RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 MAPK4P31152 587 aa34.04■■■■□ 3.04
CCM2-219ENST00000544363 KRT76Q01546 638 aa34.04■■■■□ 3.04
CCM2-219ENST00000544363 NEK9Q8TD19 979 aa34.04■■■■□ 3.04
CCM2-219ENST00000544363 BPIFA3Q9BQP9 254 aa34.04■■■■□ 3.04
CCM2-219ENST00000544363 NFASCO94856 1347 aa34.04■■■■□ 3.04
CCM2-219ENST00000544363 PLXNB2O15031 1838 aa34.03■■■■□ 3.04
CCM2-219ENST00000544363 PLA2G4BP0C869 781 aa34.03■■■■□ 3.04
CCM2-219ENST00000544363 CTTNQ14247 550 aaKnown RBP34.03■■■■□ 3.04
CCM2-219ENST00000544363 IQCB1Q15051 598 aa34.03■■■■□ 3.04
CCM2-219ENST00000544363 GPR142Q7Z601 462 aa34.03■■■■□ 3.04
CCM2-219ENST00000544363 LUZP1Q86V48 1076 aa34.03■■■■□ 3.04
CCM2-219ENST00000544363 MLKLQ8NB16 471 aa34.03■■■■□ 3.04
CCM2-219ENST00000544363 TCEAL9Q9UHQ7 104 aa34.03■■■■□ 3.04
CCM2-219ENST00000544363 MYMKA6NI61 221 aa34.02■■■■□ 3.04
CCM2-219ENST00000544363 ADORA2AP29274 412 aa34.02■■■■□ 3.04
CCM2-219ENST00000544363 TM4SF4P48230 202 aa34.02■■■■□ 3.04
CCM2-219ENST00000544363 TPH2Q8IWU9 490 aa34.02■■■■□ 3.04
CCM2-219ENST00000544363 KLRC4O43908 158 aa34.01■■■■□ 3.04
CCM2-219ENST00000544363 KCNB1Q14721 858 aa34.01■■■■□ 3.04
CCM2-219ENST00000544363 ZNF792Q3KQV3 632 aa34.01■■■■□ 3.04
CCM2-219ENST00000544363 CNNM4Q6P4Q7 775 aa34.01■■■■□ 3.04
CCM2-219ENST00000544363 SEPT14Q6ZU15 432 aa34.01■■■■□ 3.04
CCM2-219ENST00000544363 PAXIP1Q6ZW49 1069 aaPredicted RBP34.01■■■■□ 3.04
CCM2-219ENST00000544363 MORC4Q8TE76 937 aa34.01■■■■□ 3.04
CCM2-219ENST00000544363 LRRC37A2A6NM11 1700 aa34.01■■■■□ 3.03
CCM2-219ENST00000544363 SFNP31947 248 aa34.01■■■■□ 3.03
CCM2-219ENST00000544363 JAK3P52333 1124 aa34.01■■■■□ 3.03
CCM2-219ENST00000544363 PSMC6P62333 389 aa34.01■■■■□ 3.03
CCM2-219ENST00000544363 ZNF746Q6NUN9 644 aaPredicted RBP34.01■■■■□ 3.03
CCM2-219ENST00000544363 PLEKHH3Q7Z736 793 aa34.01■■■■□ 3.03
CCM2-219ENST00000544363 SENP7Q9BQF6 1050 aa34.01■■■■□ 3.03
CCM2-219ENST00000544363 DACH1Q9UI36 760 aa34.01■■■■□ 3.03
CCM2-219ENST00000544363 TLR2O60603 784 aa34■■■■□ 3.03
CCM2-219ENST00000544363 ASIC1P78348 528 aa34■■■■□ 3.03
CCM2-219ENST00000544363 CYP4F22Q6NT55 531 aa34■■■■□ 3.03
CCM2-219ENST00000544363 RDM1Q8NG50 284 aa34■■■■□ 3.03
CCM2-219ENST00000544363 ZIC5Q96T25 663 aa34■■■■□ 3.03
CCM2-219ENST00000544363 ZFYVE28Q9HCC9 887 aa34■■■■□ 3.03
CCM2-219ENST00000544363 SAMM50Q9Y512 469 aa34■■■■□ 3.03
CCM2-219ENST00000544363 ASB14A6NK59 587 aa33.99■■■■□ 3.03
CCM2-219ENST00000544363 WDR64B1ANS9 1081 aa33.99■■■■□ 3.03
CCM2-219ENST00000544363 COBLO75128 1261 aa33.99■■■■□ 3.03
CCM2-219ENST00000544363 CCNE2O96020 404 aa33.99■■■■□ 3.03
CCM2-219ENST00000544363 P4HBP07237 508 aaKnown RBP33.99■■■■□ 3.03
CCM2-219ENST00000544363 SLC12A3P55017 1021 aa33.99■■■■□ 3.03
CCM2-219ENST00000544363 KMT5BQ4FZB7 885 aa33.99■■■■□ 3.03
CCM2-219ENST00000544363 C17orf99Q6UX52 265 aa33.99■■■■□ 3.03
CCM2-219ENST00000544363 SSBP05455 408 aaKnown RBP eCLIP33.98■■■■□ 3.03
CCM2-219ENST00000544363 GRM1Q13255 1194 aa33.98■■■■□ 3.03
CCM2-219ENST00000544363 GRB14Q14449 540 aa33.98■■■■□ 3.03
CCM2-219ENST00000544363 DHX40Q8IX18 779 aaKnown RBP33.98■■■■□ 3.03
CCM2-219ENST00000544363 SYT2Q8N9I0 419 aaPredicted RBP33.98■■■■□ 3.03
CCM2-219ENST00000544363 ZNF784Q8NCA9 323 aaPredicted RBP33.98■■■■□ 3.03
CCM2-219ENST00000544363 CCDC47Q96A33 483 aaKnown RBP33.98■■■■□ 3.03
CCM2-219ENST00000544363 LXNQ9BS40 222 aa33.98■■■■□ 3.03
CCM2-219ENST00000544363 RHOBTB3O94955 611 aa33.97■■■■□ 3.03
CCM2-219ENST00000544363 EYA4O95677 639 aa33.97■■■■□ 3.03
CCM2-219ENST00000544363 YY1P25490 414 aa33.97■■■■□ 3.03
CCM2-219ENST00000544363 ZNF658Q5TYW1 1059 aaPredicted RBP33.97■■■■□ 3.03
CCM2-219ENST00000544363 BANK1Q8NDB2 785 aa33.97■■■■□ 3.03
CCM2-219ENST00000544363 DDX12PQ92771 950 aa33.97■■■■□ 3.03
CCM2-219ENST00000544363 JPH1Q9HDC5 661 aaPredicted RBP33.97■■■■□ 3.03
CCM2-219ENST00000544363 BECN2A8MW95 431 aa33.97■■■■□ 3.03
CCM2-219ENST00000544363 SP2Q02086 613 aa33.97■■■■□ 3.03
CCM2-219ENST00000544363 NACC1Q96RE7 527 aa33.97■■■■□ 3.03
CCM2-219ENST00000544363 BMP2KQ9NSY1 1161 aaPredicted RBP33.97■■■■□ 3.03
CCM2-219ENST00000544363 WRAP73Q9P2S5 460 aaPredicted RBP33.97■■■■□ 3.03
CCM2-219ENST00000544363 SLC9A2Q9UBY0 812 aa33.97■■■■□ 3.03
CCM2-219ENST00000544363 PVALEFA0A1B0GWK0 134 aa33.96■■■■□ 3.03
CCM2-219ENST00000544363 TGFB3P10600 412 aa33.96■■■■□ 3.03
CCM2-219ENST00000544363 CT47A1Q5JQC4 288 aaPredicted RBP33.96■■■■□ 3.03
CCM2-219ENST00000544363 DYMQ7RTS9 669 aa33.96■■■■□ 3.03
CCM2-219ENST00000544363 GPBP1Q86WP2 473 aa33.96■■■■□ 3.03
CCM2-219ENST00000544363 SMAP1Q8IYB5 467 aaPredicted RBP33.96■■■■□ 3.03
CCM2-219ENST00000544363 AOPEPQ8N6M6 819 aa33.96■■■■□ 3.03
CCM2-219ENST00000544363 BCAS3Q9H6U6 928 aa33.96■■■■□ 3.03
CCM2-219ENST00000544363 ZSWIM4Q9H7M6 989 aa33.96■■■■□ 3.03
CCM2-219ENST00000544363 UNC13DQ70J99 1090 aa33.95■■■■□ 3.03
CCM2-219ENST00000544363 EEPD1Q7L9B9 569 aa33.95■■■■□ 3.03
CCM2-219ENST00000544363 ZNF467Q7Z7K2 595 aaPredicted RBP33.95■■■■□ 3.03
CCM2-219ENST00000544363 PCDHA10Q9Y5I2 948 aa33.95■■■■□ 3.03
CCM2-219ENST00000544363 PLXNA1Q9UIW2 1896 aa33.95■■■■□ 3.03
CCM2-219ENST00000544363 SLC15A5A6NIM6 579 aa33.94■■■■□ 3.02
CCM2-219ENST00000544363 GOLGA6L19H0YKK7 550 aa33.94■■■■□ 3.02
CCM2-219ENST00000544363 CYP11B2P19099 503 aa33.94■■■■□ 3.02
CCM2-219ENST00000544363 QARSP47897 775 aaKnown RBP33.94■■■■□ 3.02
CCM2-219ENST00000544363 NOGQ13253 232 aa33.94■■■■□ 3.02
CCM2-219ENST00000544363 PIGOQ8TEQ8 1089 aa33.94■■■■□ 3.02
CCM2-219ENST00000544363 DNAJC19Q96DA6 116 aa33.94■■■■□ 3.02
CCM2-219ENST00000544363 BHMT2Q9H2M3 363 aa33.94■■■■□ 3.02
CCM2-219ENST00000544363 CREBZFQ9NS37 354 aa33.94■■■■□ 3.02
CCM2-219ENST00000544363 EXOC1Q9NV70 894 aa33.94■■■■□ 3.02
CCM2-219ENST00000544363 CRHR2Q13324 411 aa33.93■■■■□ 3.02
CCM2-219ENST00000544363 DEFB115Q30KQ5 88 aa33.93■■■■□ 3.02
CCM2-219ENST00000544363 KCNV1Q6PIU1 500 aa33.93■■■■□ 3.02
CCM2-219ENST00000544363 DPP9Q86TI2 863 aa33.93■■■■□ 3.02
CCM2-219ENST00000544363 GIMAP8Q8ND71 665 aaPredicted RBP33.93■■■■□ 3.02
CCM2-219ENST00000544363 DIS3Q9Y2L1 958 aaKnown RBP33.93■■■■□ 3.02
CCM2-219ENST00000544363 RASSF10A6NK89 507 aa33.93■■■■□ 3.02
CCM2-219ENST00000544363 SMTNL1A8MU46 457 aa33.93■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms