCH1-215ENST00000547672 FRMD3A2A2Y4 597 aa14.92□□□□□ -0.02
PTCH1-215ENST00000547672 TESPA1A2RU30 521 aaPredicted RBP14.92□□□□□ -0.02
PTCH1-215ENST00000547672 ARHGEF35A5YM69 484 aa14.92□□□□□ -0.02
PTCH1-215ENST00000547672 KCNJ18B7U540 433 aa14.92□□□□□ -0.02
PTCH1-215ENST00000547672 POTEB2H3BUK9 544 aa14.92□□□□□ -0.02
PTCH1-215ENST00000547672 EML1O00423 815 aa14.92□□□□□ -0.02
PTCH1-215ENST00000547672 N4BP3O15049 544 aa14.92□□□□□ -0.02
PTCH1-215ENST00000547672 CCP110O43303 1012 aa14.92□□□□□ -0.02
PTCH1-215ENST00000547672 PTGS1P23219 599 aa14.92□□□□□ -0.02
PTCH1-215ENST00000547672 COASYQ13057 564 aa14.92□□□□□ -0.02
PTCH1-215ENST00000547672 KCNJ12Q14500 433 aa14.92□□□□□ -0.02
PTCH1-215ENST00000547672 TTI2Q6NXR4 508 aa14.92□□□□□ -0.02
PTCH1-215ENST00000547672 OTUD6AQ7L8S5 288 aa14.92□□□□□ -0.02
PTCH1-215ENST00000547672 PPFIBP1Q86W92 1011 aa14.92□□□□□ -0.02
PTCH1-215ENST00000547672 LRRC8AQ8IWT6 810 aa14.92□□□□□ -0.02
PTCH1-215ENST00000547672 LRRC15Q8TF66 581 aa14.92□□□□□ -0.02
PTCH1-215ENST00000547672 CLMNQ96JQ2 1002 aa14.92□□□□□ -0.02
PTCH1-215ENST00000547672 CCDC43Q96MW1 224 aaKnown RBP14.92□□□□□ -0.02
PTCH1-215ENST00000547672 SRRTQ9BXP5 876 aaKnown RBP14.92□□□□□ -0.02
PTCH1-215ENST00000547672 BHMT2Q9H2M3 363 aa14.92□□□□□ -0.02
PTCH1-215ENST00000547672 SLC39A2Q9NP94 309 aa14.92□□□□□ -0.02
PTCH1-215ENST00000547672 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.92□□□□□ -0.02
PTCH1-215ENST00000547672 LOC285556D6RIA3 1793 aa14.92□□□□□ -0.02
PTCH1-215ENST00000547672 DHX15O43143 795 aaKnown RBP14.91□□□□□ -0.02
PTCH1-215ENST00000547672 CHMP2AO43633 222 aa14.91□□□□□ -0.02
PTCH1-215ENST00000547672 TGFB3P10600 412 aa14.91□□□□□ -0.02
PTCH1-215ENST00000547672 GCLCP48506 637 aaPredicted RBP14.91□□□□□ -0.02
PTCH1-215ENST00000547672 PSMC5P62195 406 aa14.91□□□□□ -0.02
PTCH1-215ENST00000547672 FKBP3Q00688 224 aaKnown RBP14.91□□□□□ -0.02
PTCH1-215ENST00000547672 CYP4A11Q02928 519 aa14.91□□□□□ -0.02
PTCH1-215ENST00000547672 ALCAMQ13740 583 aa14.91□□□□□ -0.02
PTCH1-215ENST00000547672 GIT2Q14161 759 aa14.91□□□□□ -0.02
PTCH1-215ENST00000547672 NCAPG2Q86XI2 1143 aa14.91□□□□□ -0.02
PTCH1-215ENST00000547672 C4orf19Q8IY42 314 aa14.91□□□□□ -0.02
PTCH1-215ENST00000547672 ATP6V0A1Q93050 837 aa14.91□□□□□ -0.02
PTCH1-215ENST00000547672 WNK4Q96J92 1243 aa14.91□□□□□ -0.02
PTCH1-215ENST00000547672 CEP63Q96MT8 703 aa14.91□□□□□ -0.02
PTCH1-215ENST00000547672 GBA2Q9HCG7 927 aaPredicted RBP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms