RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 VAV3Q9UKW4 847 aa15.4■□□□□ 0.06
MSH2-206ENST00000543555 ZNRF3Q9ULT6 936 aa15.4■□□□□ 0.06
MSH2-206ENST00000543555 DNM3Q9UQ16 869 aa15.4■□□□□ 0.06
MSH2-206ENST00000543555 RCCD1A6NED2 376 aa15.39■□□□□ 0.05
MSH2-206ENST00000543555 TFRCP02786 760 aaKnown RBP15.39■□□□□ 0.05
MSH2-206ENST00000543555 PSMC6P62333 389 aa15.39■□□□□ 0.05
MSH2-206ENST00000543555 OGFOD1Q8N543 542 aa15.39■□□□□ 0.05
MSH2-206ENST00000543555 SYT2Q8N9I0 419 aaPredicted RBP15.39■□□□□ 0.05
MSH2-206ENST00000543555 LACRTQ9GZZ8 138 aa15.39■□□□□ 0.05
MSH2-206ENST00000543555 MEIS1O00470 390 aa15.39■□□□□ 0.05
MSH2-206ENST00000543555 GNA14O95837 355 aa15.39■□□□□ 0.05
MSH2-206ENST00000543555 ZNF76P36508 570 aa15.39■□□□□ 0.05
MSH2-206ENST00000543555 TUBB4BP68371 445 aa15.39■□□□□ 0.05
MSH2-206ENST00000543555 SPDYE2Q495Y8 402 aa15.39■□□□□ 0.05
MSH2-206ENST00000543555 FAM83BQ5T0W9 1011 aa15.39■□□□□ 0.05
MSH2-206ENST00000543555 TEX2Q8IWB9 1127 aa15.39■□□□□ 0.05
MSH2-206ENST00000543555 CYP2W1Q8TAV3 490 aa15.39■□□□□ 0.05
MSH2-206ENST00000543555 TANGO6Q9C0B7 1094 aa15.39■□□□□ 0.05
MSH2-206ENST00000543555 ZHX3Q9H4I2 956 aa15.39■□□□□ 0.05
MSH2-206ENST00000543555 ARHGAP20Q9P2F6 1191 aa15.39■□□□□ 0.05
MSH2-206ENST00000543555 SEC31AO94979 1220 aaKnown RBP15.38■□□□□ 0.05
MSH2-206ENST00000543555 PLEKP08567 350 aaPredicted RBP15.38■□□□□ 0.05
MSH2-206ENST00000543555 MARSP56192 900 aaKnown RBP15.38■□□□□ 0.05
MSH2-206ENST00000543555 PABPC4Q13310 644 aaKnown RBP eCLIP15.38■□□□□ 0.053e-13■□□□□ 10.3
MSH2-206ENST00000543555 GIT2Q14161 759 aa15.38■□□□□ 0.05
MSH2-206ENST00000543555 CC2D1AQ6P1N0 951 aaPredicted RBP15.38■□□□□ 0.05
MSH2-206ENST00000543555 KIF13BQ9NQT8 1826 aa15.38■□□□□ 0.05
MSH2-206ENST00000543555 ZNF263O14978 683 aa15.38■□□□□ 0.05
MSH2-206ENST00000543555 VAV2P52735 878 aa15.38■□□□□ 0.05
MSH2-206ENST00000543555 CYP27A1Q02318 531 aa15.38■□□□□ 0.05
MSH2-206ENST00000543555 KCNMA1Q12791 1236 aa15.38■□□□□ 0.05
MSH2-206ENST00000543555 TRAPPC11Q7Z392 1133 aa15.38■□□□□ 0.05
MSH2-206ENST00000543555 ZC3H3Q8IXZ2 948 aaKnown RBP15.38■□□□□ 0.05
MSH2-206ENST00000543555 CCDC155Q8N6L0 562 aa15.38■□□□□ 0.05
MSH2-206ENST00000543555 NEK11Q8NG66 645 aa15.38■□□□□ 0.05
MSH2-206ENST00000543555 BAP1Q92560 729 aa15.38■□□□□ 0.05
MSH2-206ENST00000543555 EDEM3Q9BZQ6 932 aa15.38■□□□□ 0.05
MSH2-206ENST00000543555 IGLV3-22A0A075B6J6 115 aa15.38■□□□□ 0.05
MSH2-206ENST00000543555 CTAGE15A4D2H0 777 aa15.38■□□□□ 0.05
MSH2-206ENST00000543555 LRRC53A6NM62 1247 aa15.38■□□□□ 0.05
MSH2-206ENST00000543555 CTAGE8P0CG41 777 aa15.38■□□□□ 0.05
MSH2-206ENST00000543555 SPA17Q15506 151 aa15.38■□□□□ 0.05
MSH2-206ENST00000543555 RRAGAQ7L523 313 aa15.38■□□□□ 0.05
MSH2-206ENST00000543555 CTAGE6Q86UF2 777 aa15.38■□□□□ 0.05
MSH2-206ENST00000543555 TRIM59Q8IWR1 403 aa15.38■□□□□ 0.05
MSH2-206ENST00000543555 CTAGE4Q8IX94 777 aa15.38■□□□□ 0.05
MSH2-206ENST00000543555 SMCR8Q8TEV9 937 aaPredicted RBP15.38■□□□□ 0.05
MSH2-206ENST00000543555 ATP8B1O43520 1251 aa15.37■□□□□ 0.05
MSH2-206ENST00000543555 EDRF1Q3B7T1 1238 aa15.37■□□□□ 0.05
MSH2-206ENST00000543555 PPP4R3CPQ6ZMV5 832 aa15.37■□□□□ 0.05
MSH2-206ENST00000543555 PURBQ96QR8 312 aaKnown RBP15.37■□□□□ 0.05
MSH2-206ENST00000543555 REEP2Q9BRK0 252 aa15.37■□□□□ 0.05
MSH2-206ENST00000543555 ANKZF1Q9H8Y5 726 aa15.37■□□□□ 0.05
MSH2-206ENST00000543555 ZNF541Q9H0D2 1346 aa15.37■□□□□ 0.05
MSH2-206ENST00000543555 ENC1O14682 589 aa15.37■□□□□ 0.05
MSH2-206ENST00000543555 CFBP00751 764 aa15.37■□□□□ 0.05
MSH2-206ENST00000543555 KIF5AQ12840 1032 aa15.37■□□□□ 0.05
MSH2-206ENST00000543555 SAMD7Q7Z3H4 446 aa15.37■□□□□ 0.05
MSH2-206ENST00000543555 KRT26Q7Z3Y9 468 aa15.37■□□□□ 0.05
MSH2-206ENST00000543555 POLR3CQ9BUI4 534 aaPredicted RBP15.37■□□□□ 0.05
MSH2-206ENST00000543555 TSGA10Q9BZW7 698 aa15.37■□□□□ 0.05
MSH2-206ENST00000543555 RANBP17Q9H2T7 1088 aaKnown RBP15.37■□□□□ 0.05
MSH2-206ENST00000543555 VEZTQ9HBM0 779 aa15.37■□□□□ 0.05
MSH2-206ENST00000543555 POTEB2H3BUK9 544 aa15.36■□□□□ 0.05
MSH2-206ENST00000543555 ATP1A1P05023 1023 aaKnown RBP15.36■□□□□ 0.05
MSH2-206ENST00000543555 KIF11P52732 1056 aa15.36■□□□□ 0.05
MSH2-206ENST00000543555 CYP4A11Q02928 519 aa15.36■□□□□ 0.05
MSH2-206ENST00000543555 FKBP1CQ5VVH2 108 aa15.36■□□□□ 0.05
MSH2-206ENST00000543555 PDXDC1Q6P996 788 aa15.36■□□□□ 0.05
MSH2-206ENST00000543555 CCDC174Q6PII3 467 aa15.36■□□□□ 0.05
MSH2-206ENST00000543555 CACNA2D4Q7Z3S7 1137 aa15.36■□□□□ 0.05
MSH2-206ENST00000543555 CDAN1Q8IWY9 1227 aa15.36■□□□□ 0.05
MSH2-206ENST00000543555 MSANTD4Q8NCY6 345 aa15.36■□□□□ 0.05
MSH2-206ENST00000543555 CHURC1Q8WUH1 139 aa15.36■□□□□ 0.05
MSH2-206ENST00000543555 EIF2AK1Q9BQI3 630 aaKnown RBP15.36■□□□□ 0.05
MSH2-206ENST00000543555 VCPKMTQ9H867 229 aa15.36■□□□□ 0.05
MSH2-206ENST00000543555 ARFGAP3Q9NP61 516 aa15.36■□□□□ 0.05
MSH2-206ENST00000543555 CCDC151A5D8V7 595 aa15.36■□□□□ 0.05
MSH2-206ENST00000543555 LCA5LO95447 670 aa15.36■□□□□ 0.05
MSH2-206ENST00000543555 EIF4A3P38919 411 aaKnown RBP15.36■□□□□ 0.05
MSH2-206ENST00000543555 CASP5P51878 434 aa15.36■□□□□ 0.05
MSH2-206ENST00000543555 BRD3Q15059 726 aa15.36■□□□□ 0.05
MSH2-206ENST00000543555 PAPD7Q5XG87 772 aaKnown RBP15.36■□□□□ 0.05
MSH2-206ENST00000543555 SFR1Q86XK3 245 aa15.36■□□□□ 0.05
MSH2-206ENST00000543555 TBC1D5Q92609 795 aa15.36■□□□□ 0.05
MSH2-206ENST00000543555 WDR18Q9BV38 432 aa15.36■□□□□ 0.05
MSH2-206ENST00000543555 RNF181Q9P0P0 153 aa15.36■□□□□ 0.05
MSH2-206ENST00000543555 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.36■□□□□ 0.05
MSH2-206ENST00000543555 DUSP10Q9Y6W6 482 aa15.36■□□□□ 0.05
MSH2-206ENST00000543555 ASTN2O75129 1339 aaPredicted RBP15.36■□□□□ 0.05
MSH2-206ENST00000543555 GCOM1H8Y6P7 765 aaPredicted RBP15.35■□□□□ 0.05
MSH2-206ENST00000543555 EML1O00423 815 aa15.35■□□□□ 0.05
MSH2-206ENST00000543555 SOCS7O14512 581 aa15.35■□□□□ 0.05
MSH2-206ENST00000543555 TBC1D12O60347 775 aa15.35■□□□□ 0.05
MSH2-206ENST00000543555 POLR2MP0CAP2 368 aa15.35■□□□□ 0.05
MSH2-206ENST00000543555 ADAM9Q13443 819 aa15.35■□□□□ 0.05
MSH2-206ENST00000543555 CIAPIN1Q6FI81 312 aa15.35■□□□□ 0.05
MSH2-206ENST00000543555 TMEM39BQ9GZU3 492 aa15.35■□□□□ 0.05
MSH2-206ENST00000543555 DEF6Q9H4E7 631 aa15.35■□□□□ 0.05
MSH2-206ENST00000543555 HDAC6Q9UBN7 1215 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms