RNA–Protein interactions for RNA: ENST00000541922.1

C2CD3-216, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 5

Gene C2CD3, Length 767 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-216ENST00000541922 TRIM71Q2Q1W2 868 aaKnown RBP25.19■■□□□ 1.62
C2CD3-216ENST00000541922 SERINC5Q86VE9 423 aa25.19■■□□□ 1.62
C2CD3-216ENST00000541922 TRIM22Q8IYM9 498 aa25.19■■□□□ 1.62
C2CD3-216ENST00000541922 REXO1Q8N1G1 1221 aaKnown RBP25.19■■□□□ 1.62
C2CD3-216ENST00000541922 CCDC148Q8NFR7 591 aa25.19■■□□□ 1.62
C2CD3-216ENST00000541922 WNT8BQ93098 351 aa25.19■■□□□ 1.62
C2CD3-216ENST00000541922 LARP6Q9BRS8 491 aaKnown RBP25.19■■□□□ 1.62
C2CD3-216ENST00000541922 ZNF576Q9H609 170 aa25.19■■□□□ 1.62
C2CD3-216ENST00000541922 CPLX1O14810 134 aa25.18■■□□□ 1.62
C2CD3-216ENST00000541922 ARP10275 920 aa25.18■■□□□ 1.62
C2CD3-216ENST00000541922 ATP2A2P16615 1042 aaKnown RBP25.18■■□□□ 1.62
C2CD3-216ENST00000541922 ZNF618Q5T7W0 954 aa25.18■■□□□ 1.62
C2CD3-216ENST00000541922 SDF4Q9BRK5 362 aa25.18■■□□□ 1.62
C2CD3-216ENST00000541922 JPH1Q9HDC5 661 aaPredicted RBP25.18■■□□□ 1.62
C2CD3-216ENST00000541922 SETD4Q9NVD3 440 aa25.18■■□□□ 1.62
C2CD3-216ENST00000541922 SLC9A2Q9UBY0 812 aa25.18■■□□□ 1.62
C2CD3-216ENST00000541922 MEIS1O00470 390 aa25.17■■□□□ 1.62
C2CD3-216ENST00000541922 TREHO43280 583 aa25.17■■□□□ 1.62
C2CD3-216ENST00000541922 THPOP40225 353 aa25.17■■□□□ 1.62
C2CD3-216ENST00000541922 SSRP1Q08945 709 aaKnown RBP25.17■■□□□ 1.62
C2CD3-216ENST00000541922 BICD2Q8TD16 824 aa25.17■■□□□ 1.62
C2CD3-216ENST00000541922 GLG1Q92896 1179 aa25.17■■□□□ 1.62
C2CD3-216ENST00000541922 NFASCO94856 1347 aa25.16■■□□□ 1.62
C2CD3-216ENST00000541922 EIF5BO60841 1220 aaKnown RBP25.16■■□□□ 1.62
C2CD3-216ENST00000541922 BAIAP3O94812 1187 aa25.16■■□□□ 1.62
C2CD3-216ENST00000541922 ANAPC15P60006 121 aa25.16■■□□□ 1.62
C2CD3-216ENST00000541922 STK3Q13188 491 aa25.16■■□□□ 1.62
C2CD3-216ENST00000541922 GPNMBQ14956 572 aa25.16■■□□□ 1.62
C2CD3-216ENST00000541922 CPLX2Q6PUV4 134 aaKnown RBP25.16■■□□□ 1.62
C2CD3-216ENST00000541922 NIPA1Q7RTP0 329 aa25.16■■□□□ 1.62
C2CD3-216ENST00000541922 MYLIPQ8WY64 445 aa25.16■■□□□ 1.62
C2CD3-216ENST00000541922 SMARCAD1Q9H4L7 1026 aa25.16■■□□□ 1.62
C2CD3-216ENST00000541922 AGO4Q9HCK5 861 aaKnown RBP25.16■■□□□ 1.62
C2CD3-216ENST00000541922 ERAP1Q9NZ08 941 aa25.16■■□□□ 1.62
C2CD3-216ENST00000541922 VPS54Q9P1Q0 977 aa25.16■■□□□ 1.62
C2CD3-216ENST00000541922 ADAMTS3O15072 1205 aa25.15■■□□□ 1.62
C2CD3-216ENST00000541922 NBNO60934 754 aa25.15■■□□□ 1.62
C2CD3-216ENST00000541922 CXCL10P02778 98 aa25.15■■□□□ 1.62
C2CD3-216ENST00000541922 CYP3A4P08684 503 aa25.15■■□□□ 1.62
C2CD3-216ENST00000541922 RABGGTBP53611 331 aa25.15■■□□□ 1.62
C2CD3-216ENST00000541922 GRIN2CQ14957 1233 aa25.15■■□□□ 1.62
C2CD3-216ENST00000541922 TRAF7Q6Q0C0 670 aa25.15■■□□□ 1.62
C2CD3-216ENST00000541922 LMBR1Q8WVP7 490 aa25.15■■□□□ 1.62
C2CD3-216ENST00000541922 SLC9A7Q96T83 725 aa25.15■■□□□ 1.62
C2CD3-216ENST00000541922 NKX2-4Q9H2Z4 354 aa25.15■■□□□ 1.62
C2CD3-216ENST00000541922 SH3GLB2Q9NR46 395 aa25.15■■□□□ 1.62
C2CD3-216ENST00000541922 NRCAMQ92823 1304 aa25.14■■□□□ 1.62
C2CD3-216ENST00000541922 MARK3P27448 753 aa25.14■■□□□ 1.62
C2CD3-216ENST00000541922 CNKSR3Q6P9H4 555 aa25.14■■□□□ 1.62
C2CD3-216ENST00000541922 PLA2G4DQ86XP0 818 aa25.14■■□□□ 1.62
C2CD3-216ENST00000541922 PHOSPHO2Q8TCD6 241 aa25.14■■□□□ 1.62
C2CD3-216ENST00000541922 CRYGNQ8WXF5 182 aa25.14■■□□□ 1.62
C2CD3-216ENST00000541922 SLC28A3Q9HAS3 691 aa25.14■■□□□ 1.62
C2CD3-216ENST00000541922 YBX2Q9Y2T7 364 aaKnown RBP25.14■■□□□ 1.62
C2CD3-216ENST00000541922 PCDHA11Q9Y5I1 949 aa25.14■■□□□ 1.62
C2CD3-216ENST00000541922 EMSYQ7Z589 1322 aa25.13■■□□□ 1.61
C2CD3-216ENST00000541922 RSPH10B2B2RC85 870 aa25.13■■□□□ 1.61
C2CD3-216ENST00000541922 FAM86B1E9PN63 330 aa25.13■■□□□ 1.61
C2CD3-216ENST00000541922 FAM86B2P0C5J1 330 aa25.13■■□□□ 1.61
C2CD3-216ENST00000541922 RSPH10BP0C881 870 aa25.13■■□□□ 1.61
C2CD3-216ENST00000541922 FOSL2P15408 326 aa25.13■■□□□ 1.61
C2CD3-216ENST00000541922 KCNJ6P48051 423 aa25.13■■□□□ 1.61
C2CD3-216ENST00000541922 NLRP5P59047 1200 aa25.13■■□□□ 1.61
C2CD3-216ENST00000541922 ACTR2P61160 394 aa25.13■■□□□ 1.61
C2CD3-216ENST00000541922 ITGB3BPQ13352 177 aaPredicted RBP25.13■■□□□ 1.61
C2CD3-216ENST00000541922 RASGRP4Q8TDF6 673 aa25.13■■□□□ 1.61
C2CD3-216ENST00000541922 AZI2Q9H6S1 392 aa25.13■■□□□ 1.61
C2CD3-216ENST00000541922 CAND2O75155 1236 aa25.12■■□□□ 1.61
C2CD3-216ENST00000541922 LGR5O75473 907 aa25.12■■□□□ 1.61
C2CD3-216ENST00000541922 DEXIO95424 95 aa25.12■■□□□ 1.61
C2CD3-216ENST00000541922 ADAM17P78536 824 aa25.12■■□□□ 1.61
C2CD3-216ENST00000541922 PPFIA1Q13136 1202 aa25.12■■□□□ 1.61
C2CD3-216ENST00000541922 MBTPS1Q14703 1052 aa25.12■■□□□ 1.61
C2CD3-216ENST00000541922 SLC17A8Q8NDX2 589 aa25.12■■□□□ 1.61
C2CD3-216ENST00000541922 MYO9BQ13459 2157 aa25.12■■□□□ 1.61
C2CD3-216ENST00000541922 IGLV3-22A0A075B6J6 115 aa25.11■■□□□ 1.61
C2CD3-216ENST00000541922 SLKQ9H2G2 1235 aaPredicted RBP25.11■■□□□ 1.61
C2CD3-216ENST00000541922 ABHD14A-ACY1A0A1B0GW23 586 aa25.1■■□□□ 1.61
C2CD3-216ENST00000541922 DDX39AO00148 427 aaKnown RBP25.1■■□□□ 1.61
C2CD3-216ENST00000541922 CTSHP09668 335 aa25.1■■□□□ 1.61
C2CD3-216ENST00000541922 MYOGP15173 224 aa25.1■■□□□ 1.61
C2CD3-216ENST00000541922 SETQ01105 290 aaPredicted RBP25.1■■□□□ 1.61
C2CD3-216ENST00000541922 GRIK4Q16099 956 aa25.1■■□□□ 1.61
C2CD3-216ENST00000541922 PCYT2Q99447 389 aa25.1■■□□□ 1.61
C2CD3-216ENST00000541922 KIF28PB7ZC32 967 aa25.09■■□□□ 1.61
C2CD3-216ENST00000541922 IPO5O00410 1097 aaKnown RBP25.09■■□□□ 1.61
C2CD3-216ENST00000541922 EFCAB14O75071 495 aa25.09■■□□□ 1.61
C2CD3-216ENST00000541922 CDKL5O76039 1030 aa25.09■■□□□ 1.61
C2CD3-216ENST00000541922 WDR5P61964 334 aaKnown RBP25.09■■□□□ 1.61
C2CD3-216ENST00000541922 IKBKEQ14164 716 aa25.09■■□□□ 1.61
C2CD3-216ENST00000541922 ANKRD1Q15327 319 aa25.09■■□□□ 1.61
C2CD3-216ENST00000541922 PPP2R2DQ66LE6 453 aa25.09■■□□□ 1.61
C2CD3-216ENST00000541922 HERC6Q8IVU3 1022 aa25.09■■□□□ 1.61
C2CD3-216ENST00000541922 TNPO1Q92973 898 aaKnown RBP25.09■■□□□ 1.61
C2CD3-216ENST00000541922 PTPRSQ13332 1948 aa25.08■■□□□ 1.61
C2CD3-216ENST00000541922 STAT5BP51692 787 aa25.08■■□□□ 1.61
C2CD3-216ENST00000541922 SCRN1Q12765 414 aa25.08■■□□□ 1.61
C2CD3-216ENST00000541922 TCTN1Q2MV58 587 aa25.08■■□□□ 1.61
C2CD3-216ENST00000541922 PRR16Q569H4 304 aa25.08■■□□□ 1.61
C2CD3-216ENST00000541922 TAF2Q6P1X5 1199 aa25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms