RNA–Protein interactions for RNA: ENST00000546519.1

SLC38A1-203, Transcript of solute carrier family 38 member 1, humanhuman

TSL 3

Gene SLC38A1, Length 309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-203ENST00000546519 CDHR1Q96JP9 859 aa25.29■■□□□ 1.64
SLC38A1-203ENST00000546519 MTMR9Q96QG7 549 aa25.29■■□□□ 1.64
SLC38A1-203ENST00000546519 TMEM39AQ9NV64 488 aa25.29■■□□□ 1.64
SLC38A1-203ENST00000546519 SYNGAP1Q96PV0 1343 aa25.29■■□□□ 1.64
SLC38A1-203ENST00000546519 MCM3APO60318 1980 aa25.29■■□□□ 1.64
SLC38A1-203ENST00000546519 KIAA1217Q5T5P2 1943 aa25.28■■□□□ 1.64
SLC38A1-203ENST00000546519 ARMCX2Q7L311 632 aa25.28■■□□□ 1.64
SLC38A1-203ENST00000546519 SLFN12Q8IYM2 578 aa25.28■■□□□ 1.64
SLC38A1-203ENST00000546519 FAM20AQ96MK3 541 aa25.28■■□□□ 1.64
SLC38A1-203ENST00000546519 TMEM60Q9H2L4 133 aa25.28■■□□□ 1.64
SLC38A1-203ENST00000546519 ADAMTS4O75173 837 aa25.27■■□□□ 1.64
SLC38A1-203ENST00000546519 FAAP100Q0VG06 881 aa25.27■■□□□ 1.64
SLC38A1-203ENST00000546519 CYP2W1Q8TAV3 490 aa25.27■■□□□ 1.64
SLC38A1-203ENST00000546519 ETNPPLQ8TBG4 499 aa25.27■■□□□ 1.64
SLC38A1-203ENST00000546519 NRBP1Q9UHY1 535 aa25.27■■□□□ 1.64
SLC38A1-203ENST00000546519 SRPRBQ9Y5M8 271 aaKnown RBP25.27■■□□□ 1.64
SLC38A1-203ENST00000546519 AKR1A1P14550 325 aa25.26■■□□□ 1.63
SLC38A1-203ENST00000546519 DNAJB2P25686 324 aa25.26■■□□□ 1.63
SLC38A1-203ENST00000546519 ICAM3P32942 547 aa25.26■■□□□ 1.63
SLC38A1-203ENST00000546519 IRX5P78411 483 aaPredicted RBP25.26■■□□□ 1.63
SLC38A1-203ENST00000546519 MTMR1Q13613 665 aa25.26■■□□□ 1.63
SLC38A1-203ENST00000546519 KRI1Q8N9T8 703 aaKnown RBP25.26■■□□□ 1.63
SLC38A1-203ENST00000546519 GDPD2Q9HCC8 539 aa25.26■■□□□ 1.63
SLC38A1-203ENST00000546519 VTA1Q9NP79 307 aa25.26■■□□□ 1.63
SLC38A1-203ENST00000546519 TMEM265A0A087WTH1 108 aa25.25■■□□□ 1.63
SLC38A1-203ENST00000546519 MSH4O15457 936 aa25.25■■□□□ 1.63
SLC38A1-203ENST00000546519 RGS20O76081 388 aa25.25■■□□□ 1.63
SLC38A1-203ENST00000546519 KCNV1Q6PIU1 500 aa25.25■■□□□ 1.63
SLC38A1-203ENST00000546519 HAS1Q92839 578 aa25.25■■□□□ 1.63
SLC38A1-203ENST00000546519 SLC5A5Q92911 643 aa25.25■■□□□ 1.63
SLC38A1-203ENST00000546519 KCNH7Q9NS40 1196 aa25.25■■□□□ 1.63
SLC38A1-203ENST00000546519 FBXO2Q9UK22 296 aaPredicted RBP25.25■■□□□ 1.63
SLC38A1-203ENST00000546519 SYNRGQ9UMZ2 1314 aa25.25■■□□□ 1.63
SLC38A1-203ENST00000546519 MYADML2A6NDP7 307 aa25.24■■□□□ 1.63
SLC38A1-203ENST00000546519 ME1P48163 572 aa25.24■■□□□ 1.63
SLC38A1-203ENST00000546519 ACLYP53396 1101 aa25.24■■□□□ 1.63
SLC38A1-203ENST00000546519 RIT2Q99578 217 aa25.24■■□□□ 1.63
SLC38A1-203ENST00000546519 WDR11Q9BZH6 1224 aa25.24■■□□□ 1.63
SLC38A1-203ENST00000546519 STARD7Q9NQZ5 370 aa25.24■■□□□ 1.63
SLC38A1-203ENST00000546519 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.24■■□□□ 1.63
SLC38A1-203ENST00000546519 HSFX4A0A1B0GTS1 333 aaPredicted RBP25.23■■□□□ 1.63
SLC38A1-203ENST00000546519 HSFX3A0A1B0GWH4 333 aaPredicted RBP25.23■■□□□ 1.63
SLC38A1-203ENST00000546519 SPATA31C2B4DYI2 1134 aa25.23■■□□□ 1.63
SLC38A1-203ENST00000546519 MARCH6O60337 910 aa25.23■■□□□ 1.63
SLC38A1-203ENST00000546519 CUTAO60888 179 aa25.23■■□□□ 1.63
SLC38A1-203ENST00000546519 ARP10275 920 aa25.23■■□□□ 1.63
SLC38A1-203ENST00000546519 TGFB3P10600 412 aa25.23■■□□□ 1.63
SLC38A1-203ENST00000546519 MARCKSP29966 332 aaPredicted RBP25.23■■□□□ 1.63
SLC38A1-203ENST00000546519 MCM4P33991 863 aa25.23■■□□□ 1.63
SLC38A1-203ENST00000546519 FXR2P51116 673 aaKnown RBP eCLIP25.23■■□□□ 1.63
SLC38A1-203ENST00000546519 DTHD1Q6ZMT9 781 aa25.23■■□□□ 1.63
SLC38A1-203ENST00000546519 ZNF579Q8NAF0 562 aaKnown RBP25.23■■□□□ 1.63
SLC38A1-203ENST00000546519 ZFP91Q96JP5 570 aaPredicted RBP25.23■■□□□ 1.63
SLC38A1-203ENST00000546519 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.23■■□□□ 1.63
SLC38A1-203ENST00000546519 ZNF577Q9BSK1 485 aa25.23■■□□□ 1.63
SLC38A1-203ENST00000546519 ABHD16BQ9H3Z7 469 aa25.23■■□□□ 1.63
SLC38A1-203ENST00000546519 AGO4Q9HCK5 861 aaKnown RBP25.23■■□□□ 1.63
SLC38A1-203ENST00000546519 PCDHA7Q9UN72 937 aa25.23■■□□□ 1.63
SLC38A1-203ENST00000546519 MRVI1Q9Y6F6 885 aa25.23■■□□□ 1.63
SLC38A1-203ENST00000546519 DDX11L8A8MPP1 907 aa25.22■■□□□ 1.63
SLC38A1-203ENST00000546519 IPO5O00410 1097 aaKnown RBP25.22■■□□□ 1.63
SLC38A1-203ENST00000546519 SNAI1O95863 264 aaPredicted RBP25.22■■□□□ 1.63
SLC38A1-203ENST00000546519 TMEM266Q2M3C6 531 aa25.22■■□□□ 1.63
SLC38A1-203ENST00000546519 ANKRD33Q7Z3H0 272 aa25.22■■□□□ 1.63
SLC38A1-203ENST00000546519 SYMPKQ92797 1274 aaKnown RBP25.22■■□□□ 1.63
SLC38A1-203ENST00000546519 RAB34Q9BZG1 259 aa25.22■■□□□ 1.63
SLC38A1-203ENST00000546519 ZNF576Q9H609 170 aa25.22■■□□□ 1.63
SLC38A1-203ENST00000546519 TBC1D22BQ9NU19 505 aa25.22■■□□□ 1.63
SLC38A1-203ENST00000546519 GRXCR1A8MXD5 290 aa25.21■■□□□ 1.63
SLC38A1-203ENST00000546519 DCDC2CA8MYV0 355 aa25.21■■□□□ 1.63
SLC38A1-203ENST00000546519 PTMSP20962 102 aa25.21■■□□□ 1.63
SLC38A1-203ENST00000546519 LONP1P36776 959 aaKnown RBP25.21■■□□□ 1.63
SLC38A1-203ENST00000546519 SEMA3FQ13275 785 aa25.21■■□□□ 1.63
SLC38A1-203ENST00000546519 KCNA10Q16322 511 aa25.21■■□□□ 1.63
SLC38A1-203ENST00000546519 AXDND1Q5T1B0 1012 aaPredicted RBP25.21■■□□□ 1.63
SLC38A1-203ENST00000546519 ADALQ6DHV7 355 aa25.21■■□□□ 1.63
SLC38A1-203ENST00000546519 KLHDC9Q8NEP7 349 aa25.21■■□□□ 1.63
SLC38A1-203ENST00000546519 SCFD2Q8WU76 684 aa25.21■■□□□ 1.63
SLC38A1-203ENST00000546519 PPM1EQ8WY54 764 aa25.21■■□□□ 1.63
SLC38A1-203ENST00000546519 SENP7Q9BQF6 1050 aa25.21■■□□□ 1.63
SLC38A1-203ENST00000546519 TSEN34Q9BSV6 310 aaKnown RBP25.21■■□□□ 1.63
SLC38A1-203ENST00000546519 KATNBL1Q9H079 304 aa25.21■■□□□ 1.63
SLC38A1-203ENST00000546519 ZHX1Q9UKY1 873 aaPredicted RBP25.21■■□□□ 1.63
SLC38A1-203ENST00000546519 DDX49Q9Y6V7 483 aaKnown RBP25.21■■□□□ 1.63
SLC38A1-203ENST00000546519 NFASCO94856 1347 aa25.2■■□□□ 1.62
SLC38A1-203ENST00000546519 A0A1W2PQ27 194 aa25.2■■□□□ 1.62
SLC38A1-203ENST00000546519 A0A1W2PQ64 194 aa25.2■■□□□ 1.62
SLC38A1-203ENST00000546519 A0A1W2PQD8 194 aa25.2■■□□□ 1.62
SLC38A1-203ENST00000546519 RBM47A0AV96 593 aaKnown RBP25.2■■□□□ 1.62
SLC38A1-203ENST00000546519 PSMD10O75832 226 aa25.2■■□□□ 1.62
SLC38A1-203ENST00000546519 PBX2P40425 430 aa25.2■■□□□ 1.62
SLC38A1-203ENST00000546519 TXKP42681 527 aa25.2■■□□□ 1.62
SLC38A1-203ENST00000546519 PDIA5Q14554 519 aa25.2■■□□□ 1.62
SLC38A1-203ENST00000546519 CCSAPQ6IQ19 270 aaPredicted RBP25.2■■□□□ 1.62
SLC38A1-203ENST00000546519 TIFAQ96CG3 184 aa25.2■■□□□ 1.62
SLC38A1-203ENST00000546519 AK8Q96MA6 479 aa25.2■■□□□ 1.62
SLC38A1-203ENST00000546519 TOX2Q96NM4 488 aa25.2■■□□□ 1.62
SLC38A1-203ENST00000546519 TTC12Q9H892 705 aaPredicted RBP25.2■■□□□ 1.62
SLC38A1-203ENST00000546519 TBX21Q9UL17 535 aa25.2■■□□□ 1.62
SLC38A1-203ENST00000546519 PCDHA12Q9UN75 941 aa25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms