RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-222ENST00000544585 A0A1W2PPC1 479 aa7.58□□□□□ -1.2
CPSF7-222ENST00000544585 CLRN2A0PK11 232 aa7.58□□□□□ -1.2
CPSF7-222ENST00000544585 CTSBP07858 339 aa7.58□□□□□ -1.2
CPSF7-222ENST00000544585 CETPP11597 493 aa7.58□□□□□ -1.2
CPSF7-222ENST00000544585 MYCLP1P12525 358 aaPredicted RBP7.58□□□□□ -1.2
CPSF7-222ENST00000544585 IL1R1P14778 569 aa7.58□□□□□ -1.2
CPSF7-222ENST00000544585 CCNFP41002 786 aa7.58□□□□□ -1.2
CPSF7-222ENST00000544585 AFF1P51825 1210 aaKnown RBP7.58□□□□□ -1.2
CPSF7-222ENST00000544585 NLRP12P59046 1061 aa7.58□□□□□ -1.2
CPSF7-222ENST00000544585 LACTBP83111 547 aaPredicted RBP7.58□□□□□ -1.2
CPSF7-222ENST00000544585 CHRNDQ07001 517 aa7.58□□□□□ -1.2
CPSF7-222ENST00000544585 CCL15Q16663 113 aa7.58□□□□□ -1.2
CPSF7-222ENST00000544585 TM4SF20Q53R12 229 aa7.58□□□□□ -1.2
CPSF7-222ENST00000544585 ZC3H12AQ5D1E8 599 aaKnown RBP7.58□□□□□ -1.2
CPSF7-222ENST00000544585 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.58□□□□□ -1.2
CPSF7-222ENST00000544585 ZNF804AQ7Z570 1209 aa7.58□□□□□ -1.2
CPSF7-222ENST00000544585 CCDC146Q8IYE0 955 aa7.58□□□□□ -1.2
CPSF7-222ENST00000544585 PHACTR4Q8IZ21 702 aa7.58□□□□□ -1.2
CPSF7-222ENST00000544585 BRI3BPQ8WY22 251 aa7.58□□□□□ -1.2
CPSF7-222ENST00000544585 ACSF2Q96CM8 615 aaPredicted RBP7.58□□□□□ -1.2
CPSF7-222ENST00000544585 CDC6Q99741 560 aa7.58□□□□□ -1.2
CPSF7-222ENST00000544585 RAD18Q9NS91 495 aa7.58□□□□□ -1.2
CPSF7-222ENST00000544585 HOMER2Q9NSB8 354 aa7.58□□□□□ -1.2
CPSF7-222ENST00000544585 ANKRD18BA2A2Z9 1011 aa7.57□□□□□ -1.2
CPSF7-222ENST00000544585 F8W031 263 aaPredicted RBP7.57□□□□□ -1.2
CPSF7-222ENST00000544585 IGKV5-2P06315 115 aa7.57□□□□□ -1.2
CPSF7-222ENST00000544585 ZNF143P52747 638 aaPredicted RBP7.57□□□□□ -1.2
CPSF7-222ENST00000544585 CAP1Q01518 475 aa7.57□□□□□ -1.2
CPSF7-222ENST00000544585 PABPC4Q13310 644 aaKnown RBP eCLIP7.57□□□□□ -1.2
CPSF7-222ENST00000544585 GAS6Q14393 721 aa7.57□□□□□ -1.2
CPSF7-222ENST00000544585 WDR43Q15061 677 aaKnown RBP eCLIP7.57□□□□□ -1.2
CPSF7-222ENST00000544585 C20orf204Q6ZNR8 217 aa7.57□□□□□ -1.2
CPSF7-222ENST00000544585 ERO1BQ86YB8 467 aa7.57□□□□□ -1.2
CPSF7-222ENST00000544585 CERS5Q8N5B7 392 aa7.57□□□□□ -1.2
CPSF7-222ENST00000544585 HOOK2Q96ED9 719 aa7.57□□□□□ -1.2
CPSF7-222ENST00000544585 ZNF70Q9UC06 446 aaPredicted RBP7.57□□□□□ -1.2
CPSF7-222ENST00000544585 GDF2Q9UK05 429 aaPredicted RBP7.57□□□□□ -1.2
CPSF7-222ENST00000544585 ADAMTS8Q9UP79 889 aa7.57□□□□□ -1.2
CPSF7-222ENST00000544585 HIF3AQ9Y2N7 669 aa7.57□□□□□ -1.2
CPSF7-222ENST00000544585 STARD13Q9Y3M8 1113 aa7.57□□□□□ -1.2
CPSF7-222ENST00000544585 RFPL3O75679 317 aa7.56□□□□□ -1.2
CPSF7-222ENST00000544585 ALBP02768 609 aa7.56□□□□□ -1.2
CPSF7-222ENST00000544585 GJB1P08034 283 aa7.56□□□□□ -1.2
CPSF7-222ENST00000544585 POLR2BP30876 1174 aaKnown RBP7.56□□□□□ -1.2
CPSF7-222ENST00000544585 SOX5P35711 763 aa7.56□□□□□ -1.2
CPSF7-222ENST00000544585 UBXN2AP68543 259 aa7.56□□□□□ -1.2
CPSF7-222ENST00000544585 SNAPC2Q13487 334 aa7.56□□□□□ -1.2
CPSF7-222ENST00000544585 C17orf99Q6UX52 265 aa7.56□□□□□ -1.2
CPSF7-222ENST00000544585 SLCO4C1Q6ZQN7 724 aa7.56□□□□□ -1.2
CPSF7-222ENST00000544585 UBE3BQ7Z3V4 1068 aa7.56□□□□□ -1.2
CPSF7-222ENST00000544585 MCATQ8IVS2 390 aaKnown RBP7.56□□□□□ -1.2
CPSF7-222ENST00000544585 FAM43AQ8N2R8 423 aa7.56□□□□□ -1.2
CPSF7-222ENST00000544585 C8orf58Q8NAV2 365 aa7.56□□□□□ -1.2
CPSF7-222ENST00000544585 KIF2CQ99661 725 aa7.56□□□□□ -1.2
CPSF7-222ENST00000544585 WDR18Q9BV38 432 aa7.56□□□□□ -1.2
CPSF7-222ENST00000544585 MRIQ9BWK5 157 aa7.56□□□□□ -1.2
CPSF7-222ENST00000544585 STK31Q9BXU1 1019 aa7.56□□□□□ -1.2
CPSF7-222ENST00000544585 CAAP1Q9H8G2 361 aa7.56□□□□□ -1.2
CPSF7-222ENST00000544585 LRP2BPQ9P2M1 347 aa7.56□□□□□ -1.2
CPSF7-222ENST00000544585 ATP8A1Q9Y2Q0 1164 aa7.56□□□□□ -1.2
CPSF7-222ENST00000544585 TRIOBPQ9H2D6 2365 aa7.55□□□□□ -1.2
CPSF7-222ENST00000544585 PSME4Q14997 1843 aa7.55□□□□□ -1.2
CPSF7-222ENST00000544585 COL4A1P02462 1669 aa7.55□□□□□ -1.2
CPSF7-222ENST00000544585 LOC100289279A0A1B0GTE1 492 aa7.55□□□□□ -1.2
CPSF7-222ENST00000544585 ANKRD34BA5PLL1 514 aa7.55□□□□□ -1.2
CPSF7-222ENST00000544585 BTBD19C9JJ37 291 aa7.55□□□□□ -1.2
CPSF7-222ENST00000544585 FANCGO15287 622 aa7.55□□□□□ -1.2
CPSF7-222ENST00000544585 TAF5LO75529 589 aa7.55□□□□□ -1.2
CPSF7-222ENST00000544585 KLRK1P26718 216 aa7.55□□□□□ -1.2
CPSF7-222ENST00000544585 L1CAMP32004 1257 aa7.55□□□□□ -1.2
CPSF7-222ENST00000544585 STAT3P40763 770 aa7.55□□□□□ -1.2
CPSF7-222ENST00000544585 PSMC4P43686 418 aa7.55□□□□□ -1.2
CPSF7-222ENST00000544585 ERVK-24P63145 666 aa7.55□□□□□ -1.2
CPSF7-222ENST00000544585 ID3Q02535 119 aa7.55□□□□□ -1.2
CPSF7-222ENST00000544585 IFIT5Q13325 482 aaKnown RBP7.55□□□□□ -1.2
CPSF7-222ENST00000544585 GCKRQ14397 625 aa7.55□□□□□ -1.2
CPSF7-222ENST00000544585 HSP90AA2PQ14568 343 aaPredicted RBP7.55□□□□□ -1.2
CPSF7-222ENST00000544585 PPM1JQ5JR12 505 aa7.55□□□□□ -1.2
CPSF7-222ENST00000544585 ODR4Q5SWX8 454 aa7.55□□□□□ -1.2
CPSF7-222ENST00000544585 THNSL2Q86YJ6 484 aa7.55□□□□□ -1.2
CPSF7-222ENST00000544585 MAP4K3Q8IVH8 894 aa7.55□□□□□ -1.2
CPSF7-222ENST00000544585 SLFN12Q8IYM2 578 aa7.55□□□□□ -1.2
CPSF7-222ENST00000544585 DZIP1LQ8IYY4 767 aaKnown RBP7.55□□□□□ -1.2
CPSF7-222ENST00000544585 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.55□□□□□ -1.2
CPSF7-222ENST00000544585 RAET1EQ8TD07 263 aa7.55□□□□□ -1.2
CPSF7-222ENST00000544585 PPP1R14AQ96A00 147 aa7.55□□□□□ -1.2
CPSF7-222ENST00000544585 TEPSINQ96N21 525 aa7.55□□□□□ -1.2
CPSF7-222ENST00000544585 SLC6A18Q96N87 628 aa7.55□□□□□ -1.2
CPSF7-222ENST00000544585 APBA2Q99767 749 aa7.55□□□□□ -1.2
CPSF7-222ENST00000544585 DHRS4Q9BTZ2 278 aa7.55□□□□□ -1.2
CPSF7-222ENST00000544585 RNF208Q9H0X6 261 aa7.55□□□□□ -1.2
CPSF7-222ENST00000544585 PRO3102Q9H379 93 aa7.55□□□□□ -1.2
CPSF7-222ENST00000544585 MYH16Q9H6N6 1097 aa7.55□□□□□ -1.2
CPSF7-222ENST00000544585 TDRD3Q9H7E2 651 aaKnown RBP7.55□□□□□ -1.2
CPSF7-222ENST00000544585 NCOA5Q9HCD5 579 aaKnown RBP7.55□□□□□ -1.2
CPSF7-222ENST00000544585 FAM86C1Q9NVL1 165 aa7.55□□□□□ -1.2
CPSF7-222ENST00000544585 SRRDQ9UH36 339 aa7.55□□□□□ -1.2
CPSF7-222ENST00000544585 PCDHAC2Q9Y5I4 1007 aa7.55□□□□□ -1.2
CPSF7-222ENST00000544585 FAM205AQ6ZU69 1335 aa7.54□□□□□ -1.2
CPSF7-222ENST00000544585 TRAV20A0A0B4J274 112 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms