RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 GINS2Q9Y248 185 aa10.73□□□□□ -0.69
TRAF1-203ENST00000546084 LAMA4Q16363 1823 aa10.73□□□□□ -0.69
TRAF1-203ENST00000546084 ARHGEF35A5YM69 484 aa10.73□□□□□ -0.69
TRAF1-203ENST00000546084 OPA1O60313 960 aa10.73□□□□□ -0.69
TRAF1-203ENST00000546084 NEFHP12036 1026 aa10.73□□□□□ -0.69
TRAF1-203ENST00000546084 WDR93Q6P2C0 686 aa10.73□□□□□ -0.69
TRAF1-203ENST00000546084 OR2W6PQ8NHA6 318 aa10.73□□□□□ -0.69
TRAF1-203ENST00000546084 DHTKD1Q96HY7 919 aaPredicted RBP10.73□□□□□ -0.69
TRAF1-203ENST00000546084 FAM84AQ96KN4 292 aa10.73□□□□□ -0.69
TRAF1-203ENST00000546084 RPGRIP1Q96KN7 1286 aa10.73□□□□□ -0.69
TRAF1-203ENST00000546084 ANO3Q9BYT9 981 aa10.73□□□□□ -0.69
TRAF1-203ENST00000546084 DMGDHQ9UI17 866 aaKnown RBP10.73□□□□□ -0.69
TRAF1-203ENST00000546084 REXO2Q9Y3B8 237 aaKnown RBP10.73□□□□□ -0.69
TRAF1-203ENST00000546084 RGPD5Q99666 1765 aa10.72□□□□□ -0.69
TRAF1-203ENST00000546084 SYF2O95926 243 aaKnown RBP10.72□□□□□ -0.69
TRAF1-203ENST00000546084 INPP5BP32019 993 aa10.72□□□□□ -0.69
TRAF1-203ENST00000546084 PSMC6P62333 389 aa10.72□□□□□ -0.69
TRAF1-203ENST00000546084 HERVK_113P62684 666 aa10.72□□□□□ -0.69
TRAF1-203ENST00000546084 MTM1Q13496 603 aa10.72□□□□□ -0.69
TRAF1-203ENST00000546084 MAN2A1Q16706 1144 aa10.72□□□□□ -0.69
TRAF1-203ENST00000546084 EXOC3L4Q17RC7 722 aa10.72□□□□□ -0.69
TRAF1-203ENST00000546084 ARL6IP4Q66PJ3 421 aaKnown RBP10.72□□□□□ -0.69
TRAF1-203ENST00000546084 EEPD1Q7L9B9 569 aa10.72□□□□□ -0.69
TRAF1-203ENST00000546084 SH3RF1Q7Z6J0 888 aa10.72□□□□□ -0.69
TRAF1-203ENST00000546084 PPM1KQ8N3J5 372 aa10.72□□□□□ -0.69
TRAF1-203ENST00000546084 DDX47Q9H0S4 455 aaKnown RBP10.72□□□□□ -0.69
TRAF1-203ENST00000546084 FBXO28Q9NVF7 368 aa10.72□□□□□ -0.69
TRAF1-203ENST00000546084 MTMR4Q9NYA4 1195 aa10.72□□□□□ -0.69
TRAF1-203ENST00000546084 COL4A3BPQ9Y5P4 624 aa10.72□□□□□ -0.69
TRAF1-203ENST00000546084 AFDNP55196 1824 aaKnown RBP10.72□□□□□ -0.69
TRAF1-203ENST00000546084 F5H6K3 240 aa10.72□□□□□ -0.69
TRAF1-203ENST00000546084 KRT14P02533 472 aa10.72□□□□□ -0.69
TRAF1-203ENST00000546084 TNFAIP3P21580 790 aa10.72□□□□□ -0.69
TRAF1-203ENST00000546084 KLRC3Q07444 240 aa10.72□□□□□ -0.69
TRAF1-203ENST00000546084 TRIP13Q15645 432 aaPredicted RBP10.72□□□□□ -0.69
TRAF1-203ENST00000546084 FAM83BQ5T0W9 1011 aa10.72□□□□□ -0.69
TRAF1-203ENST00000546084 TADA2BQ86TJ2 420 aa10.72□□□□□ -0.69
TRAF1-203ENST00000546084 FAM178BQ8IXR5 827 aa10.72□□□□□ -0.69
TRAF1-203ENST00000546084 NUP58Q9BVL2 599 aa10.72□□□□□ -0.69
TRAF1-203ENST00000546084 SEMA6BQ9H3T3 888 aa10.72□□□□□ -0.69
TRAF1-203ENST00000546084 USP20Q9Y2K6 914 aa10.72□□□□□ -0.69
TRAF1-203ENST00000546084 H0YIN7 160 aa10.72□□□□□ -0.69
TRAF1-203ENST00000546084 PSMD14O00487 310 aa10.72□□□□□ -0.69
TRAF1-203ENST00000546084 KRIT1O00522 736 aa10.72□□□□□ -0.69
TRAF1-203ENST00000546084 EIF2AK2P19525 551 aaKnown RBP10.72□□□□□ -0.69
TRAF1-203ENST00000546084 CRKP46108 304 aa10.72□□□□□ -0.69
TRAF1-203ENST00000546084 AMPD2Q01433 879 aa10.72□□□□□ -0.69
TRAF1-203ENST00000546084 NAALADL2Q58DX5 795 aa10.72□□□□□ -0.69
TRAF1-203ENST00000546084 CCNI2Q6ZMN8 369 aaPredicted RBP10.72□□□□□ -0.69
TRAF1-203ENST00000546084 EFCAB13Q8IY85 973 aa10.72□□□□□ -0.69
TRAF1-203ENST00000546084 RETREG2Q8NC44 543 aa10.72□□□□□ -0.69
TRAF1-203ENST00000546084 TRIM58Q8NG06 486 aa10.72□□□□□ -0.69
TRAF1-203ENST00000546084 NEDD1Q8NHV4 660 aa10.72□□□□□ -0.69
TRAF1-203ENST00000546084 TBC1D22AQ8WUA7 517 aa10.72□□□□□ -0.69
TRAF1-203ENST00000546084 HOOK2Q96ED9 719 aa10.72□□□□□ -0.69
TRAF1-203ENST00000546084 FZD1Q9UP38 647 aa10.72□□□□□ -0.69
TRAF1-203ENST00000546084 PDE2AO00408 941 aaPredicted RBP10.71□□□□□ -0.69
TRAF1-203ENST00000546084 NF2P35240 595 aa10.71□□□□□ -0.69
TRAF1-203ENST00000546084 IFNAR2P48551 515 aa10.71□□□□□ -0.69
TRAF1-203ENST00000546084 CORO7P57737 925 aa10.71□□□□□ -0.69
TRAF1-203ENST00000546084 DHX9Q08211 1270 aaKnown RBP10.71□□□□□ -0.69
TRAF1-203ENST00000546084 KCNH2Q12809 1159 aa10.71□□□□□ -0.69
TRAF1-203ENST00000546084 SNX1Q13596 522 aa10.71□□□□□ -0.69
TRAF1-203ENST00000546084 NBPF9Q3BBW0 867 aa10.71□□□□□ -0.69
TRAF1-203ENST00000546084 CFAP221Q4G0U5 840 aa10.71□□□□□ -0.69
TRAF1-203ENST00000546084 C2CD6Q53TS8 623 aa10.71□□□□□ -0.69
TRAF1-203ENST00000546084 PPP1R18Q6NYC8 613 aa10.71□□□□□ -0.69
TRAF1-203ENST00000546084 OTUD6BQ8N6M0 293 aa10.71□□□□□ -0.69
TRAF1-203ENST00000546084 PPP1R16BQ96T49 567 aa10.71□□□□□ -0.69
TRAF1-203ENST00000546084 HDAC9Q9UKV0 1011 aa10.71□□□□□ -0.69
TRAF1-203ENST00000546084 FAM184BQ9ULE4 1060 aa10.71□□□□□ -0.69
TRAF1-203ENST00000546084 FAM169AQ9Y6X4 670 aa10.71□□□□□ -0.69
TRAF1-203ENST00000546084 SPOPO43791 374 aa10.71□□□□□ -0.69
TRAF1-203ENST00000546084 ECE1P42892 770 aa10.71□□□□□ -0.69
TRAF1-203ENST00000546084 PLCB3Q01970 1234 aa10.71□□□□□ -0.69
TRAF1-203ENST00000546084 KCNA1Q09470 495 aa10.71□□□□□ -0.69
TRAF1-203ENST00000546084 FUT2Q10981 343 aa10.71□□□□□ -0.69
TRAF1-203ENST00000546084 PPFIA1Q13136 1202 aa10.71□□□□□ -0.69
TRAF1-203ENST00000546084 BIRC3Q13489 604 aa10.71□□□□□ -0.69
TRAF1-203ENST00000546084 MESDQ14696 234 aa10.71□□□□□ -0.69
TRAF1-203ENST00000546084 LRCH2Q5VUJ6 765 aa10.71□□□□□ -0.69
TRAF1-203ENST00000546084 ZNF513Q8N8E2 541 aaPredicted RBP10.71□□□□□ -0.69
TRAF1-203ENST00000546084 JMJD4Q9H9V9 463 aa10.71□□□□□ -0.69
TRAF1-203ENST00000546084 MLXIPLQ9NP71 852 aa10.71□□□□□ -0.69
TRAF1-203ENST00000546084 GCNT4Q9P109 453 aa10.71□□□□□ -0.69
TRAF1-203ENST00000546084 CAPN11Q9UMQ6 739 aa10.71□□□□□ -0.69
TRAF1-203ENST00000546084 FRMD4BQ9Y2L6 1034 aa10.71□□□□□ -0.69
TRAF1-203ENST00000546084 RABGAP1Q9Y3P9 1069 aa10.71□□□□□ -0.69
TRAF1-203ENST00000546084 PLEKHG2Q9H7P9 1386 aa10.71□□□□□ -0.7
TRAF1-203ENST00000546084 A0A087WUV0 522 aaPredicted RBP10.71□□□□□ -0.7
TRAF1-203ENST00000546084 HAUS3Q68CZ6 603 aa10.71□□□□□ -0.7
TRAF1-203ENST00000546084 KIAA0895Q8NCT3 520 aa10.71□□□□□ -0.7
TRAF1-203ENST00000546084 SPIRE2Q8WWL2 714 aa10.71□□□□□ -0.7
TRAF1-203ENST00000546084 LZTS2Q9BRK4 669 aa10.71□□□□□ -0.7
TRAF1-203ENST00000546084 FGFBP2Q9BYJ0 223 aa10.71□□□□□ -0.7
TRAF1-203ENST00000546084 ANKRD62A6NC57 917 aa10.7□□□□□ -0.7
TRAF1-203ENST00000546084 LRRC10BA6NIK2 292 aa10.7□□□□□ -0.7
TRAF1-203ENST00000546084 E7EVH7 732 aa10.7□□□□□ -0.7
TRAF1-203ENST00000546084 MYBP10242 640 aa10.7□□□□□ -0.7
TRAF1-203ENST00000546084 IRAK1P51617 712 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms