RNA–Protein interactions for RNA: ENST00000546962.5

TMEM116-204, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 5

Gene TMEM116, Length 319 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-204ENST00000546962 MED23Q9ULK4 1368 aa3.78□□□□□ -1.8
TMEM116-204ENST00000546962 hCG_2014768A0A024R1R8 64 aa3.78□□□□□ -1.8
TMEM116-204ENST00000546962 CLRN2A0PK11 232 aa3.78□□□□□ -1.8
TMEM116-204ENST00000546962 IRS4O14654 1257 aaPredicted RBP3.78□□□□□ -1.8
TMEM116-204ENST00000546962 TERTO14746 1132 aaKnown RBP3.78□□□□□ -1.8
TMEM116-204ENST00000546962 TMPRSS2O15393 492 aa3.78□□□□□ -1.8
TMEM116-204ENST00000546962 DNAJC6O75061 913 aa3.78□□□□□ -1.8
TMEM116-204ENST00000546962 HMGCRP04035 888 aa3.78□□□□□ -1.8
TMEM116-204ENST00000546962 FAM153BP0C7A2 387 aa3.78□□□□□ -1.8
TMEM116-204ENST00000546962 BCRP11274 1271 aa3.78□□□□□ -1.8
TMEM116-204ENST00000546962 IBSPP21815 317 aaPredicted RBP3.78□□□□□ -1.8
TMEM116-204ENST00000546962 POLR2BP30876 1174 aaKnown RBP3.78□□□□□ -1.8
TMEM116-204ENST00000546962 PRKAR2BP31323 418 aa3.78□□□□□ -1.8
TMEM116-204ENST00000546962 EIF4A1P60842 406 aaKnown RBP3.78□□□□□ -1.8
TMEM116-204ENST00000546962 ETF1P62495 437 aaKnown RBP3.78□□□□□ -1.8
TMEM116-204ENST00000546962 ERVK-24P63145 666 aa3.78□□□□□ -1.8
TMEM116-204ENST00000546962 NCAPHQ15003 741 aa3.78□□□□□ -1.8
TMEM116-204ENST00000546962 SHHQ15465 462 aa3.78□□□□□ -1.8
TMEM116-204ENST00000546962 CFAP100Q494V2 611 aa3.78□□□□□ -1.8
TMEM116-204ENST00000546962 ZBTB37Q5TC79 503 aa3.78□□□□□ -1.8
TMEM116-204ENST00000546962 C16orf86Q6ZW13 317 aa3.78□□□□□ -1.8
TMEM116-204ENST00000546962 EEPD1Q7L9B9 569 aa3.78□□□□□ -1.8
TMEM116-204ENST00000546962 MAP4K3Q8IVH8 894 aa3.78□□□□□ -1.8
TMEM116-204ENST00000546962 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.78□□□□□ -1.8
TMEM116-204ENST00000546962 USP38Q8NB14 1042 aa3.78□□□□□ -1.8
TMEM116-204ENST00000546962 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.78□□□□□ -1.8
TMEM116-204ENST00000546962 UBASH3BQ8TF42 649 aa3.78□□□□□ -1.8
TMEM116-204ENST00000546962 PPM1EQ8WY54 764 aa3.78□□□□□ -1.8
TMEM116-204ENST00000546962 ZNF669Q96BR6 464 aaPredicted RBP3.78□□□□□ -1.8
TMEM116-204ENST00000546962 FAM89AQ96GI7 184 aa3.78□□□□□ -1.8
TMEM116-204ENST00000546962 PHACTR3Q96KR7 559 aa3.78□□□□□ -1.8
TMEM116-204ENST00000546962 PRMT6Q96LA8 375 aaPredicted RBP3.78□□□□□ -1.8
TMEM116-204ENST00000546962 CDC5LQ99459 802 aaKnown RBP3.78□□□□□ -1.8
TMEM116-204ENST00000546962 SPATA9Q9BWV2 254 aa3.78□□□□□ -1.8
TMEM116-204ENST00000546962 SLKQ9H2G2 1235 aaPredicted RBP3.78□□□□□ -1.8
TMEM116-204ENST00000546962 PCDH12Q9NPG4 1184 aa3.78□□□□□ -1.8
TMEM116-204ENST00000546962 DISC1Q9NRI5 854 aa3.78□□□□□ -1.8
TMEM116-204ENST00000546962 MIS18AQ9NYP9 233 aa3.78□□□□□ -1.8
TMEM116-204ENST00000546962 CRIM1Q9NZV1 1036 aa3.78□□□□□ -1.8
TMEM116-204ENST00000546962 ZNF214Q9UL59 606 aaPredicted RBP3.78□□□□□ -1.8
TMEM116-204ENST00000546962 NOP58Q9Y2X3 529 aaKnown RBP3.78□□□□□ -1.8
TMEM116-204ENST00000546962 PRKAB1Q9Y478 270 aa3.78□□□□□ -1.8
TMEM116-204ENST00000546962 COL4A3BPQ9Y5P4 624 aa3.78□□□□□ -1.8
TMEM116-204ENST00000546962 ZNF646O15015 1829 aaPredicted RBP3.78□□□□□ -1.8
TMEM116-204ENST00000546962 SSC5DA1L4H1 1573 aa3.77□□□□□ -1.81
TMEM116-204ENST00000546962 PIEZO1Q92508 2521 aa3.77□□□□□ -1.81
TMEM116-204ENST00000546962 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.77□□□□□ -1.81
TMEM116-204ENST00000546962 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.77□□□□□ -1.81
TMEM116-204ENST00000546962 SMIM22K7EJ46 135 aa3.77□□□□□ -1.81
TMEM116-204ENST00000546962 PPP1R12AO14974 1030 aaPredicted RBP3.77□□□□□ -1.81
TMEM116-204ENST00000546962 FANCGO15287 622 aa3.77□□□□□ -1.81
TMEM116-204ENST00000546962 SUSD5O60279 629 aa3.77□□□□□ -1.81
TMEM116-204ENST00000546962 ASMTLO95671 621 aa3.77□□□□□ -1.81
TMEM116-204ENST00000546962 NEFMP07197 916 aa3.77□□□□□ -1.81
TMEM116-204ENST00000546962 U2AF1L5P0DN76 240 aaPredicted RBP3.77□□□□□ -1.81
TMEM116-204ENST00000546962 SLURP2P0DP57 97 aa3.77□□□□□ -1.81
TMEM116-204ENST00000546962 COL6A1P12109 1028 aa3.77□□□□□ -1.81
TMEM116-204ENST00000546962 RAG1P15918 1043 aa3.77□□□□□ -1.81
TMEM116-204ENST00000546962 HOXB4P17483 251 aaPredicted RBP3.77□□□□□ -1.81
TMEM116-204ENST00000546962 EIF2S2P20042 333 aaKnown RBP3.77□□□□□ -1.81
TMEM116-204ENST00000546962 NTF4P34130 210 aa3.77□□□□□ -1.81
TMEM116-204ENST00000546962 MASP1P48740 699 aa3.77□□□□□ -1.81
TMEM116-204ENST00000546962 CCT4P50991 539 aaKnown RBP3.77□□□□□ -1.81
TMEM116-204ENST00000546962 HNRNPUQ00839 825 aaKnown RBP eCLIP3.77□□□□□ -1.81
TMEM116-204ENST00000546962 U2AF1Q01081 240 aaKnown RBP eCLIP3.77□□□□□ -1.811e-6■■□□□ 12.9
TMEM116-204ENST00000546962 SLC7A5Q01650 507 aa3.77□□□□□ -1.81
TMEM116-204ENST00000546962 ID3Q02535 119 aa3.77□□□□□ -1.81
TMEM116-204ENST00000546962 AIMP1Q12904 312 aaKnown RBP3.77□□□□□ -1.81
TMEM116-204ENST00000546962 TRIM28Q13263 835 aaKnown RBP3.77□□□□□ -1.81
TMEM116-204ENST00000546962 NKG7Q16617 165 aa3.77□□□□□ -1.81
TMEM116-204ENST00000546962 C21orf62-AS1Q17RA5 79 aa3.77□□□□□ -1.81
TMEM116-204ENST00000546962 LRRC26Q2I0M4 334 aa3.77□□□□□ -1.81
TMEM116-204ENST00000546962 GNPTABQ3T906 1256 aa3.77□□□□□ -1.81
TMEM116-204ENST00000546962 HP1BP3Q5SSJ5 553 aaPredicted RBP3.77□□□□□ -1.81
TMEM116-204ENST00000546962 DCAF15Q66K64 600 aa3.77□□□□□ -1.81
TMEM116-204ENST00000546962 SLC6A19Q695T7 634 aa3.77□□□□□ -1.81
TMEM116-204ENST00000546962 LYPD4Q6UWN0 246 aa3.77□□□□□ -1.81
TMEM116-204ENST00000546962 FASTKD5Q7L8L6 764 aaKnown RBP3.77□□□□□ -1.81
TMEM116-204ENST00000546962 TMEM192Q8IY95 271 aa3.77□□□□□ -1.81
TMEM116-204ENST00000546962 ZBTB38Q8NAP3 1195 aaPredicted RBP3.77□□□□□ -1.81
TMEM116-204ENST00000546962 FAM13CQ8NE31 585 aa3.77□□□□□ -1.81
TMEM116-204ENST00000546962 ZNF507Q8TCN5 953 aa3.77□□□□□ -1.81
TMEM116-204ENST00000546962 SMCR8Q8TEV9 937 aaPredicted RBP3.77□□□□□ -1.81
TMEM116-204ENST00000546962 TMEM87BQ96K49 555 aa3.77□□□□□ -1.81
TMEM116-204ENST00000546962 FANCD2OSQ96PS1 177 aa3.77□□□□□ -1.81
TMEM116-204ENST00000546962 WRNIP1Q96S55 665 aa3.77□□□□□ -1.81
TMEM116-204ENST00000546962 KIF2CQ99661 725 aa3.77□□□□□ -1.81
TMEM116-204ENST00000546962 THUMPD2Q9BTF0 503 aaKnown RBP3.77□□□□□ -1.81
TMEM116-204ENST00000546962 TMPRSS13Q9BYE2 586 aa3.77□□□□□ -1.81
TMEM116-204ENST00000546962 EPHX3Q9H6B9 360 aa3.77□□□□□ -1.81
TMEM116-204ENST00000546962 PHAXQ9H814 394 aaKnown RBP3.77□□□□□ -1.81
TMEM116-204ENST00000546962 FBRSQ9HAH7 460 aa3.77□□□□□ -1.81
TMEM116-204ENST00000546962 BSDC1Q9NW68 430 aaPredicted RBP3.77□□□□□ -1.81
TMEM116-204ENST00000546962 NUDCQ9Y266 331 aa3.77□□□□□ -1.81
TMEM116-204ENST00000546962 POLR2AP24928 1970 aaKnown RBP3.76□□□□□ -1.81
TMEM116-204ENST00000546962 PFASO15067 1338 aa3.76□□□□□ -1.81
TMEM116-204ENST00000546962 CACNA1AO00555 2505 aa3.76□□□□□ -1.81
TMEM116-204ENST00000546962 HTTP42858 3142 aa3.76□□□□□ -1.81
TMEM116-204ENST00000546962 MEGF11A6BM72 1044 aa3.76□□□□□ -1.81
TMEM116-204ENST00000546962 PRR33A8MZF0 331 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms