RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 ALDH1B1P30837 517 aa8.62□□□□□ -1.03
UBR1-202ENST00000546274 MCM7P33993 719 aa8.62□□□□□ -1.03
UBR1-202ENST00000546274 RASA3Q14644 834 aa8.62□□□□□ -1.03
UBR1-202ENST00000546274 Q4G0T1 1027 aa8.62□□□□□ -1.03
UBR1-202ENST00000546274 NAALADL2Q58DX5 795 aa8.62□□□□□ -1.03
UBR1-202ENST00000546274 ODF2Q5BJF6 829 aa8.62□□□□□ -1.03
UBR1-202ENST00000546274 ZNF658Q5TYW1 1059 aaPredicted RBP8.62□□□□□ -1.03
UBR1-202ENST00000546274 RRAGBQ5VZM2 374 aa8.62□□□□□ -1.03
UBR1-202ENST00000546274 MAATS1Q7Z4T9 603 aa8.62□□□□□ -1.03
UBR1-202ENST00000546274 CNBD1Q8NA66 436 aa8.62□□□□□ -1.03
UBR1-202ENST00000546274 JAKMIP2Q96AA8 810 aa8.62□□□□□ -1.03
UBR1-202ENST00000546274 NSUN4Q96CB9 384 aaKnown RBP8.62□□□□□ -1.03
UBR1-202ENST00000546274 LRRC1Q9BTT6 524 aa8.62□□□□□ -1.03
UBR1-202ENST00000546274 TAB2Q9NYJ8 693 aa8.62□□□□□ -1.03
UBR1-202ENST00000546274 STK38LQ9Y2H1 464 aa8.62□□□□□ -1.03
UBR1-202ENST00000546274 COL24A1Q17RW2 1714 aa8.62□□□□□ -1.03
UBR1-202ENST00000546274 KCNJ18B7U540 433 aa8.62□□□□□ -1.03
UBR1-202ENST00000546274 M0R2N6 131 aa8.62□□□□□ -1.03
UBR1-202ENST00000546274 FUT4P22083 530 aa8.62□□□□□ -1.03
UBR1-202ENST00000546274 PRCPP42785 496 aa8.62□□□□□ -1.03
UBR1-202ENST00000546274 PMS1P54277 932 aaKnown RBP8.62□□□□□ -1.03
UBR1-202ENST00000546274 PAK1Q13153 545 aa8.62□□□□□ -1.03
UBR1-202ENST00000546274 KCNJ12Q14500 433 aa8.62□□□□□ -1.03
UBR1-202ENST00000546274 FAM47AQ5JRC9 791 aa8.62□□□□□ -1.03
UBR1-202ENST00000546274 CRELD2Q6UXH1 353 aaPredicted RBP8.62□□□□□ -1.03
UBR1-202ENST00000546274 TRAPPC11Q7Z392 1133 aa8.62□□□□□ -1.03
UBR1-202ENST00000546274 LONP2Q86WA8 852 aa8.62□□□□□ -1.03
UBR1-202ENST00000546274 TMTC1Q8IUR5 882 aa8.62□□□□□ -1.03
UBR1-202ENST00000546274 LRRC15Q8TF66 581 aa8.62□□□□□ -1.03
UBR1-202ENST00000546274 MAIP1Q8WWC4 291 aa8.62□□□□□ -1.03
UBR1-202ENST00000546274 NELFBQ8WX92 580 aa8.62□□□□□ -1.03
UBR1-202ENST00000546274 L3MBTL3Q96JM7 780 aaPredicted RBP8.62□□□□□ -1.03
UBR1-202ENST00000546274 WDR35Q9P2L0 1181 aa8.62□□□□□ -1.03
UBR1-202ENST00000546274 LNPEPQ9UIQ6 1025 aa8.62□□□□□ -1.03
UBR1-202ENST00000546274 RPN1P04843 607 aaKnown RBP8.62□□□□□ -1.03
UBR1-202ENST00000546274 CYP2D6P10635 497 aa8.62□□□□□ -1.03
UBR1-202ENST00000546274 ALDH3A1P30838 453 aa8.62□□□□□ -1.03
UBR1-202ENST00000546274 CA8P35219 290 aa8.62□□□□□ -1.03
UBR1-202ENST00000546274 TRAPPC10P48553 1259 aa8.62□□□□□ -1.03
UBR1-202ENST00000546274 GUCY2FP51841 1108 aa8.62□□□□□ -1.03
UBR1-202ENST00000546274 SETDB1Q15047 1291 aa8.62□□□□□ -1.03
UBR1-202ENST00000546274 SFMBT2Q5VUG0 894 aa8.62□□□□□ -1.03
UBR1-202ENST00000546274 PHC3Q8NDX5 983 aa8.62□□□□□ -1.03
UBR1-202ENST00000546274 PSMB7Q99436 277 aa8.62□□□□□ -1.03
UBR1-202ENST00000546274 CHP1Q99653 195 aa8.62□□□□□ -1.03
UBR1-202ENST00000546274 DCP1AQ9NPI6 582 aaPredicted RBP8.62□□□□□ -1.03
UBR1-202ENST00000546274 NAV1Q8NEY1 1877 aa8.62□□□□□ -1.03
UBR1-202ENST00000546274 TRIM49BA6NDI0 452 aa8.61□□□□□ -1.03
UBR1-202ENST00000546274 EPB41P11171 864 aaKnown RBP8.61□□□□□ -1.03
UBR1-202ENST00000546274 ZNF24P17028 368 aa8.61□□□□□ -1.03
UBR1-202ENST00000546274 EIF4BP23588 611 aaKnown RBP8.61□□□□□ -1.03
UBR1-202ENST00000546274 UBE4AQ14139 1066 aa8.61□□□□□ -1.03
UBR1-202ENST00000546274 ERFEQ4G0M1 354 aa8.61□□□□□ -1.03
UBR1-202ENST00000546274 ALS2CLQ60I27 953 aa8.61□□□□□ -1.03
UBR1-202ENST00000546274 TYW1BQ6NUM6 668 aa8.61□□□□□ -1.03
UBR1-202ENST00000546274 CYP26C1Q6V0L0 522 aa8.61□□□□□ -1.03
UBR1-202ENST00000546274 MIPOL1Q8TD10 442 aa8.61□□□□□ -1.03
UBR1-202ENST00000546274 IFT81Q8WYA0 676 aa8.61□□□□□ -1.03
UBR1-202ENST00000546274 NAF1Q96HR8 494 aaKnown RBP8.61□□□□□ -1.03
UBR1-202ENST00000546274 MINPP1Q9UNW1 487 aa8.61□□□□□ -1.03
UBR1-202ENST00000546274 LOC102724428A0A0B4J2F2 783 aa8.61□□□□□ -1.03
UBR1-202ENST00000546274 ZNF233A6NK53 670 aa8.61□□□□□ -1.03
UBR1-202ENST00000546274 A8MUI8 341 aa8.61□□□□□ -1.03
UBR1-202ENST00000546274 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.61□□□□□ -1.03
UBR1-202ENST00000546274 KLRC4O43908 158 aa8.61□□□□□ -1.03
UBR1-202ENST00000546274 PFDN1O60925 122 aa8.61□□□□□ -1.03
UBR1-202ENST00000546274 DNAJC8O75937 253 aaPredicted RBP8.61□□□□□ -1.03
UBR1-202ENST00000546274 SIK1P57059 783 aa8.61□□□□□ -1.03
UBR1-202ENST00000546274 MECOMQ03112 1051 aa8.61□□□□□ -1.03
UBR1-202ENST00000546274 CKAP4Q07065 602 aaKnown RBP8.61□□□□□ -1.03
UBR1-202ENST00000546274 SLC35G1Q2M3R5 365 aa8.61□□□□□ -1.03
UBR1-202ENST00000546274 GKAP1Q5VSY0 366 aaPredicted RBP8.61□□□□□ -1.03
UBR1-202ENST00000546274 ADSSL1Q8N142 457 aa8.61□□□□□ -1.03
UBR1-202ENST00000546274 ZNF507Q8TCN5 953 aa8.61□□□□□ -1.03
UBR1-202ENST00000546274 SYT15Q9BQS2 421 aa8.61□□□□□ -1.03
UBR1-202ENST00000546274 PPP1R12CQ9BZL4 782 aa8.61□□□□□ -1.03
UBR1-202ENST00000546274 RANBP17Q9H2T7 1088 aaKnown RBP8.61□□□□□ -1.03
UBR1-202ENST00000546274 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.61□□□□□ -1.031e-7■■■■■ 44.7
UBR1-202ENST00000546274 GGA2Q9UJY4 613 aa8.61□□□□□ -1.03
UBR1-202ENST00000546274 GNAQP50148 359 aa8.6□□□□□ -1.03
UBR1-202ENST00000546274 ADAM9Q13443 819 aa8.6□□□□□ -1.03
UBR1-202ENST00000546274 ARL6IP4Q66PJ3 421 aaKnown RBP8.6□□□□□ -1.03
UBR1-202ENST00000546274 TMEM154Q6P9G4 183 aa8.6□□□□□ -1.03
UBR1-202ENST00000546274 WDR59Q6PJI9 974 aa8.6□□□□□ -1.03
UBR1-202ENST00000546274 SEPT14Q6ZU15 432 aa8.6□□□□□ -1.03
UBR1-202ENST00000546274 TMEM110Q86TL2 294 aa8.6□□□□□ -1.03
UBR1-202ENST00000546274 HOOK3Q86VS8 718 aa8.6□□□□□ -1.03
UBR1-202ENST00000546274 CCHCR1Q8TD31 782 aa8.6□□□□□ -1.03
UBR1-202ENST00000546274 ZFAND2BQ8WV99 257 aa8.6□□□□□ -1.03
UBR1-202ENST00000546274 NUP88Q99567 741 aaPredicted RBP8.6□□□□□ -1.03
UBR1-202ENST00000546274 DNAJC7Q99615 494 aa8.6□□□□□ -1.03
UBR1-202ENST00000546274 SLX1AQ9BQ83 275 aa8.6□□□□□ -1.03
UBR1-202ENST00000546274 GGT7Q9UJ14 662 aa8.6□□□□□ -1.03
UBR1-202ENST00000546274 DDX60LQ5H9U9 1706 aaKnown RBP8.6□□□□□ -1.03
UBR1-202ENST00000546274 TTC26A0AVF1 554 aa8.6□□□□□ -1.03
UBR1-202ENST00000546274 PP2D1A8MPX8 630 aa8.6□□□□□ -1.03
UBR1-202ENST00000546274 LIN7AO14910 233 aaPredicted RBP8.6□□□□□ -1.03
UBR1-202ENST00000546274 NAT1P18440 290 aa8.6□□□□□ -1.03
UBR1-202ENST00000546274 KRT9P35527 623 aa8.6□□□□□ -1.03
UBR1-202ENST00000546274 LONP1P36776 959 aaKnown RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms