RNA–Protein interactions for RNA: ENST00000541416.5

SNHG1-216, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 996 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-216ENST00000541416 GRM4Q14833 912 aa14.15□□□□□ -0.14
SNHG1-216ENST00000541416 FAM26DQ5JW98 314 aa14.15□□□□□ -0.14
SNHG1-216ENST00000541416 POTEBQ6S5H4 581 aa14.15□□□□□ -0.14
SNHG1-216ENST00000541416 RPAINQ86UA6 219 aa14.15□□□□□ -0.14
SNHG1-216ENST00000541416 NLRX1Q86UT6 975 aa14.15□□□□□ -0.14
SNHG1-216ENST00000541416 SMC5Q8IY18 1101 aa14.15□□□□□ -0.14
SNHG1-216ENST00000541416 CDHR1Q96JP9 859 aa14.15□□□□□ -0.14
SNHG1-216ENST00000541416 SENP7Q9BQF6 1050 aa14.15□□□□□ -0.14
SNHG1-216ENST00000541416 U3KPZ7 1027 aaPredicted RBP14.15□□□□□ -0.14
SNHG1-216ENST00000541416 C19orf67A6NJJ6 358 aa14.14□□□□□ -0.15
SNHG1-216ENST00000541416 IFIT3O14879 490 aaKnown RBP14.14□□□□□ -0.15
SNHG1-216ENST00000541416 BTG3Q14201 252 aaPredicted RBP14.14□□□□□ -0.15
SNHG1-216ENST00000541416 UTP14CQ5TAP6 766 aaKnown RBP14.14□□□□□ -0.15
SNHG1-216ENST00000541416 CATIPQ7Z7H3 387 aa14.14□□□□□ -0.15
SNHG1-216ENST00000541416 RALYLQ86SE5 291 aaKnown RBP14.14□□□□□ -0.15
SNHG1-216ENST00000541416 PLEKHM2Q8IWE5 1019 aa14.14□□□□□ -0.15
SNHG1-216ENST00000541416 SMARCC2Q8TAQ2 1214 aa14.14□□□□□ -0.15
SNHG1-216ENST00000541416 LMBR1Q8WVP7 490 aa14.14□□□□□ -0.15
SNHG1-216ENST00000541416 GPKOWQ92917 476 aaPredicted RBP eCLIP14.14□□□□□ -0.157e-32■■■□□ 17.2
SNHG1-216ENST00000541416 TNPO1Q92973 898 aaKnown RBP14.14□□□□□ -0.15
SNHG1-216ENST00000541416 ZFP91Q96JP5 570 aaPredicted RBP14.14□□□□□ -0.15
SNHG1-216ENST00000541416 PLVAPQ9BX97 442 aa14.14□□□□□ -0.15
SNHG1-216ENST00000541416 RTEL1Q9NZ71 1219 aa14.14□□□□□ -0.15
SNHG1-216ENST00000541416 FRMPD4Q14CM0 1322 aa14.14□□□□□ -0.15
SNHG1-216ENST00000541416 MRE11P49959 708 aa14.13□□□□□ -0.15
SNHG1-216ENST00000541416 MRPS9P82933 396 aaKnown RBP14.13□□□□□ -0.15
SNHG1-216ENST00000541416 NUCB1Q02818 461 aa14.13□□□□□ -0.15
SNHG1-216ENST00000541416 WTAPQ15007 396 aa14.13□□□□□ -0.15
SNHG1-216ENST00000541416 SMAD2Q15796 467 aaKnown RBP14.13□□□□□ -0.15
SNHG1-216ENST00000541416 CTC1Q2NKJ3 1217 aa14.13□□□□□ -0.15
SNHG1-216ENST00000541416 PCNX4Q63HM2 1172 aa14.13□□□□□ -0.15
SNHG1-216ENST00000541416 ERAP1Q9NZ08 941 aa14.13□□□□□ -0.15
SNHG1-216ENST00000541416 SEC63Q9UGP8 760 aaKnown RBP14.13□□□□□ -0.15
SNHG1-216ENST00000541416 GHRP10912 638 aa14.12□□□□□ -0.15
SNHG1-216ENST00000541416 KIF5BP33176 963 aa14.12□□□□□ -0.15
SNHG1-216ENST00000541416 ADAM17P78536 824 aa14.12□□□□□ -0.15
SNHG1-216ENST00000541416 SP4Q02446 784 aa14.12□□□□□ -0.15
SNHG1-216ENST00000541416 PPFIA1Q13136 1202 aa14.12□□□□□ -0.15
SNHG1-216ENST00000541416 SMAD4Q13485 552 aaKnown RBP14.12□□□□□ -0.15
SNHG1-216ENST00000541416 NAALADL2Q58DX5 795 aa14.12□□□□□ -0.15
SNHG1-216ENST00000541416 CYB5R4Q7L1T6 521 aa14.12□□□□□ -0.15
SNHG1-216ENST00000541416 TRIM50Q86XT4 487 aa14.12□□□□□ -0.15
SNHG1-216ENST00000541416 RUFY2Q8WXA3 655 aa14.12□□□□□ -0.15
SNHG1-216ENST00000541416 CLP1Q92989 425 aaKnown RBP14.12□□□□□ -0.15
SNHG1-216ENST00000541416 TUBE1Q9UJT0 475 aa14.12□□□□□ -0.15
SNHG1-216ENST00000541416 M0QZ92 97 aa14.11□□□□□ -0.15
SNHG1-216ENST00000541416 MBTPS2O43462 519 aa14.11□□□□□ -0.15
SNHG1-216ENST00000541416 CHRNA1P02708 482 aa14.11□□□□□ -0.15
SNHG1-216ENST00000541416 MMP1P03956 469 aa14.11□□□□□ -0.15
SNHG1-216ENST00000541416 IRS1P35568 1242 aa14.11□□□□□ -0.15
SNHG1-216ENST00000541416 TCF7P36402 384 aaPredicted RBP14.11□□□□□ -0.15
SNHG1-216ENST00000541416 LTBRP36941 435 aa14.11□□□□□ -0.15
SNHG1-216ENST00000541416 NDUFV1P49821 464 aa14.11□□□□□ -0.15
SNHG1-216ENST00000541416 NHLH1Q02575 133 aa14.11□□□□□ -0.15
SNHG1-216ENST00000541416 HYAL1Q12794 435 aa14.11□□□□□ -0.15
SNHG1-216ENST00000541416 PKN1Q16512 942 aa14.11□□□□□ -0.15
SNHG1-216ENST00000541416 HERC4Q5GLZ8 1057 aaPredicted RBP14.11□□□□□ -0.15
SNHG1-216ENST00000541416 IER5Q5VY09 327 aa14.11□□□□□ -0.15
SNHG1-216ENST00000541416 TSHZ1Q6ZSZ6 1077 aa14.11□□□□□ -0.15
SNHG1-216ENST00000541416 NCOA7Q8NI08 942 aa14.11□□□□□ -0.15
SNHG1-216ENST00000541416 CTCFLQ8NI51 663 aaPredicted RBP14.11□□□□□ -0.15
SNHG1-216ENST00000541416 SEPT1Q8WYJ6 367 aa14.11□□□□□ -0.15
SNHG1-216ENST00000541416 GLG1Q92896 1179 aa14.11□□□□□ -0.15
SNHG1-216ENST00000541416 P2RX5Q93086 422 aa14.11□□□□□ -0.15
SNHG1-216ENST00000541416 GPRASP2Q96D09 838 aa14.11□□□□□ -0.15
SNHG1-216ENST00000541416 RRP36Q96EU6 259 aaKnown RBP14.11□□□□□ -0.15
SNHG1-216ENST00000541416 FBXL18Q96ME1 805 aa14.11□□□□□ -0.15
SNHG1-216ENST00000541416 PRRX2Q99811 253 aa14.11□□□□□ -0.15
SNHG1-216ENST00000541416 FTHL17Q9BXU8 183 aa14.11□□□□□ -0.15
SNHG1-216ENST00000541416 IGFLR1Q9H665 355 aa14.11□□□□□ -0.15
SNHG1-216ENST00000541416 EHMT1Q9H9B1 1298 aa14.11□□□□□ -0.15
SNHG1-216ENST00000541416 RNF216Q9NWF9 866 aaPredicted RBP14.11□□□□□ -0.15
SNHG1-216ENST00000541416 CD207Q9UJ71 328 aa14.11□□□□□ -0.15
SNHG1-216ENST00000541416 STXBP3O00186 592 aa14.1□□□□□ -0.15
SNHG1-216ENST00000541416 PIK3CDO00329 1044 aa14.1□□□□□ -0.15
SNHG1-216ENST00000541416 ENPP3O14638 875 aa14.1□□□□□ -0.15
SNHG1-216ENST00000541416 GRM6O15303 877 aa14.1□□□□□ -0.15
SNHG1-216ENST00000541416 CYTH3O43739 400 aa14.1□□□□□ -0.15
SNHG1-216ENST00000541416 STAG3L1P0CL83 205 aa14.1□□□□□ -0.15
SNHG1-216ENST00000541416 TROAPQ12815 778 aa14.1□□□□□ -0.15
SNHG1-216ENST00000541416 LPIN1Q14693 890 aa14.1□□□□□ -0.15
SNHG1-216ENST00000541416 CLUL1Q15846 466 aa14.1□□□□□ -0.15
SNHG1-216ENST00000541416 GRIK4Q16099 956 aa14.1□□□□□ -0.15
SNHG1-216ENST00000541416 FAM43BQ6ZT52 329 aaPredicted RBP14.1□□□□□ -0.15
SNHG1-216ENST00000541416 MAP3K14Q99558 947 aa14.1□□□□□ -0.15
SNHG1-216ENST00000541416 LZTS2Q9BRK4 669 aa14.1□□□□□ -0.15
SNHG1-216ENST00000541416 SMARCAD1Q9H4L7 1026 aa14.1□□□□□ -0.15
SNHG1-216ENST00000541416 BCAS3Q9H6U6 928 aa14.1□□□□□ -0.15
SNHG1-216ENST00000541416 SQORQ9Y6N5 450 aa14.1□□□□□ -0.15
SNHG1-216ENST00000541416 BAZ2BQ9UIF8 2168 aaKnown RBP14.09□□□□□ -0.15
SNHG1-216ENST00000541416 FSD2A1L4K1 749 aa14.09□□□□□ -0.15
SNHG1-216ENST00000541416 RRN3P2A6NIE6 340 aa14.09□□□□□ -0.15
SNHG1-216ENST00000541416 GNAQP50148 359 aa14.09□□□□□ -0.15
SNHG1-216ENST00000541416 SEMA3FQ13275 785 aa14.09□□□□□ -0.15
SNHG1-216ENST00000541416 FBXO47Q5MNV8 452 aa14.09□□□□□ -0.15
SNHG1-216ENST00000541416 HFE2Q6ZVN8 426 aa14.09□□□□□ -0.15
SNHG1-216ENST00000541416 RNF135Q8IUD6 432 aa14.09□□□□□ -0.15
SNHG1-216ENST00000541416 CMTR2Q8IYT2 770 aaKnown RBP14.09□□□□□ -0.15
SNHG1-216ENST00000541416 PIBF1Q8WXW3 757 aa14.09□□□□□ -0.15
SNHG1-216ENST00000541416 ZNF689Q96CS4 500 aaPredicted RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms