RNA–Protein interactions for RNA: ENST00000546820.5

PTCH1-213, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 864 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-213ENST00000546820 CEP131Q9UPN4 1083 aa15.54■□□□□ 0.08
PTCH1-213ENST00000546820 SAMM50Q9Y512 469 aa15.54■□□□□ 0.08
PTCH1-213ENST00000546820 PCDHA10Q9Y5I2 948 aa15.54■□□□□ 0.08
PTCH1-213ENST00000546820 FRMPD3Q5JV73 1810 aa15.54■□□□□ 0.08
PTCH1-213ENST00000546820 CENPFP49454 3210 aa15.54■□□□□ 0.08
PTCH1-213ENST00000546820 A0A0U1RQG5 324 aaPredicted RBP15.53■□□□□ 0.08
PTCH1-213ENST00000546820 WDR64B1ANS9 1081 aa15.53■□□□□ 0.08
PTCH1-213ENST00000546820 ATG7O95352 703 aa15.53■□□□□ 0.08
PTCH1-213ENST00000546820 BMP15O95972 392 aa15.53■□□□□ 0.08
PTCH1-213ENST00000546820 PSAPP07602 524 aa15.53■□□□□ 0.08
PTCH1-213ENST00000546820 TXKP42681 527 aa15.53■□□□□ 0.08
PTCH1-213ENST00000546820 RESTQ13127 1097 aa15.53■□□□□ 0.08
PTCH1-213ENST00000546820 UTP14CQ5TAP6 766 aaKnown RBP15.53■□□□□ 0.08
PTCH1-213ENST00000546820 FAM160B1Q5W0V3 765 aa15.53■□□□□ 0.08
PTCH1-213ENST00000546820 SLC39A5Q6ZMH5 540 aa15.53■□□□□ 0.08
PTCH1-213ENST00000546820 UBE2Q1Q7Z7E8 422 aa15.53■□□□□ 0.08
PTCH1-213ENST00000546820 RDM1Q8NG50 284 aa15.53■□□□□ 0.08
PTCH1-213ENST00000546820 HAS1Q92839 578 aa15.53■□□□□ 0.08
PTCH1-213ENST00000546820 GLG1Q92896 1179 aa15.53■□□□□ 0.08
PTCH1-213ENST00000546820 TNPO1Q92973 898 aaKnown RBP15.53■□□□□ 0.08
PTCH1-213ENST00000546820 PCDHB6Q9Y5E3 794 aa15.53■□□□□ 0.08
PTCH1-213ENST00000546820 H3BRB1 525 aa15.52■□□□□ 0.08
PTCH1-213ENST00000546820 BACH1O14867 736 aa15.52■□□□□ 0.08
PTCH1-213ENST00000546820 OR52Z1P0C646 297 aa15.52■□□□□ 0.08
PTCH1-213ENST00000546820 PTGDRQ13258 359 aa15.52■□□□□ 0.08
PTCH1-213ENST00000546820 ITGA7Q13683 1181 aa15.52■□□□□ 0.08
PTCH1-213ENST00000546820 TMEM266Q2M3C6 531 aa15.52■□□□□ 0.08
PTCH1-213ENST00000546820 ABHD15Q6UXT9 468 aa15.52■□□□□ 0.08
PTCH1-213ENST00000546820 MIER3Q7Z3K6 550 aa15.52■□□□□ 0.08
PTCH1-213ENST00000546820 ZNF396Q96N95 335 aaPredicted RBP15.52■□□□□ 0.08
PTCH1-213ENST00000546820 MTMR9Q96QG7 549 aa15.52■□□□□ 0.08
PTCH1-213ENST00000546820 C16orf70Q9BSU1 422 aa15.52■□□□□ 0.08
PTCH1-213ENST00000546820 TUT1Q9H6E5 874 aaKnown RBP15.52■□□□□ 0.08
PTCH1-213ENST00000546820 TTC12Q9H892 705 aaPredicted RBP15.52■□□□□ 0.08
PTCH1-213ENST00000546820 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.52■□□□□ 0.08
PTCH1-213ENST00000546820 DISC1Q9NRI5 854 aa15.52■□□□□ 0.08
PTCH1-213ENST00000546820 ERAP1Q9NZ08 941 aa15.52■□□□□ 0.08
PTCH1-213ENST00000546820 ARVCFO00192 962 aa15.51■□□□□ 0.07
PTCH1-213ENST00000546820 WNT7AO00755 349 aa15.51■□□□□ 0.07
PTCH1-213ENST00000546820 CHMP2AO43633 222 aa15.51■□□□□ 0.07
PTCH1-213ENST00000546820 LGR5O75473 907 aa15.51■□□□□ 0.07
PTCH1-213ENST00000546820 CCNE2O96020 404 aa15.51■□□□□ 0.07
PTCH1-213ENST00000546820 F2P00734 622 aa15.51■□□□□ 0.07
PTCH1-213ENST00000546820 LGALS2P05162 132 aa15.51■□□□□ 0.07
PTCH1-213ENST00000546820 SUPT20HL2P0C7V6 817 aa15.51■□□□□ 0.07
PTCH1-213ENST00000546820 RGS19P49795 217 aa15.51■□□□□ 0.07
PTCH1-213ENST00000546820 PSEN2P49810 448 aa15.51■□□□□ 0.07
PTCH1-213ENST00000546820 SLC26A2P50443 739 aa15.51■□□□□ 0.07
PTCH1-213ENST00000546820 STAT5BP51692 787 aa15.51■□□□□ 0.07
PTCH1-213ENST00000546820 ATN1P54259 1190 aaPredicted RBP15.51■□□□□ 0.07
PTCH1-213ENST00000546820 CHMP4BP1P59074 171 aa15.51■□□□□ 0.07
PTCH1-213ENST00000546820 PTPN11Q06124 597 aaPredicted RBP15.51■□□□□ 0.07
PTCH1-213ENST00000546820 PPP2R5CQ13362 524 aa15.51■□□□□ 0.07
PTCH1-213ENST00000546820 NBR1Q14596 966 aa15.51■□□□□ 0.07
PTCH1-213ENST00000546820 C1orf53Q5VUE5 145 aa15.51■□□□□ 0.07
PTCH1-213ENST00000546820 FOXD4L5Q5VV16 416 aaPredicted RBP15.51■□□□□ 0.07
PTCH1-213ENST00000546820 SWSAP1Q6NVH7 229 aa15.51■□□□□ 0.07
PTCH1-213ENST00000546820 PLPPR4Q7Z2D5 763 aa15.51■□□□□ 0.07
PTCH1-213ENST00000546820 FOXD4L4Q8WXT5 416 aaPredicted RBP15.51■□□□□ 0.07
PTCH1-213ENST00000546820 GJA10Q969M2 543 aa15.51■□□□□ 0.07
PTCH1-213ENST00000546820 RAB34Q9BZG1 259 aa15.51■□□□□ 0.07
PTCH1-213ENST00000546820 UNC45AQ9H3U1 944 aa15.51■□□□□ 0.07
PTCH1-213ENST00000546820 ZNF302Q9NR11 478 aa15.51■□□□□ 0.07
PTCH1-213ENST00000546820 RBM19Q9Y4C8 960 aaKnown RBP15.51■□□□□ 0.07
PTCH1-213ENST00000546820 MROH7Q68CQ1 1323 aa15.5■□□□□ 0.07
PTCH1-213ENST00000546820 EMSYQ7Z589 1322 aa15.5■□□□□ 0.07
PTCH1-213ENST00000546820 DKC1O60832 514 aaKnown RBP eCLIP15.5■□□□□ 0.07
PTCH1-213ENST00000546820 F13A1P00488 732 aa15.5■□□□□ 0.07
PTCH1-213ENST00000546820 ZNF286BP0CG31 522 aa15.5■□□□□ 0.07
PTCH1-213ENST00000546820 PRPHP41219 470 aa15.5■□□□□ 0.07
PTCH1-213ENST00000546820 NUCB2P80303 420 aa15.5■□□□□ 0.07
PTCH1-213ENST00000546820 MFSD10Q14728 455 aa15.5■□□□□ 0.07
PTCH1-213ENST00000546820 KIAA0753Q2KHM9 967 aa15.5■□□□□ 0.07
PTCH1-213ENST00000546820 NBPF20Q3BBV1 942 aa15.5■□□□□ 0.07
PTCH1-213ENST00000546820 NFRKBQ6P4R8 1299 aa15.5■□□□□ 0.07
PTCH1-213ENST00000546820 DTHD1Q6ZMT9 781 aa15.5■□□□□ 0.07
PTCH1-213ENST00000546820 C7orf31Q8N865 590 aa15.5■□□□□ 0.07
PTCH1-213ENST00000546820 C4orf32Q8N8J7 132 aa15.5■□□□□ 0.07
PTCH1-213ENST00000546820 KAT2BQ92831 832 aa15.5■□□□□ 0.07
PTCH1-213ENST00000546820 TMEM60Q9H2L4 133 aa15.5■□□□□ 0.07
PTCH1-213ENST00000546820 ATP6V1DQ9Y5K8 247 aa15.5■□□□□ 0.07
PTCH1-213ENST00000546820 STK24Q9Y6E0 443 aa15.5■□□□□ 0.07
PTCH1-213ENST00000546820 DOCK5Q9H7D0 1870 aa15.49■□□□□ 0.07
PTCH1-213ENST00000546820 IGKV6D-21A0A0A0MT36 114 aa15.49■□□□□ 0.07
PTCH1-213ENST00000546820 DCDC2CA8MYV0 355 aa15.49■□□□□ 0.07
PTCH1-213ENST00000546820 HAS3O00219 553 aa15.49■□□□□ 0.07
PTCH1-213ENST00000546820 TLR3O15455 904 aaKnown RBP15.49■□□□□ 0.07
PTCH1-213ENST00000546820 GNAT1P11488 350 aa15.49■□□□□ 0.07
PTCH1-213ENST00000546820 TECP42680 631 aa15.49■□□□□ 0.07
PTCH1-213ENST00000546820 PSMC6P62333 389 aa15.49■□□□□ 0.07
PTCH1-213ENST00000546820 PDIA5Q14554 519 aa15.49■□□□□ 0.07
PTCH1-213ENST00000546820 EPHA7Q15375 998 aa15.49■□□□□ 0.07
PTCH1-213ENST00000546820 FAM47CQ5HY64 1035 aa15.49■□□□□ 0.07
PTCH1-213ENST00000546820 ARL6IP4Q66PJ3 421 aaKnown RBP15.49■□□□□ 0.07
PTCH1-213ENST00000546820 ATL3Q6DD88 541 aa15.49■□□□□ 0.07
PTCH1-213ENST00000546820 NCAPH2Q6IBW4 605 aa15.49■□□□□ 0.07
PTCH1-213ENST00000546820 PDXDC2PQ6P474 469 aa15.49■□□□□ 0.07
PTCH1-213ENST00000546820 B3GNT9Q6UX72 402 aa15.49■□□□□ 0.07
PTCH1-213ENST00000546820 CKAP2LQ8IYA6 745 aa15.49■□□□□ 0.07
PTCH1-213ENST00000546820 SLC43A3Q8NBI5 491 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms