RNA–Protein interactions for RNA: ENST00000547614.5

CHMP1A-203, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 653 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-203ENST00000547614 GAS2L1Q99501 681 aaPredicted RBP21.31■■□□□ 1
CHMP1A-203ENST00000547614 TM6SF1Q9BZW5 370 aa21.31■■□□□ 1
CHMP1A-203ENST00000547614 ZMYND12Q9H0C1 365 aa21.31■■□□□ 1
CHMP1A-203ENST00000547614 SETD4Q9NVD3 440 aa21.31■■□□□ 1
CHMP1A-203ENST00000547614 A0A0C4DFX4 3053 aa21.31■■□□□ 1
CHMP1A-203ENST00000547614 EMSYQ7Z589 1322 aa21.3■■□□□ 1
CHMP1A-203ENST00000547614 NRCAMQ92823 1304 aa21.3■■□□□ 1
CHMP1A-203ENST00000547614 GBF1Q92538 1859 aa21.3■■□□□ 1
CHMP1A-203ENST00000547614 ABHD14A-ACY1A0A1B0GW23 586 aa21.3■■□□□ 1
CHMP1A-203ENST00000547614 RSPH10B2B2RC85 870 aa21.3■■□□□ 1
CHMP1A-203ENST00000547614 EFCAB14O75071 495 aa21.3■■□□□ 1
CHMP1A-203ENST00000547614 RSPH10BP0C881 870 aa21.3■■□□□ 1
CHMP1A-203ENST00000547614 THPOP40225 353 aa21.3■■□□□ 1
CHMP1A-203ENST00000547614 KCNJ6P48051 423 aa21.3■■□□□ 1
CHMP1A-203ENST00000547614 NTRK3Q16288 839 aa21.3■■□□□ 1
CHMP1A-203ENST00000547614 PKN1Q16512 942 aa21.3■■□□□ 1
CHMP1A-203ENST00000547614 PRDM12Q9H4Q4 367 aa21.3■■□□□ 1
CHMP1A-203ENST00000547614 CYP46A1Q9Y6A2 500 aa21.3■■□□□ 1
CHMP1A-203ENST00000547614 CHD9Q3L8U1 2897 aa21.3■■□□□ 1
CHMP1A-203ENST00000547614 NFASCO94856 1347 aa21.29■■□□□ 1
CHMP1A-203ENST00000547614 KIF28PB7ZC32 967 aa21.29■■□□□ 1
CHMP1A-203ENST00000547614 MEIS1O00470 390 aa21.29■■□□□ 1
CHMP1A-203ENST00000547614 MYOGP15173 224 aa21.29■■□□□ 1
CHMP1A-203ENST00000547614 IFNAR1P17181 557 aa21.29■■□□□ 1
CHMP1A-203ENST00000547614 PDIA3P30101 505 aaKnown RBP21.29■■□□□ 1
CHMP1A-203ENST00000547614 AKAP17AQ02040 695 aaKnown RBP21.29■■□□□ 1
CHMP1A-203ENST00000547614 MBTPS1Q14703 1052 aa21.29■■□□□ 1
CHMP1A-203ENST00000547614 PPP2R2DQ66LE6 453 aa21.29■■□□□ 1
CHMP1A-203ENST00000547614 NIPA1Q7RTP0 329 aa21.29■■□□□ 1
CHMP1A-203ENST00000547614 HERC6Q8IVU3 1022 aa21.29■■□□□ 1
CHMP1A-203ENST00000547614 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.29■■□□□ 1
CHMP1A-203ENST00000547614 CYP2W1Q8TAV3 490 aa21.29■■□□□ 1
CHMP1A-203ENST00000547614 PGBD1Q96JS3 809 aa21.29■■□□□ 1
CHMP1A-203ENST00000547614 RNF26Q9BY78 433 aaPredicted RBP21.29■■□□□ 1
CHMP1A-203ENST00000547614 SMARCAD1Q9H4L7 1026 aa21.29■■□□□ 1
CHMP1A-203ENST00000547614 C6orf50Q9HD87 102 aa21.29■■□□□ 1
CHMP1A-203ENST00000547614 JPH1Q9HDC5 661 aaPredicted RBP21.29■■□□□ 1
CHMP1A-203ENST00000547614 TMEM260Q9NX78 707 aa21.29■■□□□ 1
CHMP1A-203ENST00000547614 ERAP1Q9NZ08 941 aa21.29■■□□□ 1
CHMP1A-203ENST00000547614 GNA11P29992 359 aa21.28■■□□□ 1
CHMP1A-203ENST00000547614 WDR5P61964 334 aaKnown RBP21.28■■□□□ 1
CHMP1A-203ENST00000547614 IKBKEQ14164 716 aa21.28■■□□□ 1
CHMP1A-203ENST00000547614 LMBR1Q8WVP7 490 aa21.28■■□□□ 1
CHMP1A-203ENST00000547614 SDF4Q9BRK5 362 aa21.28■■□□□ 1
CHMP1A-203ENST00000547614 PKD2L1Q9P0L9 805 aa21.28■■□□□ 1
CHMP1A-203ENST00000547614 SLC9A2Q9UBY0 812 aa21.28■■□□□ 1
CHMP1A-203ENST00000547614 LGR5O75473 907 aa21.27■■□□□ 1
CHMP1A-203ENST00000547614 CYP3A4P08684 503 aa21.27■■□□□ 1
CHMP1A-203ENST00000547614 ARP10275 920 aa21.27■■□□□ 1
CHMP1A-203ENST00000547614 ARHGAP4P98171 946 aa21.27■■□□□ 1
CHMP1A-203ENST00000547614 TOB2Q14106 344 aaPredicted RBP21.27■■□□□ 1
CHMP1A-203ENST00000547614 CRYGNQ8WXF5 182 aa21.27■■□□□ 1
CHMP1A-203ENST00000547614 GLG1Q92896 1179 aa21.27■■□□□ 1
CHMP1A-203ENST00000547614 PHKBQ93100 1093 aa21.27■■□□□ 1
CHMP1A-203ENST00000547614 EYSQ5T1H1 3165 aa21.26■□□□□ 0.99
CHMP1A-203ENST00000547614 KAT6AQ92794 2004 aa21.26■□□□□ 0.99
CHMP1A-203ENST00000547614 CA3P07451 260 aa21.26■□□□□ 0.99
CHMP1A-203ENST00000547614 ZNF76P36508 570 aa21.26■□□□□ 0.99
CHMP1A-203ENST00000547614 JAKMIP3Q5VZ66 844 aa21.26■□□□□ 0.99
CHMP1A-203ENST00000547614 RPAINQ86UA6 219 aa21.26■□□□□ 0.99
CHMP1A-203ENST00000547614 REXO1Q8N1G1 1221 aaKnown RBP21.26■□□□□ 0.99
CHMP1A-203ENST00000547614 TNPO1Q92973 898 aaKnown RBP21.26■□□□□ 0.99
CHMP1A-203ENST00000547614 ZNF274Q96GC6 653 aaPredicted RBP21.26■□□□□ 0.99
CHMP1A-203ENST00000547614 AGO4Q9HCK5 861 aaKnown RBP21.26■□□□□ 0.99
CHMP1A-203ENST00000547614 CCT2P78371 535 aaKnown RBP21.25■□□□□ 0.99
CHMP1A-203ENST00000547614 PLEKHG4Q58EX7 1191 aa21.25■□□□□ 0.99
CHMP1A-203ENST00000547614 FAM26DQ5JW98 314 aa21.25■□□□□ 0.99
CHMP1A-203ENST00000547614 TAF2Q6P1X5 1199 aa21.25■□□□□ 0.99
CHMP1A-203ENST00000547614 CCDC148Q8NFR7 591 aa21.25■□□□□ 0.99
CHMP1A-203ENST00000547614 DBF4BQ8NFT6 615 aa21.25■□□□□ 0.99
CHMP1A-203ENST00000547614 BICD2Q8TD16 824 aa21.25■□□□□ 0.99
CHMP1A-203ENST00000547614 SLC26A6Q9BXS9 759 aa21.25■□□□□ 0.99
CHMP1A-203ENST00000547614 AZI2Q9H6S1 392 aa21.25■□□□□ 0.99
CHMP1A-203ENST00000547614 UNC80Q8N2C7 3258 aa21.25■□□□□ 0.99
CHMP1A-203ENST00000547614 DLL1O00548 723 aa21.24■□□□□ 0.99
CHMP1A-203ENST00000547614 TLL1O43897 1013 aa21.24■□□□□ 0.99
CHMP1A-203ENST00000547614 ATG7O95352 703 aa21.24■□□□□ 0.99
CHMP1A-203ENST00000547614 ACTR2P61160 394 aa21.24■□□□□ 0.99
CHMP1A-203ENST00000547614 PPFIA1Q13136 1202 aa21.24■□□□□ 0.99
CHMP1A-203ENST00000547614 ITGB3BPQ13352 177 aaPredicted RBP21.24■□□□□ 0.99
CHMP1A-203ENST00000547614 ADGRE1Q14246 886 aa21.24■□□□□ 0.99
CHMP1A-203ENST00000547614 TCTN1Q2MV58 587 aa21.24■□□□□ 0.99
CHMP1A-203ENST00000547614 PLPPR4Q7Z2D5 763 aa21.24■□□□□ 0.99
CHMP1A-203ENST00000547614 PCYT2Q99447 389 aa21.24■□□□□ 0.99
CHMP1A-203ENST00000547614 NCOA5Q9HCD5 579 aaKnown RBP21.24■□□□□ 0.99
CHMP1A-203ENST00000547614 SH3GLB2Q9NR46 395 aa21.24■□□□□ 0.99
CHMP1A-203ENST00000547614 CHD7Q9P2D1 2997 aa21.23■□□□□ 0.99
CHMP1A-203ENST00000547614 MBLAC1A4D2B0 266 aaPredicted RBP21.23■□□□□ 0.99
CHMP1A-203ENST00000547614 RRN3P2A6NIE6 340 aa21.23■□□□□ 0.99
CHMP1A-203ENST00000547614 FAM86B1E9PN63 330 aa21.23■□□□□ 0.99
CHMP1A-203ENST00000547614 FAM86B2P0C5J1 330 aa21.23■□□□□ 0.99
CHMP1A-203ENST00000547614 MARK3P27448 753 aa21.23■□□□□ 0.99
CHMP1A-203ENST00000547614 DEFB103AP81534 67 aa21.23■□□□□ 0.99
CHMP1A-203ENST00000547614 GRIK4Q16099 956 aa21.23■□□□□ 0.99
CHMP1A-203ENST00000547614 PLA2G4DQ86XP0 818 aa21.23■□□□□ 0.99
CHMP1A-203ENST00000547614 TRIM22Q8IYM9 498 aa21.23■□□□□ 0.99
CHMP1A-203ENST00000547614 ZBED2Q9BTP6 218 aa21.23■□□□□ 0.99
CHMP1A-203ENST00000547614 UPF3BQ9BZI7 483 aaKnown RBP21.23■□□□□ 0.99
CHMP1A-203ENST00000547614 PRUNE2Q8WUY3 3088 aa21.23■□□□□ 0.99
CHMP1A-203ENST00000547614 IGLV3-22A0A075B6J6 115 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms