RNA–Protein interactions for RNA: ENST00000545942.5

CHD4-214, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 1 (best)

Gene CHD4, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-214ENST00000545942 REC8O95072 547 aa26.01■■□□□ 1.75
CHD4-214ENST00000545942 TAP1Q03518 808 aa26.01■■□□□ 1.75
CHD4-214ENST00000545942 BLOC1S2Q6QNY1 142 aa26.01■■□□□ 1.75
CHD4-214ENST00000545942 Q6ZUG5 572 aa26.01■■□□□ 1.75
CHD4-214ENST00000545942 NRCAMQ92823 1304 aa26.01■■□□□ 1.75
CHD4-214ENST00000545942 GLT8D2Q9H1C3 349 aa26.01■■□□□ 1.75
CHD4-214ENST00000545942 CHD7Q9P2D1 2997 aa26.01■■□□□ 1.75
CHD4-214ENST00000545942 VCANP13611 3396 aa26■■□□□ 1.75
CHD4-214ENST00000545942 SMCO2A6NFE2 343 aa26■■□□□ 1.75
CHD4-214ENST00000545942 ADAM17P78536 824 aa26■■□□□ 1.75
CHD4-214ENST00000545942 ARHGAP4P98171 946 aa26■■□□□ 1.75
CHD4-214ENST00000545942 APOBRQ0VD83 1088 aa26■■□□□ 1.75
CHD4-214ENST00000545942 CCDC85BQ15834 202 aaPredicted RBP26■■□□□ 1.75
CHD4-214ENST00000545942 TMCO2Q7Z6W1 182 aaPredicted RBP26■■□□□ 1.75
CHD4-214ENST00000545942 LMBR1Q8WVP7 490 aa26■■□□□ 1.75
CHD4-214ENST00000545942 BRF1Q92994 677 aa26■■□□□ 1.75
CHD4-214ENST00000545942 MXRA8Q9BRK3 442 aa26■■□□□ 1.75
CHD4-214ENST00000545942 CERS4Q9HA82 394 aa26■■□□□ 1.75
CHD4-214ENST00000545942 GSTTP1A0A1W2PQM5 241 aa25.99■■□□□ 1.75
CHD4-214ENST00000545942 ARHGEF15O94989 841 aa25.99■■□□□ 1.75
CHD4-214ENST00000545942 ADD1P35611 737 aaKnown RBP25.99■■□□□ 1.75
CHD4-214ENST00000545942 DBF4BQ8NFT6 615 aa25.99■■□□□ 1.75
CHD4-214ENST00000545942 PGBD1Q96JS3 809 aa25.99■■□□□ 1.75
CHD4-214ENST00000545942 ANO3Q9BYT9 981 aa25.99■■□□□ 1.75
CHD4-214ENST00000545942 KCNH7Q9NS40 1196 aa25.99■■□□□ 1.75
CHD4-214ENST00000545942 ERAP1Q9NZ08 941 aa25.99■■□□□ 1.75
CHD4-214ENST00000545942 DOCK5Q9H7D0 1870 aa25.98■■□□□ 1.75
CHD4-214ENST00000545942 GJB5O95377 273 aa25.98■■□□□ 1.75
CHD4-214ENST00000545942 CTSHP09668 335 aa25.98■■□□□ 1.75
CHD4-214ENST00000545942 AP3B2Q13367 1082 aa25.98■■□□□ 1.75
CHD4-214ENST00000545942 PLEKHG4Q58EX7 1191 aa25.98■■□□□ 1.75
CHD4-214ENST00000545942 FBXL16Q8N461 479 aa25.98■■□□□ 1.75
CHD4-214ENST00000545942 ARNTL2Q8WYA1 636 aa25.98■■□□□ 1.75
CHD4-214ENST00000545942 GLG1Q92896 1179 aa25.98■■□□□ 1.75
CHD4-214ENST00000545942 JPH1Q9HDC5 661 aaPredicted RBP25.98■■□□□ 1.75
CHD4-214ENST00000545942 PRDM6Q9NQX0 595 aa25.98■■□□□ 1.75
CHD4-214ENST00000545942 RPS6KB1P23443 525 aa25.97■■□□□ 1.75
CHD4-214ENST00000545942 CLK2P49760 499 aaKnown RBP25.97■■□□□ 1.75
CHD4-214ENST00000545942 PFKFB3Q16875 520 aaPredicted RBP25.97■■□□□ 1.75
CHD4-214ENST00000545942 CYP2W1Q8TAV3 490 aa25.97■■□□□ 1.75
CHD4-214ENST00000545942 RAD9AQ99638 391 aa25.97■■□□□ 1.75
CHD4-214ENST00000545942 SMARCAD1Q9H4L7 1026 aa25.97■■□□□ 1.75
CHD4-214ENST00000545942 SLC9A2Q9UBY0 812 aa25.97■■□□□ 1.75
CHD4-214ENST00000545942 MYO9BQ13459 2157 aa25.96■■□□□ 1.75
CHD4-214ENST00000545942 LCHNA4D1U4 455 aa25.96■■□□□ 1.75
CHD4-214ENST00000545942 EPOPA6NHQ4 379 aa25.96■■□□□ 1.75
CHD4-214ENST00000545942 RFXAPO00287 272 aa25.96■■□□□ 1.75
CHD4-214ENST00000545942 POU3F3P20264 500 aaPredicted RBP25.96■■□□□ 1.75
CHD4-214ENST00000545942 MARK3P27448 753 aa25.96■■□□□ 1.75
CHD4-214ENST00000545942 PSMA5P28066 241 aa25.96■■□□□ 1.75
CHD4-214ENST00000545942 SREBF1P36956 1147 aa25.96■■□□□ 1.75
CHD4-214ENST00000545942 PPFIA1Q13136 1202 aa25.96■■□□□ 1.75
CHD4-214ENST00000545942 CEP55Q53EZ4 464 aa25.96■■□□□ 1.75
CHD4-214ENST00000545942 SEPT8Q92599 483 aa25.96■■□□□ 1.75
CHD4-214ENST00000545942 SYMPKQ92797 1274 aaKnown RBP25.96■■□□□ 1.75
CHD4-214ENST00000545942 THEGQ9P2T0 379 aa25.96■■□□□ 1.75
CHD4-214ENST00000545942 NID2Q14112 1375 aa25.96■■□□□ 1.75
CHD4-214ENST00000545942 NFASCO94856 1347 aa25.95■■□□□ 1.75
CHD4-214ENST00000545942 RBAK-RBAKDNI3L0D1 243 aa25.95■■□□□ 1.75
CHD4-214ENST00000545942 GTPBP6O43824 516 aaPredicted RBP25.95■■□□□ 1.75
CHD4-214ENST00000545942 SCG2P13521 617 aa25.95■■□□□ 1.75
CHD4-214ENST00000545942 MKRN4PQ13434 485 aaPredicted RBP25.95■■□□□ 1.75
CHD4-214ENST00000545942 TJAP1Q5JTD0 557 aa25.95■■□□□ 1.75
CHD4-214ENST00000545942 TAF2Q6P1X5 1199 aa25.95■■□□□ 1.75
CHD4-214ENST00000545942 MICALL1Q8N3F8 863 aa25.95■■□□□ 1.75
CHD4-214ENST00000545942 ATXN2LQ8WWM7 1075 aaKnown RBP25.95■■□□□ 1.75
CHD4-214ENST00000545942 SDF4Q9BRK5 362 aa25.95■■□□□ 1.75
CHD4-214ENST00000545942 AGXT2Q9BYV1 514 aa25.95■■□□□ 1.75
CHD4-214ENST00000545942 TMEM260Q9NX78 707 aa25.95■■□□□ 1.75
CHD4-214ENST00000545942 CUL9Q8IWT3 2517 aa25.95■■□□□ 1.74
CHD4-214ENST00000545942 AMHP03971 560 aa25.94■■□□□ 1.74
CHD4-214ENST00000545942 ARP10275 920 aa25.94■■□□□ 1.74
CHD4-214ENST00000545942 GRIK4Q16099 956 aa25.94■■□□□ 1.74
CHD4-214ENST00000545942 FAM26DQ5JW98 314 aa25.94■■□□□ 1.74
CHD4-214ENST00000545942 LIN28BQ6ZN17 250 aaKnown RBP eCLIP25.94■■□□□ 1.741e-6■■■■□ 21.8
CHD4-214ENST00000545942 RPAINQ86UA6 219 aa25.94■■□□□ 1.74
CHD4-214ENST00000545942 AZI2Q9H6S1 392 aa25.94■■□□□ 1.74
CHD4-214ENST00000545942 MTCH2Q9Y6C9 303 aa25.94■■□□□ 1.74
CHD4-214ENST00000545942 PTPRSQ13332 1948 aa25.93■■□□□ 1.74
CHD4-214ENST00000545942 ESYT2A0FGR8 921 aa25.93■■□□□ 1.74
CHD4-214ENST00000545942 EPB41L2O43491 1005 aaKnown RBP25.93■■□□□ 1.74
CHD4-214ENST00000545942 FAM117BQ6P1L5 589 aa25.93■■□□□ 1.74
CHD4-214ENST00000545942 MYOCDQ8IZQ8 938 aa25.93■■□□□ 1.74
CHD4-214ENST00000545942 CCDC12Q8WUD4 166 aaPredicted RBP25.93■■□□□ 1.74
CHD4-214ENST00000545942 TSPYL2Q9H2G4 693 aaPredicted RBP25.93■■□□□ 1.74
CHD4-214ENST00000545942 AGO4Q9HCK5 861 aaKnown RBP25.93■■□□□ 1.74
CHD4-214ENST00000545942 TUBE1Q9UJT0 475 aa25.93■■□□□ 1.74
CHD4-214ENST00000545942 MEIS1O00470 390 aa25.92■■□□□ 1.74
CHD4-214ENST00000545942 NEFLP07196 543 aa25.92■■□□□ 1.74
CHD4-214ENST00000545942 ZNF76P36508 570 aa25.92■■□□□ 1.74
CHD4-214ENST00000545942 RUFY4Q6ZNE9 571 aa25.92■■□□□ 1.74
CHD4-214ENST00000545942 NIPA1Q7RTP0 329 aa25.92■■□□□ 1.74
CHD4-214ENST00000545942 SPRED2Q7Z698 418 aa25.92■■□□□ 1.74
CHD4-214ENST00000545942 RSPH3Q86UC2 560 aa25.92■■□□□ 1.74
CHD4-214ENST00000545942 APBB2Q92870 758 aa25.92■■□□□ 1.74
CHD4-214ENST00000545942 PCYT2Q99447 389 aa25.92■■□□□ 1.74
CHD4-214ENST00000545942 OSBPL7Q9BZF2 842 aa25.92■■□□□ 1.74
CHD4-214ENST00000545942 ZMYND12Q9H0C1 365 aa25.92■■□□□ 1.74
CHD4-214ENST00000545942 INSL6Q9Y581 213 aa25.92■■□□□ 1.74
CHD4-214ENST00000545942 MBLAC1A4D2B0 266 aaPredicted RBP25.91■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms