RNA–Protein interactions for RNA: ENST00000544913.2

HMGCS2-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 2 BASIC

Gene HMGCS2, Length 1,925 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-204ENST00000544913 KCTD2Q14681 263 aa7.86□□□□□ -1.15
HMGCS2-204ENST00000544913 IQCB1Q15051 598 aa7.86□□□□□ -1.15
HMGCS2-204ENST00000544913 KANK3Q6NY19 840 aa7.86□□□□□ -1.15
HMGCS2-204ENST00000544913 MAMDC4Q6UXC1 1216 aa7.86□□□□□ -1.15
HMGCS2-204ENST00000544913 CABP7Q86V35 215 aa7.86□□□□□ -1.15
HMGCS2-204ENST00000544913 DRC7Q8IY82 874 aa7.86□□□□□ -1.15
HMGCS2-204ENST00000544913 NPLOC4Q8TAT6 608 aa7.86□□□□□ -1.15
HMGCS2-204ENST00000544913 DHX58Q96C10 678 aa7.86□□□□□ -1.15
HMGCS2-204ENST00000544913 ZNF577Q9BSK1 485 aa7.86□□□□□ -1.15
HMGCS2-204ENST00000544913 DNAJC25Q9H1X3 360 aa7.86□□□□□ -1.15
HMGCS2-204ENST00000544913 LRWD1Q9UFC0 647 aa7.86□□□□□ -1.15
HMGCS2-204ENST00000544913 WDR81Q562E7 1941 aa7.85□□□□□ -1.15
HMGCS2-204ENST00000544913 LOC102724159A0A0B4J2E5 919 aa7.85□□□□□ -1.15
HMGCS2-204ENST00000544913 SLC15A5A6NIM6 579 aa7.85□□□□□ -1.15
HMGCS2-204ENST00000544913 STRNO43815 780 aa7.85□□□□□ -1.15
HMGCS2-204ENST00000544913 STAM2O75886 525 aa7.85□□□□□ -1.15
HMGCS2-204ENST00000544913 SNAI1O95863 264 aaPredicted RBP7.85□□□□□ -1.15
HMGCS2-204ENST00000544913 HOXC6P09630 235 aa7.85□□□□□ -1.15
HMGCS2-204ENST00000544913 BMP6P22004 513 aa7.85□□□□□ -1.15
HMGCS2-204ENST00000544913 CASP1P29466 404 aa7.85□□□□□ -1.15
HMGCS2-204ENST00000544913 ZNF76P36508 570 aa7.85□□□□□ -1.15
HMGCS2-204ENST00000544913 SARSP49591 514 aaKnown RBP7.85□□□□□ -1.15
HMGCS2-204ENST00000544913 NLRP12P59046 1061 aa7.85□□□□□ -1.15
HMGCS2-204ENST00000544913 PWP2Q15269 919 aaKnown RBP7.85□□□□□ -1.15
HMGCS2-204ENST00000544913 LRCH2Q5VUJ6 765 aa7.85□□□□□ -1.15
HMGCS2-204ENST00000544913 CCDC62Q6P9F0 684 aa7.85□□□□□ -1.15
HMGCS2-204ENST00000544913 PLEKHH3Q7Z736 793 aa7.85□□□□□ -1.15
HMGCS2-204ENST00000544913 ZNF467Q7Z7K2 595 aaPredicted RBP7.85□□□□□ -1.15
HMGCS2-204ENST00000544913 PAGE5Q96GU1 130 aa7.85□□□□□ -1.15
HMGCS2-204ENST00000544913 MAML3Q96JK9 1138 aa7.85□□□□□ -1.15
HMGCS2-204ENST00000544913 PLIN2Q99541 437 aa7.85□□□□□ -1.15
HMGCS2-204ENST00000544913 KBTBD4Q9NVX7 518 aa7.85□□□□□ -1.15
HMGCS2-204ENST00000544913 FAM13BQ9NYF5 915 aa7.85□□□□□ -1.15
HMGCS2-204ENST00000544913 FLRT1Q9NZU1 646 aa7.85□□□□□ -1.15
HMGCS2-204ENST00000544913 PKD2L1Q9P0L9 805 aa7.85□□□□□ -1.15
HMGCS2-204ENST00000544913 IMPACTQ9P2X3 320 aa7.85□□□□□ -1.15
HMGCS2-204ENST00000544913 TUBE1Q9UJT0 475 aa7.85□□□□□ -1.15
HMGCS2-204ENST00000544913 POTEB3A0JP26 581 aa7.84□□□□□ -1.15
HMGCS2-204ENST00000544913 IKBKBO14920 756 aa7.84□□□□□ -1.15
HMGCS2-204ENST00000544913 ADCY6O43306 1168 aa7.84□□□□□ -1.15
HMGCS2-204ENST00000544913 GAS7O60861 476 aa7.84□□□□□ -1.15
HMGCS2-204ENST00000544913 UBA1P22314 1058 aaKnown RBP7.84□□□□□ -1.15
HMGCS2-204ENST00000544913 GSDMDP57764 484 aa7.84□□□□□ -1.15
HMGCS2-204ENST00000544913 PNOCQ13519 176 aa7.84□□□□□ -1.15
HMGCS2-204ENST00000544913 STXBP2Q15833 593 aa7.84□□□□□ -1.15
HMGCS2-204ENST00000544913 UGCGQ16739 394 aa7.84□□□□□ -1.15
HMGCS2-204ENST00000544913 CT47A1Q5JQC4 288 aaPredicted RBP7.84□□□□□ -1.15
HMGCS2-204ENST00000544913 NT5DC1Q5TFE4 455 aa7.84□□□□□ -1.15
HMGCS2-204ENST00000544913 WDR78Q5VTH9 848 aa7.84□□□□□ -1.15
HMGCS2-204ENST00000544913 NCAPH2Q6IBW4 605 aa7.84□□□□□ -1.15
HMGCS2-204ENST00000544913 TAPT1Q6NXT6 567 aa7.84□□□□□ -1.15
HMGCS2-204ENST00000544913 POTEBQ6S5H4 581 aa7.84□□□□□ -1.15
HMGCS2-204ENST00000544913 POTEGQ6S5H5 508 aa7.84□□□□□ -1.15
HMGCS2-204ENST00000544913 PAXIP1Q6ZW49 1069 aaPredicted RBP7.84□□□□□ -1.15
HMGCS2-204ENST00000544913 ARMCX2Q7L311 632 aa7.84□□□□□ -1.15
HMGCS2-204ENST00000544913 CATSPER3Q86XQ3 398 aa7.84□□□□□ -1.15
HMGCS2-204ENST00000544913 FBXO16Q8IX29 292 aaPredicted RBP7.84□□□□□ -1.15
HMGCS2-204ENST00000544913 KIAA1524Q8TCG1 905 aa7.84□□□□□ -1.15
HMGCS2-204ENST00000544913 SNX29Q8TEQ0 813 aa7.84□□□□□ -1.15
HMGCS2-204ENST00000544913 TRIM47Q96LD4 638 aa7.84□□□□□ -1.15
HMGCS2-204ENST00000544913 ZFYVE28Q9HCC9 887 aa7.84□□□□□ -1.15
HMGCS2-204ENST00000544913 PDGFCQ9NRA1 345 aa7.84□□□□□ -1.15
HMGCS2-204ENST00000544913 RGL1Q9NZL6 768 aa7.84□□□□□ -1.15
HMGCS2-204ENST00000544913 ADD3Q9UEY8 706 aaKnown RBP7.84□□□□□ -1.15
HMGCS2-204ENST00000544913 DIS3Q9Y2L1 958 aaKnown RBP7.84□□□□□ -1.15
HMGCS2-204ENST00000544913 NFASCO94856 1347 aa7.84□□□□□ -1.15
HMGCS2-204ENST00000544913 BRCA2P51587 3418 aa7.84□□□□□ -1.15
HMGCS2-204ENST00000544913 RBM47A0AV96 593 aaKnown RBP7.84□□□□□ -1.16
HMGCS2-204ENST00000544913 NRDCO43847 1150 aa7.84□□□□□ -1.16
HMGCS2-204ENST00000544913 KLRC4O43908 158 aa7.84□□□□□ -1.16
HMGCS2-204ENST00000544913 SLITRK3O94933 977 aa7.84□□□□□ -1.16
HMGCS2-204ENST00000544913 STBD1O95210 358 aa7.84□□□□□ -1.16
HMGCS2-204ENST00000544913 RPA1P27694 616 aa7.84□□□□□ -1.16
HMGCS2-204ENST00000544913 MAP2K2P36507 400 aa7.84□□□□□ -1.16
HMGCS2-204ENST00000544913 UBA7P41226 1012 aa7.84□□□□□ -1.16
HMGCS2-204ENST00000544913 PSMC6P62333 389 aa7.84□□□□□ -1.16
HMGCS2-204ENST00000544913 DPYDQ12882 1025 aa7.84□□□□□ -1.16
HMGCS2-204ENST00000544913 MAP2K5Q13163 448 aa7.84□□□□□ -1.16
HMGCS2-204ENST00000544913 TMEM266Q2M3C6 531 aa7.84□□□□□ -1.16
HMGCS2-204ENST00000544913 DNTTIP2Q5QJE6 756 aaKnown RBP7.84□□□□□ -1.16
HMGCS2-204ENST00000544913 MTERF4Q7Z6M4 381 aaKnown RBP7.84□□□□□ -1.16
HMGCS2-204ENST00000544913 STAMQ92783 540 aa7.84□□□□□ -1.16
HMGCS2-204ENST00000544913 SENP7Q9BQF6 1050 aa7.84□□□□□ -1.16
HMGCS2-204ENST00000544913 EIF2AK1Q9BQI3 630 aaKnown RBP7.84□□□□□ -1.16
HMGCS2-204ENST00000544913 PYM1Q9BRP8 204 aaKnown RBP7.84□□□□□ -1.16
HMGCS2-204ENST00000544913 POLR3CQ9BUI4 534 aaPredicted RBP7.84□□□□□ -1.16
HMGCS2-204ENST00000544913 RNF186Q9NXI6 227 aa7.84□□□□□ -1.16
HMGCS2-204ENST00000544913 DDX39AO00148 427 aaKnown RBP7.83□□□□□ -1.16
HMGCS2-204ENST00000544913 DYNC1I1O14576 645 aa7.83□□□□□ -1.16
HMGCS2-204ENST00000544913 ZBTB39O15060 712 aa7.83□□□□□ -1.16
HMGCS2-204ENST00000544913 MAFGO15525 162 aa7.83□□□□□ -1.16
HMGCS2-204ENST00000544913 SLC26A4O43511 780 aa7.83□□□□□ -1.16
HMGCS2-204ENST00000544913 CHMP2AO43633 222 aa7.83□□□□□ -1.16
HMGCS2-204ENST00000544913 FARP2O94887 1054 aaPredicted RBP7.83□□□□□ -1.16
HMGCS2-204ENST00000544913 TBC1D8O95759 1140 aa7.83□□□□□ -1.16
HMGCS2-204ENST00000544913 ALDH1A1P00352 501 aa7.83□□□□□ -1.16
HMGCS2-204ENST00000544913 LACTBP83111 547 aaPredicted RBP7.83□□□□□ -1.16
HMGCS2-204ENST00000544913 CYP4A11Q02928 519 aa7.83□□□□□ -1.16
HMGCS2-204ENST00000544913 PDE4DQ08499 809 aa7.83□□□□□ -1.16
HMGCS2-204ENST00000544913 POSTNQ15063 836 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms