RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 HERVK_113P62684 666 aa22.09■■□□□ 1.13
COPS7A-218ENST00000543939 FILIP1Q7Z7B0 1213 aa22.09■■□□□ 1.13
COPS7A-218ENST00000543939 CCDC65Q8IXS2 484 aa22.09■■□□□ 1.13
COPS7A-218ENST00000543939 PKD2L1Q9P0L9 805 aa22.09■■□□□ 1.13
COPS7A-218ENST00000543939 NPHP3-ACAD11A0A0J9YXS1 232 aa22.09■■□□□ 1.13
COPS7A-218ENST00000543939 A0A1B0GTH6 734 aa22.09■■□□□ 1.13
COPS7A-218ENST00000543939 FRMD3A2A2Y4 597 aa22.09■■□□□ 1.13
COPS7A-218ENST00000543939 PEX10O60683 326 aa22.09■■□□□ 1.13
COPS7A-218ENST00000543939 GPAT2Q6NUI2 795 aa22.09■■□□□ 1.13
COPS7A-218ENST00000543939 VSTM4Q8IW00 320 aa22.09■■□□□ 1.13
COPS7A-218ENST00000543939 TPH2Q8IWU9 490 aa22.09■■□□□ 1.13
COPS7A-218ENST00000543939 GUF1Q8N442 669 aaKnown RBP22.09■■□□□ 1.13
COPS7A-218ENST00000543939 NEK9Q8TD19 979 aa22.09■■□□□ 1.13
COPS7A-218ENST00000543939 CACTINQ8WUQ7 758 aaKnown RBP22.09■■□□□ 1.13
COPS7A-218ENST00000543939 SLC10A4Q96EP9 437 aa22.09■■□□□ 1.13
COPS7A-218ENST00000543939 SPATC1LQ9H0A9 340 aa22.09■■□□□ 1.13
COPS7A-218ENST00000543939 TBC1D22BQ9NU19 505 aa22.09■■□□□ 1.13
COPS7A-218ENST00000543939 FBXO40Q9UH90 709 aa22.09■■□□□ 1.13
COPS7A-218ENST00000543939 BICDL2A1A5D9 508 aa22.08■■□□□ 1.12
COPS7A-218ENST00000543939 DDX39AO00148 427 aaKnown RBP22.08■■□□□ 1.12
COPS7A-218ENST00000543939 CNMDO75829 334 aa22.08■■□□□ 1.12
COPS7A-218ENST00000543939 SPAG1Q07617 926 aa22.08■■□□□ 1.12
COPS7A-218ENST00000543939 NR1I3Q14994 352 aa22.08■■□□□ 1.12
COPS7A-218ENST00000543939 GPRASP2Q96D09 838 aa22.08■■□□□ 1.12
COPS7A-218ENST00000543939 DUSP9Q99956 384 aaKnown RBP22.08■■□□□ 1.12
COPS7A-218ENST00000543939 BHMT2Q9H2M3 363 aa22.08■■□□□ 1.12
COPS7A-218ENST00000543939 LIMA1Q9UHB6 759 aaKnown RBP22.08■■□□□ 1.12
COPS7A-218ENST00000543939 TESPA1A2RU30 521 aaPredicted RBP22.07■■□□□ 1.12
COPS7A-218ENST00000543939 ZNF500O60304 480 aaPredicted RBP22.07■■□□□ 1.12
COPS7A-218ENST00000543939 GSDMDP57764 484 aa22.07■■□□□ 1.12
COPS7A-218ENST00000543939 GIT2Q14161 759 aa22.07■■□□□ 1.12
COPS7A-218ENST00000543939 MIER3Q7Z3K6 550 aa22.07■■□□□ 1.12
COPS7A-218ENST00000543939 IRF2BP1Q8IU81 584 aa22.07■■□□□ 1.12
COPS7A-218ENST00000543939 TRIM47Q96LD4 638 aa22.07■■□□□ 1.12
COPS7A-218ENST00000543939 INPP4AQ96PE3 977 aaPredicted RBP22.07■■□□□ 1.12
COPS7A-218ENST00000543939 CTAGE1Q96RT6 745 aa22.07■■□□□ 1.12
COPS7A-218ENST00000543939 ZNF408Q9H9D4 720 aa22.07■■□□□ 1.12
COPS7A-218ENST00000543939 RRAGCQ9HB90 399 aa22.07■■□□□ 1.12
COPS7A-218ENST00000543939 ADD3Q9UEY8 706 aaKnown RBP22.07■■□□□ 1.12
COPS7A-218ENST00000543939 PCDHA2Q9Y5H9 948 aa22.07■■□□□ 1.12
COPS7A-218ENST00000543939 LRRC10BA6NIK2 292 aa22.06■■□□□ 1.12
COPS7A-218ENST00000543939 KRT18P05783 430 aaKnown RBP22.06■■□□□ 1.12
COPS7A-218ENST00000543939 SNAPC2Q13487 334 aa22.06■■□□□ 1.12
COPS7A-218ENST00000543939 FAM26FQ5R3K3 315 aa22.06■■□□□ 1.12
COPS7A-218ENST00000543939 ANKRD40Q6AI12 368 aa22.06■■□□□ 1.12
COPS7A-218ENST00000543939 CENPPQ6IPU0 288 aa22.06■■□□□ 1.12
COPS7A-218ENST00000543939 LRRC8AQ8IWT6 810 aa22.06■■□□□ 1.12
COPS7A-218ENST00000543939 NOC3LQ8WTT2 800 aaKnown RBP22.06■■□□□ 1.12
COPS7A-218ENST00000543939 SEMA6BQ9H3T3 888 aa22.06■■□□□ 1.12
COPS7A-218ENST00000543939 THAP9Q9H5L6 903 aa22.06■■□□□ 1.12
COPS7A-218ENST00000543939 WRAP73Q9P2S5 460 aaPredicted RBP22.06■■□□□ 1.12
COPS7A-218ENST00000543939 PFASO15067 1338 aa22.06■■□□□ 1.12
COPS7A-218ENST00000543939 MAFGO15525 162 aa22.06■■□□□ 1.12
COPS7A-218ENST00000543939 ATP9AO75110 1047 aa22.06■■□□□ 1.12
COPS7A-218ENST00000543939 OSBPP22059 807 aa22.06■■□□□ 1.12
COPS7A-218ENST00000543939 CLCN1P35523 988 aa22.06■■□□□ 1.12
COPS7A-218ENST00000543939 CACNB1Q02641 598 aaPredicted RBP22.06■■□□□ 1.12
COPS7A-218ENST00000543939 LRMPQ12912 555 aa22.06■■□□□ 1.12
COPS7A-218ENST00000543939 ARID5BQ14865 1188 aa22.06■■□□□ 1.12
COPS7A-218ENST00000543939 KRT31Q15323 416 aa22.06■■□□□ 1.12
COPS7A-218ENST00000543939 TCP11X2Q5H9J9 407 aa22.06■■□□□ 1.12
COPS7A-218ENST00000543939 NLRX1Q86UT6 975 aa22.06■■□□□ 1.12
COPS7A-218ENST00000543939 DNERQ8NFT8 737 aa22.06■■□□□ 1.12
COPS7A-218ENST00000543939 PIGOQ8TEQ8 1089 aa22.06■■□□□ 1.12
COPS7A-218ENST00000543939 NACC1Q96RE7 527 aa22.06■■□□□ 1.12
COPS7A-218ENST00000543939 LXNQ9BS40 222 aa22.06■■□□□ 1.12
COPS7A-218ENST00000543939 KCNJ18B7U540 433 aa22.05■■□□□ 1.12
COPS7A-218ENST00000543939 STAM2O75886 525 aa22.05■■□□□ 1.12
COPS7A-218ENST00000543939 FKBP1BP68106 108 aa22.05■■□□□ 1.12
COPS7A-218ENST00000543939 KCNJ12Q14500 433 aa22.05■■□□□ 1.12
COPS7A-218ENST00000543939 ANKRD35Q8N283 1001 aa22.05■■□□□ 1.12
COPS7A-218ENST00000543939 GLIS3Q8NEA6 775 aa22.05■■□□□ 1.12
COPS7A-218ENST00000543939 IWS1Q96ST2 819 aa22.05■■□□□ 1.12
COPS7A-218ENST00000543939 REEP2Q9BRK0 252 aa22.05■■□□□ 1.12
COPS7A-218ENST00000543939 PAGR1Q9BTK6 254 aa22.05■■□□□ 1.12
COPS7A-218ENST00000543939 RUSC1Q9BVN2 902 aa22.05■■□□□ 1.12
COPS7A-218ENST00000543939 SRRTQ9BXP5 876 aaKnown RBP22.05■■□□□ 1.12
COPS7A-218ENST00000543939 MOV10L1Q9BXT6 1211 aaKnown RBP22.05■■□□□ 1.12
COPS7A-218ENST00000543939 WDR81Q562E7 1941 aa22.04■■□□□ 1.12
COPS7A-218ENST00000543939 RGS20O76081 388 aa22.04■■□□□ 1.12
COPS7A-218ENST00000543939 P4HBP07237 508 aaKnown RBP22.04■■□□□ 1.12
COPS7A-218ENST00000543939 RAD51AP2Q09MP3 1159 aa22.04■■□□□ 1.12
COPS7A-218ENST00000543939 HERC4Q5GLZ8 1057 aaPredicted RBP22.04■■□□□ 1.12
COPS7A-218ENST00000543939 RINT1Q6NUQ1 792 aa22.04■■□□□ 1.12
COPS7A-218ENST00000543939 BANK1Q8NDB2 785 aa22.04■■□□□ 1.12
COPS7A-218ENST00000543939 RTN4Q9NQC3 1192 aaKnown RBP22.04■■□□□ 1.12
COPS7A-218ENST00000543939 RBPJLQ9UBG7 517 aa22.04■■□□□ 1.12
COPS7A-218ENST00000543939 PYCARDQ9ULZ3 195 aa22.04■■□□□ 1.12
COPS7A-218ENST00000543939 ASTN1O14525 1302 aa22.03■■□□□ 1.12
COPS7A-218ENST00000543939 ZBTB39O15060 712 aa22.03■■□□□ 1.12
COPS7A-218ENST00000543939 LRRC41Q15345 812 aa22.03■■□□□ 1.12
COPS7A-218ENST00000543939 FOXR2Q6PJQ5 311 aa22.03■■□□□ 1.12
COPS7A-218ENST00000543939 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.03■■□□□ 1.12
COPS7A-218ENST00000543939 NCAPG2Q86XI2 1143 aa22.03■■□□□ 1.12
COPS7A-218ENST00000543939 MYOCDQ8IZQ8 938 aa22.03■■□□□ 1.12
COPS7A-218ENST00000543939 CSGALNACT2Q8N6G5 542 aa22.03■■□□□ 1.12
COPS7A-218ENST00000543939 TXNRD2Q9NNW7 524 aa22.03■■□□□ 1.12
COPS7A-218ENST00000543939 TEX33O43247 280 aa22.03■■□□□ 1.12
COPS7A-218ENST00000543939 SLC25A27O95847 323 aa22.03■■□□□ 1.12
COPS7A-218ENST00000543939 EEF1GP26641 437 aaKnown RBP22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 288.5 ms