RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 FAM126BQ8IXS8 530 aa16.38■□□□□ 0.21
DDX54-203ENST00000546869 SMARCAD1Q9H4L7 1026 aa16.38■□□□□ 0.21
DDX54-203ENST00000546869 TUT1Q9H6E5 874 aaKnown RBP16.38■□□□□ 0.21
DDX54-203ENST00000546869 EMSYQ7Z589 1322 aa16.38■□□□□ 0.21
DDX54-203ENST00000546869 KIF28PB7ZC32 967 aa16.37■□□□□ 0.21
DDX54-203ENST00000546869 TLR3O15455 904 aaKnown RBP16.37■□□□□ 0.21
DDX54-203ENST00000546869 SLC37A4O43826 429 aa16.37■□□□□ 0.21
DDX54-203ENST00000546869 SORBS3O60504 671 aa16.37■□□□□ 0.21
DDX54-203ENST00000546869 SUPT20HL2P0C7V6 817 aa16.37■□□□□ 0.21
DDX54-203ENST00000546869 SFNP31947 248 aa16.37■□□□□ 0.21
DDX54-203ENST00000546869 SLC26A2P50443 739 aa16.37■□□□□ 0.21
DDX54-203ENST00000546869 MFSD10Q14728 455 aa16.37■□□□□ 0.21
DDX54-203ENST00000546869 SLFN12Q8IYM2 578 aa16.37■□□□□ 0.21
DDX54-203ENST00000546869 RDM1Q8NG50 284 aa16.37■□□□□ 0.21
DDX54-203ENST00000546869 AFAP1L1Q8TED9 768 aa16.37■□□□□ 0.21
DDX54-203ENST00000546869 HAS1Q92839 578 aa16.37■□□□□ 0.21
DDX54-203ENST00000546869 ZNF215Q9UL58 517 aaPredicted RBP16.37■□□□□ 0.21
DDX54-203ENST00000546869 ATP11BQ9Y2G3 1177 aa16.37■□□□□ 0.21
DDX54-203ENST00000546869 TELO2Q9Y4R8 837 aa16.37■□□□□ 0.21
DDX54-203ENST00000546869 PCDHA10Q9Y5I2 948 aa16.37■□□□□ 0.21
DDX54-203ENST00000546869 SCN10AQ9Y5Y9 1956 aa16.37■□□□□ 0.21
DDX54-203ENST00000546869 GAS7O60861 476 aa16.36■□□□□ 0.21
DDX54-203ENST00000546869 CLTBP09497 229 aa16.36■□□□□ 0.21
DDX54-203ENST00000546869 ZNF286BP0CG31 522 aa16.36■□□□□ 0.21
DDX54-203ENST00000546869 HOXC8P31273 242 aa16.36■□□□□ 0.21
DDX54-203ENST00000546869 FAAP100Q0VG06 881 aa16.36■□□□□ 0.21
DDX54-203ENST00000546869 KIAA0753Q2KHM9 967 aa16.36■□□□□ 0.21
DDX54-203ENST00000546869 LRCH2Q5VUJ6 765 aa16.36■□□□□ 0.21
DDX54-203ENST00000546869 MIS18BP1Q6P0N0 1132 aa16.36■□□□□ 0.21
DDX54-203ENST00000546869 PCYT2Q99447 389 aa16.36■□□□□ 0.21
DDX54-203ENST00000546869 TEKT3Q9BXF9 490 aa16.36■□□□□ 0.21
DDX54-203ENST00000546869 AZI2Q9H6S1 392 aa16.36■□□□□ 0.21
DDX54-203ENST00000546869 ERAP1Q9NZ08 941 aa16.36■□□□□ 0.21
DDX54-203ENST00000546869 TCEAL9Q9UHQ7 104 aa16.36■□□□□ 0.21
DDX54-203ENST00000546869 NOL7Q9UMY1 257 aaKnown RBP16.36■□□□□ 0.21
DDX54-203ENST00000546869 WDR64B1ANS9 1081 aa16.35■□□□□ 0.21
DDX54-203ENST00000546869 KIAA0355O15063 1070 aa16.35■□□□□ 0.21
DDX54-203ENST00000546869 BAG4O95429 457 aaKnown RBP16.35■□□□□ 0.21
DDX54-203ENST00000546869 STAT5BP51692 787 aa16.35■□□□□ 0.21
DDX54-203ENST00000546869 JAK3P52333 1124 aa16.35■□□□□ 0.21
DDX54-203ENST00000546869 SP4Q02446 784 aa16.35■□□□□ 0.21
DDX54-203ENST00000546869 PPP2R5CQ13362 524 aa16.35■□□□□ 0.21
DDX54-203ENST00000546869 RILPL1Q5EBL4 403 aa16.35■□□□□ 0.21
DDX54-203ENST00000546869 C7orf61Q8IZ16 206 aa16.35■□□□□ 0.21
DDX54-203ENST00000546869 C7orf31Q8N865 590 aa16.35■□□□□ 0.21
DDX54-203ENST00000546869 TNPO1Q92973 898 aaKnown RBP16.35■□□□□ 0.21
DDX54-203ENST00000546869 MTMR9Q96QG7 549 aa16.35■□□□□ 0.21
DDX54-203ENST00000546869 PDLIM7Q9NR12 457 aa16.35■□□□□ 0.21
DDX54-203ENST00000546869 GTF2IRD1Q9UHL9 959 aa16.35■□□□□ 0.21
DDX54-203ENST00000546869 PQBP1O60828 265 aaKnown RBP16.34■□□□□ 0.21
DDX54-203ENST00000546869 PSAPP07602 524 aa16.34■□□□□ 0.21
DDX54-203ENST00000546869 SYT1P21579 422 aa16.34■□□□□ 0.21
DDX54-203ENST00000546869 TOB1P50616 345 aaPredicted RBP16.34■□□□□ 0.21
DDX54-203ENST00000546869 UTP14CQ5TAP6 766 aaKnown RBP16.34■□□□□ 0.21
DDX54-203ENST00000546869 FAM160B1Q5W0V3 765 aa16.34■□□□□ 0.21
DDX54-203ENST00000546869 BRAPQ7Z569 592 aa16.34■□□□□ 0.21
DDX54-203ENST00000546869 POTEDQ86YR6 584 aa16.34■□□□□ 0.21
DDX54-203ENST00000546869 GLG1Q92896 1179 aa16.34■□□□□ 0.21
DDX54-203ENST00000546869 DISC1Q9NRI5 854 aa16.34■□□□□ 0.21
DDX54-203ENST00000546869 HDAC6Q9UBN7 1215 aa16.34■□□□□ 0.21
DDX54-203ENST00000546869 TBX21Q9UL17 535 aa16.34■□□□□ 0.21
DDX54-203ENST00000546869 MAFBQ9Y5Q3 323 aaPredicted RBP16.34■□□□□ 0.21
DDX54-203ENST00000546869 DDX39AO00148 427 aaKnown RBP16.33■□□□□ 0.2
DDX54-203ENST00000546869 WNT7AO00755 349 aa16.33■□□□□ 0.2
DDX54-203ENST00000546869 B4GALT4O60513 344 aa16.33■□□□□ 0.2
DDX54-203ENST00000546869 NEMFO60524 1076 aa16.33■□□□□ 0.2
DDX54-203ENST00000546869 TTC38Q5R3I4 469 aa16.33■□□□□ 0.2
DDX54-203ENST00000546869 MCTP1Q6DN14 999 aa16.33■□□□□ 0.2
DDX54-203ENST00000546869 UNC45AQ9H3U1 944 aa16.33■□□□□ 0.2
DDX54-203ENST00000546869 RNPEPQ9H4A4 650 aa16.33■□□□□ 0.2
DDX54-203ENST00000546869 ZNF302Q9NR11 478 aa16.33■□□□□ 0.2
DDX54-203ENST00000546869 TMEM39AQ9NV64 488 aa16.33■□□□□ 0.2
DDX54-203ENST00000546869 PRKAG2Q9UGJ0 569 aa16.33■□□□□ 0.2
DDX54-203ENST00000546869 VAV3Q9UKW4 847 aa16.33■□□□□ 0.2
DDX54-203ENST00000546869 NRCAMQ92823 1304 aa16.33■□□□□ 0.2
DDX54-203ENST00000546869 MKI67P46013 3256 aaKnown RBP16.33■□□□□ 0.2
DDX54-203ENST00000546869 TRIM43BA6NCK2 446 aa16.32■□□□□ 0.2
DDX54-203ENST00000546869 LAD1O00515 517 aa16.32■□□□□ 0.2
DDX54-203ENST00000546869 GNAT1P11488 350 aa16.32■□□□□ 0.2
DDX54-203ENST00000546869 ADAM17P78536 824 aa16.32■□□□□ 0.2
DDX54-203ENST00000546869 SPIRE1Q08AE8 756 aa16.32■□□□□ 0.2
DDX54-203ENST00000546869 CALCRLQ16602 461 aa16.32■□□□□ 0.2
DDX54-203ENST00000546869 SWSAP1Q6NVH7 229 aa16.32■□□□□ 0.2
DDX54-203ENST00000546869 TRIM50Q86XT4 487 aa16.32■□□□□ 0.2
DDX54-203ENST00000546869 CCDC60Q8IWA6 550 aaPredicted RBP16.32■□□□□ 0.2
DDX54-203ENST00000546869 C4orf32Q8N8J7 132 aa16.32■□□□□ 0.2
DDX54-203ENST00000546869 GJA10Q969M2 543 aa16.32■□□□□ 0.2
DDX54-203ENST00000546869 TRIM43Q96BQ3 446 aaPredicted RBP16.32■□□□□ 0.2
DDX54-203ENST00000546869 ALPK3Q96L96 1907 aa16.32■□□□□ 0.2
DDX54-203ENST00000546869 TRPV6Q9H1D0 765 aa16.32■□□□□ 0.2
DDX54-203ENST00000546869 PCDHA12Q9UN75 941 aa16.32■□□□□ 0.2
DDX54-203ENST00000546869 C17orf102A2RUQ5 167 aa16.31■□□□□ 0.2
DDX54-203ENST00000546869 RRN3P2A6NIE6 340 aa16.31■□□□□ 0.2
DDX54-203ENST00000546869 H0YGN5 161 aa16.31■□□□□ 0.2
DDX54-203ENST00000546869 STX6O43752 255 aa16.31■□□□□ 0.2
DDX54-203ENST00000546869 MARCH6O60337 910 aa16.31■□□□□ 0.2
DDX54-203ENST00000546869 HSP90AA1P07900 732 aaKnown RBP16.31■□□□□ 0.2
DDX54-203ENST00000546869 SMIM10L2AP0DMW4 78 aa16.31■□□□□ 0.2
DDX54-203ENST00000546869 SMIM10L2BP0DMW5 78 aa16.31■□□□□ 0.2
DDX54-203ENST00000546869 MCM7P33993 719 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms