RNA–Protein interactions for RNA: ENST00000547208.5

BEST3-208, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 1,187 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-208ENST00000547208 USP26Q9BXU7 913 aa11.82□□□□□ -0.52
BEST3-208ENST00000547208 NKX2-4Q9H2Z4 354 aa11.82□□□□□ -0.52
BEST3-208ENST00000547208 JADE2Q9NQC1 790 aa11.82□□□□□ -0.52
BEST3-208ENST00000547208 GSTTP1A0A1W2PQM5 241 aa11.81□□□□□ -0.52
BEST3-208ENST00000547208 BAIAP3O94812 1187 aa11.81□□□□□ -0.52
BEST3-208ENST00000547208 ACTN1P12814 892 aa11.81□□□□□ -0.52
BEST3-208ENST00000547208 METAP2P50579 478 aaKnown RBP eCLIP11.81□□□□□ -0.52
BEST3-208ENST00000547208 ADCY7P51828 1080 aa11.81□□□□□ -0.52
BEST3-208ENST00000547208 MTMR1Q13613 665 aa11.81□□□□□ -0.52
BEST3-208ENST00000547208 NTRK3Q16288 839 aa11.81□□□□□ -0.52
BEST3-208ENST00000547208 PKN1Q16512 942 aa11.81□□□□□ -0.52
BEST3-208ENST00000547208 PFKFB3Q16875 520 aaPredicted RBP11.81□□□□□ -0.52
BEST3-208ENST00000547208 ZNF618Q5T7W0 954 aa11.81□□□□□ -0.52
BEST3-208ENST00000547208 GIMAP8Q8ND71 665 aaPredicted RBP11.81□□□□□ -0.52
BEST3-208ENST00000547208 CYP2W1Q8TAV3 490 aa11.81□□□□□ -0.52
BEST3-208ENST00000547208 CDHR1Q96JP9 859 aa11.81□□□□□ -0.52
BEST3-208ENST00000547208 PGBD1Q96JS3 809 aa11.81□□□□□ -0.52
BEST3-208ENST00000547208 NECAB3Q96P71 396 aaPredicted RBP11.81□□□□□ -0.52
BEST3-208ENST00000547208 SLC9A7Q96T83 725 aa11.81□□□□□ -0.52
BEST3-208ENST00000547208 RNPEPQ9H4A4 650 aa11.81□□□□□ -0.52
BEST3-208ENST00000547208 TMEM260Q9NX78 707 aa11.81□□□□□ -0.52
BEST3-208ENST00000547208 MSRAQ9UJ68 235 aa11.81□□□□□ -0.52
BEST3-208ENST00000547208 PCDHA11Q9Y5I1 949 aa11.81□□□□□ -0.52
BEST3-208ENST00000547208 EVPLQ92817 2033 aa11.81□□□□□ -0.52
BEST3-208ENST00000547208 C17orf102A2RUQ5 167 aa11.8□□□□□ -0.52
BEST3-208ENST00000547208 SMCO2A6NFE2 343 aa11.8□□□□□ -0.52
BEST3-208ENST00000547208 TREHO43280 583 aa11.8□□□□□ -0.52
BEST3-208ENST00000547208 PARNO95453 639 aaKnown RBP11.8□□□□□ -0.52
BEST3-208ENST00000547208 SCG2P13521 617 aa11.8□□□□□ -0.52
BEST3-208ENST00000547208 TCF7P36402 384 aaPredicted RBP11.8□□□□□ -0.52
BEST3-208ENST00000547208 SREBF1P36956 1147 aa11.8□□□□□ -0.52
BEST3-208ENST00000547208 FGD1P98174 961 aa11.8□□□□□ -0.52
BEST3-208ENST00000547208 SP4Q02446 784 aa11.8□□□□□ -0.52
BEST3-208ENST00000547208 TOB2Q14106 344 aaPredicted RBP11.8□□□□□ -0.52
BEST3-208ENST00000547208 PHOSPHO2Q8TCD6 241 aa11.8□□□□□ -0.52
BEST3-208ENST00000547208 CRYGNQ8WXF5 182 aa11.8□□□□□ -0.52
BEST3-208ENST00000547208 ATP6V0A1Q93050 837 aa11.8□□□□□ -0.52
BEST3-208ENST00000547208 MXRA8Q9BRK3 442 aa11.8□□□□□ -0.52
BEST3-208ENST00000547208 ANO3Q9BYT9 981 aa11.8□□□□□ -0.52
BEST3-208ENST00000547208 FTOQ9C0B1 505 aaKnown RBP eCLIP11.8□□□□□ -0.52
BEST3-208ENST00000547208 PRDM12Q9H4Q4 367 aa11.8□□□□□ -0.52
BEST3-208ENST00000547208 ZSWIM6Q9HCJ5 1215 aa11.8□□□□□ -0.52
BEST3-208ENST00000547208 SETD4Q9NVD3 440 aa11.8□□□□□ -0.52
BEST3-208ENST00000547208 ATG2AQ2TAZ0 1938 aa11.8□□□□□ -0.52
BEST3-208ENST00000547208 NCOR1O75376 2440 aa11.79□□□□□ -0.52
BEST3-208ENST00000547208 RALGAPA2Q2PPJ7 1873 aa11.79□□□□□ -0.52
BEST3-208ENST00000547208 CCDC196A0A1B0GTZ2 297 aa11.79□□□□□ -0.52
BEST3-208ENST00000547208 ESYT2A0FGR8 921 aa11.79□□□□□ -0.52
BEST3-208ENST00000547208 MAFGO15525 162 aa11.79□□□□□ -0.52
BEST3-208ENST00000547208 PRPF3O43395 683 aaKnown RBP11.79□□□□□ -0.52
BEST3-208ENST00000547208 ARHGEF15O94989 841 aa11.79□□□□□ -0.52
BEST3-208ENST00000547208 FOSP01100 380 aaPredicted RBP11.79□□□□□ -0.52
BEST3-208ENST00000547208 NEFLP07196 543 aa11.79□□□□□ -0.52
BEST3-208ENST00000547208 ARP10275 920 aa11.79□□□□□ -0.52
BEST3-208ENST00000547208 PSMA5P28066 241 aa11.79□□□□□ -0.52
BEST3-208ENST00000547208 THPOP40225 353 aa11.79□□□□□ -0.52
BEST3-208ENST00000547208 WDR5P61964 334 aaKnown RBP11.79□□□□□ -0.52
BEST3-208ENST00000547208 AP3B2Q13367 1082 aa11.79□□□□□ -0.52
BEST3-208ENST00000547208 ADGRE1Q14246 886 aa11.79□□□□□ -0.52
BEST3-208ENST00000547208 UTP14CQ5TAP6 766 aaKnown RBP11.79□□□□□ -0.52
BEST3-208ENST00000547208 CNKSR3Q6P9H4 555 aa11.79□□□□□ -0.52
BEST3-208ENST00000547208 RUFY3Q7L099 469 aa11.79□□□□□ -0.52
BEST3-208ENST00000547208 HERC6Q8IVU3 1022 aa11.79□□□□□ -0.52
BEST3-208ENST00000547208 LMBR1Q8WVP7 490 aa11.79□□□□□ -0.52
BEST3-208ENST00000547208 PHKBQ93100 1093 aa11.79□□□□□ -0.52
BEST3-208ENST00000547208 PCYT2Q99447 389 aa11.79□□□□□ -0.52
BEST3-208ENST00000547208 OSBPL7Q9BZF2 842 aa11.79□□□□□ -0.52
BEST3-208ENST00000547208 ZMYND12Q9H0C1 365 aa11.79□□□□□ -0.52
BEST3-208ENST00000547208 SLC28A3Q9HAS3 691 aa11.79□□□□□ -0.52
BEST3-208ENST00000547208 KCNH7Q9NS40 1196 aa11.79□□□□□ -0.52
BEST3-208ENST00000547208 PPP4R2Q9NY27 417 aa11.79□□□□□ -0.52
BEST3-208ENST00000547208 PKD2L1Q9P0L9 805 aa11.79□□□□□ -0.52
BEST3-208ENST00000547208 ZNF215Q9UL58 517 aaPredicted RBP11.79□□□□□ -0.52
BEST3-208ENST00000547208 NAP1L2Q9ULW6 460 aaPredicted RBP11.79□□□□□ -0.52
BEST3-208ENST00000547208 EMSYQ7Z589 1322 aa11.79□□□□□ -0.52
BEST3-208ENST00000547208 MEIS1O00470 390 aa11.78□□□□□ -0.52
BEST3-208ENST00000547208 CA3P07451 260 aa11.78□□□□□ -0.52
BEST3-208ENST00000547208 PDIA3P30101 505 aaKnown RBP11.78□□□□□ -0.52
BEST3-208ENST00000547208 DEFB103AP81534 67 aa11.78□□□□□ -0.52
BEST3-208ENST00000547208 ITGB3BPQ13352 177 aaPredicted RBP11.78□□□□□ -0.52
BEST3-208ENST00000547208 CCDC85BQ15834 202 aaPredicted RBP11.78□□□□□ -0.52
BEST3-208ENST00000547208 CEP55Q53EZ4 464 aa11.78□□□□□ -0.52
BEST3-208ENST00000547208 PPP2R2DQ66LE6 453 aa11.78□□□□□ -0.52
BEST3-208ENST00000547208 TMCO2Q7Z6W1 182 aaPredicted RBP11.78□□□□□ -0.52
BEST3-208ENST00000547208 SEPT1Q8WYJ6 367 aa11.78□□□□□ -0.52
BEST3-208ENST00000547208 GLT8D2Q9H1C3 349 aa11.78□□□□□ -0.52
BEST3-208ENST00000547208 EHMT1Q9H9B1 1298 aa11.78□□□□□ -0.52
BEST3-208ENST00000547208 NCOA5Q9HCD5 579 aaKnown RBP11.78□□□□□ -0.52
BEST3-208ENST00000547208 AGO4Q9HCK5 861 aaKnown RBP11.78□□□□□ -0.52
BEST3-208ENST00000547208 NFASCO94856 1347 aa11.78□□□□□ -0.52
BEST3-208ENST00000547208 KIAA1671Q9BY89 1806 aa11.77□□□□□ -0.52
BEST3-208ENST00000547208 IGLV3-22A0A075B6J6 115 aa11.77□□□□□ -0.53
BEST3-208ENST00000547208 ABHD14A-ACY1A0A1B0GW23 586 aa11.77□□□□□ -0.53
BEST3-208ENST00000547208 RSPH10B2B2RC85 870 aa11.77□□□□□ -0.53
BEST3-208ENST00000547208 FAM86B1E9PN63 330 aa11.77□□□□□ -0.53
BEST3-208ENST00000547208 PPFIA3O75145 1194 aa11.77□□□□□ -0.53
BEST3-208ENST00000547208 CAND2O75155 1236 aa11.77□□□□□ -0.53
BEST3-208ENST00000547208 LGR5O75473 907 aa11.77□□□□□ -0.53
BEST3-208ENST00000547208 FAM86B2P0C5J1 330 aa11.77□□□□□ -0.53
BEST3-208ENST00000547208 RSPH10BP0C881 870 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms