RNA–Protein interactions for RNA: ENST00000547068.5

NPAS3-205, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-205ENST00000547068 KRT71Q3SY84 523 aa11.73□□□□□ -0.53
NPAS3-205ENST00000547068 VWA3BQ502W6 1294 aa11.73□□□□□ -0.53
NPAS3-205ENST00000547068 ERMARDQ5T6L9 678 aa11.73□□□□□ -0.53
NPAS3-205ENST00000547068 MEI1Q5TIA1 1274 aa11.73□□□□□ -0.53
NPAS3-205ENST00000547068 MIS18BP1Q6P0N0 1132 aa11.73□□□□□ -0.53
NPAS3-205ENST00000547068 NBPF5PQ86XG9 351 aaPredicted RBP11.73□□□□□ -0.53
NPAS3-205ENST00000547068 PARD3BQ8TEW8 1205 aa11.73□□□□□ -0.53
NPAS3-205ENST00000547068 AGAP11Q8TF27 550 aa11.73□□□□□ -0.53
NPAS3-205ENST00000547068 XPO6Q96QU8 1125 aaKnown RBP11.73□□□□□ -0.53
NPAS3-205ENST00000547068 PSMD1Q99460 953 aa11.73□□□□□ -0.53
NPAS3-205ENST00000547068 NDST4Q9H3R1 872 aa11.73□□□□□ -0.53
NPAS3-205ENST00000547068 CNOT10Q9H9A5 744 aaKnown RBP11.73□□□□□ -0.53
NPAS3-205ENST00000547068 ETAA1Q9NY74 926 aa11.73□□□□□ -0.53
NPAS3-205ENST00000547068 TIAM2Q8IVF5 1701 aa11.72□□□□□ -0.53
NPAS3-205ENST00000547068 SMNDC1O75940 238 aaKnown RBP eCLIP11.72□□□□□ -0.53
NPAS3-205ENST00000547068 PHKA1P46020 1223 aa11.72□□□□□ -0.53
NPAS3-205ENST00000547068 NFIXQ14938 502 aa11.72□□□□□ -0.53
NPAS3-205ENST00000547068 SEC23AQ15436 765 aa11.72□□□□□ -0.53
NPAS3-205ENST00000547068 CACNA2D4Q7Z3S7 1137 aa11.72□□□□□ -0.53
NPAS3-205ENST00000547068 CCDC84Q86UT8 332 aaPredicted RBP11.72□□□□□ -0.53
NPAS3-205ENST00000547068 MDM1Q8TC05 714 aa11.72□□□□□ -0.53
NPAS3-205ENST00000547068 ZBTB10Q96DT7 871 aa11.72□□□□□ -0.53
NPAS3-205ENST00000547068 L3MBTL3Q96JM7 780 aaPredicted RBP11.72□□□□□ -0.53
NPAS3-205ENST00000547068 ZNF570Q96NI8 536 aa11.72□□□□□ -0.53
NPAS3-205ENST00000547068 KBTBD4Q9NVX7 518 aa11.72□□□□□ -0.53
NPAS3-205ENST00000547068 RIC1Q4ADV7 1423 aa11.72□□□□□ -0.53
NPAS3-205ENST00000547068 SSU72P8A0A1W2PR75 194 aa11.71□□□□□ -0.53
NPAS3-205ENST00000547068 PP2D1A8MPX8 630 aa11.71□□□□□ -0.53
NPAS3-205ENST00000547068 IRS4O14654 1257 aaPredicted RBP11.71□□□□□ -0.53
NPAS3-205ENST00000547068 DIAPH2O60879 1101 aa11.71□□□□□ -0.53
NPAS3-205ENST00000547068 UBA7P41226 1012 aa11.71□□□□□ -0.53
NPAS3-205ENST00000547068 MAP3K12Q12852 859 aa11.71□□□□□ -0.53
NPAS3-205ENST00000547068 SF3A3Q12874 501 aaKnown RBP eCLIP11.71□□□□□ -0.53
NPAS3-205ENST00000547068 STK4Q13043 487 aa11.71□□□□□ -0.53
NPAS3-205ENST00000547068 CCDC178Q5BJE1 867 aa11.71□□□□□ -0.53
NPAS3-205ENST00000547068 FAM133BQ5BKY9 247 aaKnown RBP11.71□□□□□ -0.53
NPAS3-205ENST00000547068 CATIPQ7Z7H3 387 aa11.71□□□□□ -0.53
NPAS3-205ENST00000547068 SPDYE1Q8NFV5 336 aaPredicted RBP11.71□□□□□ -0.53
NPAS3-205ENST00000547068 CCDC26Q8TAB7 109 aa11.71□□□□□ -0.53
NPAS3-205ENST00000547068 TAF4BQ92750 862 aa11.71□□□□□ -0.53
NPAS3-205ENST00000547068 FAM129AQ9BZQ8 928 aa11.71□□□□□ -0.53
NPAS3-205ENST00000547068 NEUROG2Q9H2A3 272 aa11.71□□□□□ -0.53
NPAS3-205ENST00000547068 LUC7LQ9NQ29 371 aaKnown RBP11.71□□□□□ -0.53
NPAS3-205ENST00000547068 PANK4Q9NVE7 773 aa11.71□□□□□ -0.53
NPAS3-205ENST00000547068 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.71□□□□□ -0.53
NPAS3-205ENST00000547068 MYH7BA7E2Y1 1941 aa11.71□□□□□ -0.53
NPAS3-205ENST00000547068 RWDD2BP57060 319 aa11.71□□□□□ -0.53
NPAS3-205ENST00000547068 ZNF268Q14587 947 aaPredicted RBP11.71□□□□□ -0.53
NPAS3-205ENST00000547068 ITIH4Q14624 930 aa11.71□□□□□ -0.53
NPAS3-205ENST00000547068 RBBP5Q15291 538 aaKnown RBP11.71□□□□□ -0.53
NPAS3-205ENST00000547068 NAB2Q15742 525 aa11.71□□□□□ -0.53
NPAS3-205ENST00000547068 DTHD1Q6ZMT9 781 aa11.71□□□□□ -0.53
NPAS3-205ENST00000547068 STAG2Q8N3U4 1231 aa11.71□□□□□ -0.53
NPAS3-205ENST00000547068 SLC16A10Q8TF71 515 aa11.71□□□□□ -0.53
NPAS3-205ENST00000547068 BAP1Q92560 729 aa11.71□□□□□ -0.53
NPAS3-205ENST00000547068 ESR2Q92731 530 aa11.71□□□□□ -0.53
NPAS3-205ENST00000547068 CNNM1Q9NRU3 951 aa11.71□□□□□ -0.53
NPAS3-205ENST00000547068 TMEM59LQ9UK28 342 aa11.71□□□□□ -0.53
NPAS3-205ENST00000547068 CORO1CQ9ULV4 474 aaPredicted RBP11.71□□□□□ -0.53
NPAS3-205ENST00000547068 NTSR2O95665 410 aa11.7□□□□□ -0.54
NPAS3-205ENST00000547068 UQCRFS1P1P0C7P4 283 aa11.7□□□□□ -0.54
NPAS3-205ENST00000547068 KLRC1P26715 233 aa11.7□□□□□ -0.54
NPAS3-205ENST00000547068 ARID4AP29374 1257 aaPredicted RBP11.7□□□□□ -0.54
NPAS3-205ENST00000547068 TM4SF1P30408 202 aa11.7□□□□□ -0.54
NPAS3-205ENST00000547068 FLT3P36888 993 aa11.7□□□□□ -0.54
NPAS3-205ENST00000547068 IFIT1BQ5T764 474 aaKnown RBP11.7□□□□□ -0.54
NPAS3-205ENST00000547068 PDXDC1Q6P996 788 aa11.7□□□□□ -0.54
NPAS3-205ENST00000547068 LCORLQ8N3X6 602 aa11.7□□□□□ -0.54
NPAS3-205ENST00000547068 C4orf32Q8N8J7 132 aa11.7□□□□□ -0.54
NPAS3-205ENST00000547068 TTLL11Q8NHH1 800 aa11.7□□□□□ -0.54
NPAS3-205ENST00000547068 CENPTQ96BT3 561 aa11.7□□□□□ -0.54
NPAS3-205ENST00000547068 QSER1Q2KHR3 1735 aa11.7□□□□□ -0.54
NPAS3-205ENST00000547068 RBAK-RBAKDNI3L0D1 243 aa11.7□□□□□ -0.54
NPAS3-205ENST00000547068 KCNK3O14649 394 aa11.7□□□□□ -0.54
NPAS3-205ENST00000547068 ASAP2O43150 1006 aa11.7□□□□□ -0.54
NPAS3-205ENST00000547068 PDE8AO60658 829 aa11.7□□□□□ -0.54
NPAS3-205ENST00000547068 AP1G2O75843 785 aa11.7□□□□□ -0.54
NPAS3-205ENST00000547068 SNUPNO95149 360 aaKnown RBP11.7□□□□□ -0.54
NPAS3-205ENST00000547068 FCER1AP12319 257 aa11.7□□□□□ -0.54
NPAS3-205ENST00000547068 GNAT2P19087 354 aa11.7□□□□□ -0.54
NPAS3-205ENST00000547068 PPP1R2P41236 205 aa11.7□□□□□ -0.54
NPAS3-205ENST00000547068 SLC9C1Q4G0N8 1177 aa11.7□□□□□ -0.54
NPAS3-205ENST00000547068 HGSNATQ68CP4 663 aa11.7□□□□□ -0.54
NPAS3-205ENST00000547068 ENAHQ8N8S7 591 aaPredicted RBP11.7□□□□□ -0.54
NPAS3-205ENST00000547068 ZNF317Q96PQ6 595 aaPredicted RBP11.7□□□□□ -0.54
NPAS3-205ENST00000547068 YIPF3Q9GZM5 350 aa11.7□□□□□ -0.54
NPAS3-205ENST00000547068 SAMD15Q9P1V8 674 aa11.7□□□□□ -0.54
NPAS3-205ENST00000547068 PCDHGC5Q9Y5F6 944 aa11.7□□□□□ -0.54
NPAS3-205ENST00000547068 MINDY4BA8MYZ0 360 aa11.69□□□□□ -0.54
NPAS3-205ENST00000547068 IRF6O14896 467 aa11.69□□□□□ -0.54
NPAS3-205ENST00000547068 SART1O43290 800 aaKnown RBP11.69□□□□□ -0.54
NPAS3-205ENST00000547068 SERPINB2P05120 415 aa11.69□□□□□ -0.54
NPAS3-205ENST00000547068 CSF1RP07333 972 aa11.69□□□□□ -0.54
NPAS3-205ENST00000547068 PDE6BP35913 854 aa11.69□□□□□ -0.54
NPAS3-205ENST00000547068 MAN2A1Q16706 1144 aa11.69□□□□□ -0.54
NPAS3-205ENST00000547068 TRPM8Q7Z2W7 1104 aa11.69□□□□□ -0.54
NPAS3-205ENST00000547068 PIGWQ7Z7B1 504 aa11.69□□□□□ -0.54
NPAS3-205ENST00000547068 SYNE4Q8N205 404 aa11.69□□□□□ -0.54
NPAS3-205ENST00000547068 PROCA1Q8NCQ7 364 aaPredicted RBP11.69□□□□□ -0.54
NPAS3-205ENST00000547068 ZSCAN10Q96SZ4 725 aaPredicted RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms