RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 TRIM55Q9BYV6 548 aa5.91□□□□□ -1.46
SCAF11-210ENST00000547654 METTL14Q9HCE5 456 aaKnown RBP5.91□□□□□ -1.46
SCAF11-210ENST00000547654 FTSJ1Q9UET6 329 aa5.91□□□□□ -1.46
SCAF11-210ENST00000547654 CROTQ9UKG9 612 aa5.91□□□□□ -1.46
SCAF11-210ENST00000547654 ZNF652Q9Y2D9 606 aa5.91□□□□□ -1.46
SCAF11-210ENST00000547654 TADA3O75528 432 aa5.9□□□□□ -1.46
SCAF11-210ENST00000547654 SNRPB2P08579 225 aaKnown RBP5.9□□□□□ -1.46
SCAF11-210ENST00000547654 FGFR1P11362 822 aa5.9□□□□□ -1.46
SCAF11-210ENST00000547654 IL13P35225 146 aa5.9□□□□□ -1.46
SCAF11-210ENST00000547654 ACVRL1P37023 503 aa5.9□□□□□ -1.46
SCAF11-210ENST00000547654 BCL6P41182 706 aa5.9□□□□□ -1.46
SCAF11-210ENST00000547654 GTF2A2P52657 109 aa5.9□□□□□ -1.46
SCAF11-210ENST00000547654 EPHB4P54760 987 aa5.9□□□□□ -1.46
SCAF11-210ENST00000547654 EMC4Q5J8M3 183 aa5.9□□□□□ -1.46
SCAF11-210ENST00000547654 CEP68Q76N32 757 aa5.9□□□□□ -1.46
SCAF11-210ENST00000547654 KBTBD2Q8IY47 623 aa5.9□□□□□ -1.46
SCAF11-210ENST00000547654 DIO2Q92813 273 aa5.9□□□□□ -1.46
SCAF11-210ENST00000547654 TOE1Q96GM8 510 aaKnown RBP5.9□□□□□ -1.46
SCAF11-210ENST00000547654 MENTQ9BUN1 341 aa5.9□□□□□ -1.46
SCAF11-210ENST00000547654 ZNF747Q9BV97 191 aa5.9□□□□□ -1.46
SCAF11-210ENST00000547654 PDGFDQ9GZP0 370 aaPredicted RBP5.9□□□□□ -1.46
SCAF11-210ENST00000547654 CD248Q9HCU0 757 aa5.9□□□□□ -1.46
SCAF11-210ENST00000547654 WASF3Q9UPY6 502 aa5.9□□□□□ -1.46
SCAF11-210ENST00000547654 PCDHB4Q9Y5E5 795 aa5.9□□□□□ -1.46
SCAF11-210ENST00000547654 GPR42O15529 346 aa5.89□□□□□ -1.47
SCAF11-210ENST00000547654 LTBRP36941 435 aa5.89□□□□□ -1.47
SCAF11-210ENST00000547654 ECI1P42126 302 aa5.89□□□□□ -1.47
SCAF11-210ENST00000547654 PPP2CBP62714 309 aa5.89□□□□□ -1.47
SCAF11-210ENST00000547654 PPP2CAP67775 309 aa5.89□□□□□ -1.47
SCAF11-210ENST00000547654 KCNAB2Q13303 367 aa5.89□□□□□ -1.47
SCAF11-210ENST00000547654 HABP4Q5JVS0 413 aaKnown RBP5.89□□□□□ -1.47
SCAF11-210ENST00000547654 YOD1Q5VVQ6 348 aaPredicted RBP5.89□□□□□ -1.47
SCAF11-210ENST00000547654 PKN3Q6P5Z2 889 aa5.89□□□□□ -1.47
SCAF11-210ENST00000547654 SPATC1Q76KD6 591 aa5.89□□□□□ -1.47
SCAF11-210ENST00000547654 MBD6Q96DN6 1003 aa5.89□□□□□ -1.47
SCAF11-210ENST00000547654 TMEM169Q96HH4 297 aa5.89□□□□□ -1.47
SCAF11-210ENST00000547654 SRPK1Q96SB4 655 aaKnown RBP5.89□□□□□ -1.47
SCAF11-210ENST00000547654 TMEM209Q96SK2 561 aa5.89□□□□□ -1.47
SCAF11-210ENST00000547654 SLITRK6Q9H5Y7 841 aa5.89□□□□□ -1.47
SCAF11-210ENST00000547654 DTLQ9NZJ0 730 aa5.89□□□□□ -1.47
SCAF11-210ENST00000547654 NOP58Q9Y2X3 529 aaKnown RBP5.89□□□□□ -1.47
SCAF11-210ENST00000547654 HGSO14964 777 aaPredicted RBP5.88□□□□□ -1.47
SCAF11-210ENST00000547654 MUSKO15146 869 aa5.88□□□□□ -1.47
SCAF11-210ENST00000547654 MEFVO15553 781 aaPredicted RBP5.88□□□□□ -1.47
SCAF11-210ENST00000547654 AMHP03971 560 aa5.88□□□□□ -1.47
SCAF11-210ENST00000547654 RASA3Q14644 834 aa5.88□□□□□ -1.47
SCAF11-210ENST00000547654 FOXB2Q5VYV0 432 aa5.88□□□□□ -1.47
SCAF11-210ENST00000547654 TRMT10BQ6PF06 316 aaKnown RBP5.88□□□□□ -1.47
SCAF11-210ENST00000547654 PPIL6Q8IXY8 311 aa5.88□□□□□ -1.47
SCAF11-210ENST00000547654 JMYQ8N9B5 988 aa5.88□□□□□ -1.47
SCAF11-210ENST00000547654 DNERQ8NFT8 737 aa5.88□□□□□ -1.47
SCAF11-210ENST00000547654 MKL1Q969V6 931 aa5.88□□□□□ -1.47
SCAF11-210ENST00000547654 IER2Q9BTL4 223 aa5.88□□□□□ -1.47
SCAF11-210ENST00000547654 BRINP2Q9C0B6 783 aa5.88□□□□□ -1.47
SCAF11-210ENST00000547654 CCDC113Q9H0I3 377 aa5.88□□□□□ -1.47
SCAF11-210ENST00000547654 SLKQ9H2G2 1235 aaPredicted RBP5.88□□□□□ -1.47
SCAF11-210ENST00000547654 BARX1Q9HBU1 254 aaPredicted RBP5.88□□□□□ -1.47
SCAF11-210ENST00000547654 SIRPGQ9P1W8 387 aa5.88□□□□□ -1.47
SCAF11-210ENST00000547654 R3HCC1Q9Y3T6 440 aaKnown RBP5.88□□□□□ -1.47
SCAF11-210ENST00000547654 ASXL2Q76L83 1435 aa5.88□□□□□ -1.47
SCAF11-210ENST00000547654 H7BY64 318 aa5.87□□□□□ -1.47
SCAF11-210ENST00000547654 ENPP3O14638 875 aa5.87□□□□□ -1.47
SCAF11-210ENST00000547654 C6orf222P0C671 652 aaPredicted RBP5.87□□□□□ -1.47
SCAF11-210ENST00000547654 RASGRF1Q13972 1273 aa5.87□□□□□ -1.47
SCAF11-210ENST00000547654 CRB2Q5IJ48 1285 aa5.87□□□□□ -1.47
SCAF11-210ENST00000547654 STEAP3Q658P3 488 aa5.87□□□□□ -1.47
SCAF11-210ENST00000547654 SLFN13Q68D06 897 aa5.87□□□□□ -1.47
SCAF11-210ENST00000547654 TEPPQ6URK8 271 aa5.87□□□□□ -1.47
SCAF11-210ENST00000547654 FILIP1Q7Z7B0 1213 aa5.87□□□□□ -1.47
SCAF11-210ENST00000547654 KLHL36Q8N4N3 616 aa5.87□□□□□ -1.47
SCAF11-210ENST00000547654 ZCCHC14Q8WYQ9 949 aaKnown RBP5.87□□□□□ -1.47
SCAF11-210ENST00000547654 CHAMP1Q96JM3 812 aa5.87□□□□□ -1.47
SCAF11-210ENST00000547654 GPR27Q9NS67 375 aa5.87□□□□□ -1.47
SCAF11-210ENST00000547654 HSPBP1Q9NZL4 362 aa5.87□□□□□ -1.47
SCAF11-210ENST00000547654 COL4A3BPQ9Y5P4 624 aa5.87□□□□□ -1.47
SCAF11-210ENST00000547654 PABPC1P11940 636 aaKnown RBP5.86□□□□□ -1.47
SCAF11-210ENST00000547654 MLLT6P55198 1093 aaPredicted RBP5.86□□□□□ -1.47
SCAF11-210ENST00000547654 TAF7LQ5H9L4 462 aa5.86□□□□□ -1.47
SCAF11-210ENST00000547654 SPDYAQ5MJ70 313 aa5.86□□□□□ -1.47
SCAF11-210ENST00000547654 RSPO2Q6UXX9 243 aaPredicted RBP5.86□□□□□ -1.47
SCAF11-210ENST00000547654 ARRDC4Q8NCT1 418 aa5.86□□□□□ -1.47
SCAF11-210ENST00000547654 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.86□□□□□ -1.47
SCAF11-210ENST00000547654 SEMA4AQ9H3S1 761 aa5.86□□□□□ -1.47
SCAF11-210ENST00000547654 KLHL42Q9P2K6 505 aa5.86□□□□□ -1.47
SCAF11-210ENST00000547654 PPARGC1AQ9UBK2 798 aaKnown RBP5.86□□□□□ -1.47
SCAF11-210ENST00000547654 TCRBV5S2A0A599 114 aa5.85□□□□□ -1.47
SCAF11-210ENST00000547654 FAM221BA6H8Z2 402 aa5.85□□□□□ -1.47
SCAF11-210ENST00000547654 PATE3B3GLJ2 98 aa5.85□□□□□ -1.47
SCAF11-210ENST00000547654 PPP1R12AO14974 1030 aaPredicted RBP5.85□□□□□ -1.47
SCAF11-210ENST00000547654 B4GALT4O60513 344 aa5.85□□□□□ -1.47
SCAF11-210ENST00000547654 DIAPH1O60610 1272 aaKnown RBP5.85□□□□□ -1.47
SCAF11-210ENST00000547654 DNAJC6O75061 913 aa5.85□□□□□ -1.47
SCAF11-210ENST00000547654 LSAMPQ13449 338 aa5.85□□□□□ -1.47
SCAF11-210ENST00000547654 TMC5Q6UXY8 1006 aa5.85□□□□□ -1.47
SCAF11-210ENST00000547654 PROSER1Q86XN7 944 aa5.85□□□□□ -1.47
SCAF11-210ENST00000547654 KCTD13Q8WZ19 329 aa5.85□□□□□ -1.47
SCAF11-210ENST00000547654 AARSD1Q9BTE6 412 aaKnown RBP5.85□□□□□ -1.47
SCAF11-210ENST00000547654 ZNF341Q9BYN7 854 aa5.85□□□□□ -1.47
SCAF11-210ENST00000547654 PCED1AQ9H1Q7 454 aa5.85□□□□□ -1.47
SCAF11-210ENST00000547654 LRP2BPQ9P2M1 347 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms