RNA–Protein interactions for RNA: ENST00000541841.1

CIT-211, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-211ENST00000541841 ITGB3P05106 788 aa7.12□□□□□ -1.27
CIT-211ENST00000541841 GRK2P25098 689 aa7.12□□□□□ -1.27
CIT-211ENST00000541841 IL13P35225 146 aa7.12□□□□□ -1.27
CIT-211ENST00000541841 GRK3P35626 688 aa7.12□□□□□ -1.27
CIT-211ENST00000541841 RBM10P98175 930 aaKnown RBP7.12□□□□□ -1.27
CIT-211ENST00000541841 SPATS1Q496A3 300 aa7.12□□□□□ -1.27
CIT-211ENST00000541841 FAM26FQ5R3K3 315 aa7.12□□□□□ -1.27
CIT-211ENST00000541841 LILRB2Q8N423 598 aa7.12□□□□□ -1.27
CIT-211ENST00000541841 STAG1Q8WVM7 1258 aa7.12□□□□□ -1.27
CIT-211ENST00000541841 SGSM3Q96HU1 749 aa7.12□□□□□ -1.27
CIT-211ENST00000541841 RBM15Q96T37 977 aaKnown RBP eCLIP7.12□□□□□ -1.27
CIT-211ENST00000541841 SLC6A20Q9NP91 592 aa7.12□□□□□ -1.27
CIT-211ENST00000541841 NKRFO15226 690 aaKnown RBP eCLIP7.11□□□□□ -1.27
CIT-211ENST00000541841 FGFR1P11362 822 aa7.11□□□□□ -1.27
CIT-211ENST00000541841 LBX2Q6XYB7 198 aa7.11□□□□□ -1.27
CIT-211ENST00000541841 OTOP3Q7RTS5 596 aa7.11□□□□□ -1.27
CIT-211ENST00000541841 LIMS2Q7Z4I7 341 aa7.11□□□□□ -1.27
CIT-211ENST00000541841 PROSER1Q86XN7 944 aa7.11□□□□□ -1.27
CIT-211ENST00000541841 CLIC6Q96NY7 704 aa7.11□□□□□ -1.27
CIT-211ENST00000541841 NGRNQ9NPE2 291 aaKnown RBP7.11□□□□□ -1.27
CIT-211ENST00000541841 CHPF2Q9P2E5 772 aa7.11□□□□□ -1.27
CIT-211ENST00000541841 PFDN2Q9UHV9 154 aa7.11□□□□□ -1.27
CIT-211ENST00000541841 G3BP2Q9UN86 482 aaKnown RBP7.11□□□□□ -1.27
CIT-211ENST00000541841 TRAF6Q9Y4K3 522 aa7.11□□□□□ -1.27
CIT-211ENST00000541841 TELO2Q9Y4R8 837 aa7.11□□□□□ -1.27
CIT-211ENST00000541841 TRAV20A0A0B4J274 112 aa7.1□□□□□ -1.27
CIT-211ENST00000541841 ESYT3A0FGR9 886 aa7.1□□□□□ -1.27
CIT-211ENST00000541841 KRIT1O00522 736 aa7.1□□□□□ -1.27
CIT-211ENST00000541841 PPP1R12AO14974 1030 aaPredicted RBP7.1□□□□□ -1.27
CIT-211ENST00000541841 B4GALT3O60512 393 aa7.1□□□□□ -1.27
CIT-211ENST00000541841 INSRRP14616 1297 aa7.1□□□□□ -1.27
CIT-211ENST00000541841 AMPD3Q01432 767 aa7.1□□□□□ -1.27
CIT-211ENST00000541841 TUSC3Q13454 348 aa7.1□□□□□ -1.27
CIT-211ENST00000541841 ZNF827Q17R98 1081 aa7.1□□□□□ -1.27
CIT-211ENST00000541841 CCDC181Q5TID7 509 aa7.1□□□□□ -1.27
CIT-211ENST00000541841 DCAF4Q8WV16 495 aa7.1□□□□□ -1.27
CIT-211ENST00000541841 LCORQ96JN0 433 aaPredicted RBP7.1□□□□□ -1.27
CIT-211ENST00000541841 DNAJC7Q99615 494 aa7.1□□□□□ -1.27
CIT-211ENST00000541841 L2HGDHQ9H9P8 463 aa7.1□□□□□ -1.27
CIT-211ENST00000541841 DDX56Q9NY93 547 aaKnown RBP7.1□□□□□ -1.27
CIT-211ENST00000541841 ZNF536O15090 1300 aa7.09□□□□□ -1.27
CIT-211ENST00000541841 IQCA1LA6NCM1 817 aa7.09□□□□□ -1.27
CIT-211ENST00000541841 PLATP00750 562 aa7.09□□□□□ -1.27
CIT-211ENST00000541841 GNAT1P11488 350 aa7.09□□□□□ -1.27
CIT-211ENST00000541841 KIAA2012Q0VF49 1180 aa7.09□□□□□ -1.27
CIT-211ENST00000541841 IFRD2Q12894 506 aaPredicted RBP7.09□□□□□ -1.27
CIT-211ENST00000541841 TRMT10BQ6PF06 316 aaKnown RBP7.09□□□□□ -1.27
CIT-211ENST00000541841 RSPO2Q6UXX9 243 aaPredicted RBP7.09□□□□□ -1.27
CIT-211ENST00000541841 LGI4Q8N135 537 aa7.09□□□□□ -1.27
CIT-211ENST00000541841 ST13P5Q8NFI4 369 aaPredicted RBP7.09□□□□□ -1.27
CIT-211ENST00000541841 PHOSPHO1Q8TCT1 267 aa7.09□□□□□ -1.27
CIT-211ENST00000541841 YTHDC1Q96MU7 727 aaKnown RBP7.09□□□□□ -1.27
CIT-211ENST00000541841 SLKQ9H2G2 1235 aaPredicted RBP7.09□□□□□ -1.27
CIT-211ENST00000541841 IPPKQ9H8X2 491 aa7.09□□□□□ -1.27
CIT-211ENST00000541841 PRKAB1Q9Y478 270 aa7.09□□□□□ -1.27
CIT-211ENST00000541841 MAP4K4O95819 1239 aaPredicted RBP7.08□□□□□ -1.28
CIT-211ENST00000541841 GPR85P60893 370 aa7.08□□□□□ -1.28
CIT-211ENST00000541841 KIZQ2M2Z5 673 aa7.08□□□□□ -1.28
CIT-211ENST00000541841 STYK1Q6J9G0 422 aa7.08□□□□□ -1.28
CIT-211ENST00000541841 BORAQ6PGQ7 559 aa7.08□□□□□ -1.28
CIT-211ENST00000541841 DBX2Q6ZNG2 339 aa7.08□□□□□ -1.28
CIT-211ENST00000541841 FAM124AQ86V42 546 aa7.08□□□□□ -1.28
CIT-211ENST00000541841 APPBP2Q92624 585 aa7.08□□□□□ -1.28
CIT-211ENST00000541841 MBD6Q96DN6 1003 aa7.08□□□□□ -1.28
CIT-211ENST00000541841 LOXL4Q96JB6 756 aa7.08□□□□□ -1.28
CIT-211ENST00000541841 TMEM209Q96SK2 561 aa7.08□□□□□ -1.28
CIT-211ENST00000541841 CD244Q9BZW8 370 aa7.08□□□□□ -1.28
CIT-211ENST00000541841 SMPD4Q9NXE4 827 aa7.08□□□□□ -1.28
CIT-211ENST00000541841 RIPOR2Q9Y4F9 1068 aa7.08□□□□□ -1.28
CIT-211ENST00000541841 MAFKO60675 156 aa7.07□□□□□ -1.28
CIT-211ENST00000541841 SOD2P04179 222 aa7.07□□□□□ -1.28
CIT-211ENST00000541841 CKMP06732 381 aa7.07□□□□□ -1.28
CIT-211ENST00000541841 COL6A1P12109 1028 aa7.07□□□□□ -1.28
CIT-211ENST00000541841 MAGEA10P43363 369 aaPredicted RBP7.07□□□□□ -1.28
CIT-211ENST00000541841 GLRBP48167 497 aa7.07□□□□□ -1.28
CIT-211ENST00000541841 GYS2P54840 703 aa7.07□□□□□ -1.28
CIT-211ENST00000541841 PUM1Q14671 1186 aaKnown RBP eCLIP7.07□□□□□ -1.28
CIT-211ENST00000541841 FOXB2Q5VYV0 432 aa7.07□□□□□ -1.28
CIT-211ENST00000541841 VASNQ6EMK4 673 aa7.07□□□□□ -1.28
CIT-211ENST00000541841 LRRC47Q8N1G4 583 aaKnown RBP7.07□□□□□ -1.28
CIT-211ENST00000541841 NUDT10Q8NFP7 164 aa7.07□□□□□ -1.28
CIT-211ENST00000541841 NUDT11Q96G61 164 aa7.07□□□□□ -1.28
CIT-211ENST00000541841 C8orf49Q96NF6 230 aa7.07□□□□□ -1.28
CIT-211ENST00000541841 SPATA9Q9BWV2 254 aa7.07□□□□□ -1.28
CIT-211ENST00000541841 TMEM168Q9H0V1 697 aa7.07□□□□□ -1.28
CIT-211ENST00000541841 ST6GALNAC2Q9UJ37 374 aa7.07□□□□□ -1.28
CIT-211ENST00000541841 MSRB2Q9Y3D2 182 aa7.07□□□□□ -1.28
CIT-211ENST00000541841 DIAPH1O60610 1272 aaKnown RBP7.06□□□□□ -1.28
CIT-211ENST00000541841 S100BP04271 92 aaPredicted RBP7.06□□□□□ -1.28
CIT-211ENST00000541841 ADAM17P78536 824 aa7.06□□□□□ -1.28
CIT-211ENST00000541841 SQSTM1Q13501 440 aa7.06□□□□□ -1.28
CIT-211ENST00000541841 PAN2Q504Q3 1202 aaKnown RBP7.06□□□□□ -1.28
CIT-211ENST00000541841 CYP4F22Q6NT55 531 aa7.06□□□□□ -1.28
CIT-211ENST00000541841 LRP10Q7Z4F1 713 aa7.06□□□□□ -1.28
CIT-211ENST00000541841 IFNL3Q8IZI9 196 aa7.06□□□□□ -1.28
CIT-211ENST00000541841 UHMK1Q8TAS1 419 aaKnown RBP7.06□□□□□ -1.28
CIT-211ENST00000541841 GPR20Q99678 358 aa7.06□□□□□ -1.28
CIT-211ENST00000541841 PTPN18Q99952 460 aa7.06□□□□□ -1.28
CIT-211ENST00000541841 SSBP3Q9BWW4 388 aaPredicted RBP7.06□□□□□ -1.28
CIT-211ENST00000541841 KRTAP3-1Q9BYR8 98 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms