RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 H3BRB1 525 aa21.2■□□□□ 0.98
VPS33A-205ENST00000541169 TLR3O15455 904 aaKnown RBP21.2■□□□□ 0.98
VPS33A-205ENST00000541169 SLC37A4O43826 429 aa21.2■□□□□ 0.98
VPS33A-205ENST00000541169 PSMD10O75832 226 aa21.2■□□□□ 0.98
VPS33A-205ENST00000541169 LGALS2P05162 132 aa21.2■□□□□ 0.98
VPS33A-205ENST00000541169 PSAPP07602 524 aa21.2■□□□□ 0.98
VPS33A-205ENST00000541169 SUPT20HL2P0C7V6 817 aa21.2■□□□□ 0.98
VPS33A-205ENST00000541169 CALCRLQ16602 461 aa21.2■□□□□ 0.98
VPS33A-205ENST00000541169 TTC38Q5R3I4 469 aa21.2■□□□□ 0.98
VPS33A-205ENST00000541169 FAM160B1Q5W0V3 765 aa21.2■□□□□ 0.98
VPS33A-205ENST00000541169 PLPPR4Q7Z2D5 763 aa21.2■□□□□ 0.98
VPS33A-205ENST00000541169 SESTD1Q86VW0 696 aa21.2■□□□□ 0.98
VPS33A-205ENST00000541169 C16orf70Q9BSU1 422 aa21.2■□□□□ 0.98
VPS33A-205ENST00000541169 TUT1Q9H6E5 874 aaKnown RBP21.2■□□□□ 0.98
VPS33A-205ENST00000541169 ERAP1Q9NZ08 941 aa21.2■□□□□ 0.98
VPS33A-205ENST00000541169 SCN10AQ9Y5Y9 1956 aa21.19■□□□□ 0.98
VPS33A-205ENST00000541169 GSTTP1A0A1W2PQM5 241 aa21.19■□□□□ 0.98
VPS33A-205ENST00000541169 FAM205CA6NFA0 338 aa21.19■□□□□ 0.98
VPS33A-205ENST00000541169 KIF28PB7ZC32 967 aa21.19■□□□□ 0.98
VPS33A-205ENST00000541169 EVI5O60447 810 aa21.19■□□□□ 0.98
VPS33A-205ENST00000541169 LGR5O75473 907 aa21.19■□□□□ 0.98
VPS33A-205ENST00000541169 BMP15O95972 392 aa21.19■□□□□ 0.98
VPS33A-205ENST00000541169 PTGS1P23219 599 aa21.19■□□□□ 0.98
VPS33A-205ENST00000541169 CDK7P50613 346 aa21.19■□□□□ 0.98
VPS33A-205ENST00000541169 IRX5P78411 483 aaPredicted RBP21.19■□□□□ 0.98
VPS33A-205ENST00000541169 AFAP1L1Q8TED9 768 aa21.19■□□□□ 0.98
VPS33A-205ENST00000541169 DOCK5Q9H7D0 1870 aa21.19■□□□□ 0.98
VPS33A-205ENST00000541169 IGKV6D-21A0A0A0MT36 114 aa21.18■□□□□ 0.98
VPS33A-205ENST00000541169 HAS3O00219 553 aa21.18■□□□□ 0.98
VPS33A-205ENST00000541169 GNAT1P11488 350 aa21.18■□□□□ 0.98
VPS33A-205ENST00000541169 MCM7P33993 719 aa21.18■□□□□ 0.98
VPS33A-205ENST00000541169 SP4Q02446 784 aa21.18■□□□□ 0.98
VPS33A-205ENST00000541169 PPP2R5CQ13362 524 aa21.18■□□□□ 0.98
VPS33A-205ENST00000541169 MFSD10Q14728 455 aa21.18■□□□□ 0.98
VPS33A-205ENST00000541169 ABHD15Q6UXT9 468 aa21.18■□□□□ 0.98
VPS33A-205ENST00000541169 C7orf31Q8N865 590 aa21.18■□□□□ 0.98
VPS33A-205ENST00000541169 DPF3Q92784 378 aa21.18■□□□□ 0.98
VPS33A-205ENST00000541169 GLG1Q92896 1179 aa21.18■□□□□ 0.98
VPS33A-205ENST00000541169 BCAS3Q9H6U6 928 aa21.18■□□□□ 0.98
VPS33A-205ENST00000541169 PCDHA12Q9UN75 941 aa21.18■□□□□ 0.98
VPS33A-205ENST00000541169 SAMM50Q9Y512 469 aa21.18■□□□□ 0.98
VPS33A-205ENST00000541169 SORBS3O60504 671 aa21.17■□□□□ 0.98
VPS33A-205ENST00000541169 DKC1O60832 514 aaKnown RBP eCLIP21.17■□□□□ 0.98
VPS33A-205ENST00000541169 PSEN2P49810 448 aa21.17■□□□□ 0.98
VPS33A-205ENST00000541169 STAT5BP51692 787 aa21.17■□□□□ 0.98
VPS33A-205ENST00000541169 ATN1P54259 1190 aaPredicted RBP21.17■□□□□ 0.98
VPS33A-205ENST00000541169 RTP1P59025 263 aa21.17■□□□□ 0.98
VPS33A-205ENST00000541169 LRRC26Q2I0M4 334 aa21.17■□□□□ 0.98
VPS33A-205ENST00000541169 KIAA0753Q2KHM9 967 aa21.17■□□□□ 0.98
VPS33A-205ENST00000541169 NBPF20Q3BBV1 942 aa21.17■□□□□ 0.98
VPS33A-205ENST00000541169 KAT2BQ92831 832 aa21.17■□□□□ 0.98
VPS33A-205ENST00000541169 DISC1Q9NRI5 854 aa21.17■□□□□ 0.98
VPS33A-205ENST00000541169 FOXD4L1Q9NU39 408 aa21.17■□□□□ 0.98
VPS33A-205ENST00000541169 CEP131Q9UPN4 1083 aa21.17■□□□□ 0.98
VPS33A-205ENST00000541169 DDX39AO00148 427 aaKnown RBP21.16■□□□□ 0.98
VPS33A-205ENST00000541169 BACH1O14867 736 aa21.16■□□□□ 0.98
VPS33A-205ENST00000541169 CCNE2O96020 404 aa21.16■□□□□ 0.98
VPS33A-205ENST00000541169 ZNF286BP0CG31 522 aa21.16■□□□□ 0.98
VPS33A-205ENST00000541169 ATP2B1P20020 1258 aa21.16■□□□□ 0.98
VPS33A-205ENST00000541169 B3GNT9Q6UX72 402 aa21.16■□□□□ 0.98
VPS33A-205ENST00000541169 POTEDQ86YR6 584 aa21.16■□□□□ 0.98
VPS33A-205ENST00000541169 HAS1Q92839 578 aa21.16■□□□□ 0.98
VPS33A-205ENST00000541169 MTMR9Q96QG7 549 aa21.16■□□□□ 0.98
VPS33A-205ENST00000541169 RAB34Q9BZG1 259 aa21.16■□□□□ 0.98
VPS33A-205ENST00000541169 PRKAG2Q9UGJ0 569 aa21.16■□□□□ 0.98
VPS33A-205ENST00000541169 STK24Q9Y6E0 443 aa21.16■□□□□ 0.98
VPS33A-205ENST00000541169 OR52Z1P0C646 297 aa21.15■□□□□ 0.98
VPS33A-205ENST00000541169 ANP32AP39687 249 aaKnown RBP21.15■□□□□ 0.98
VPS33A-205ENST00000541169 PRPHP41219 470 aa21.15■□□□□ 0.98
VPS33A-205ENST00000541169 TMEM266Q2M3C6 531 aa21.15■□□□□ 0.98
VPS33A-205ENST00000541169 UTP14CQ5TAP6 766 aaKnown RBP21.15■□□□□ 0.98
VPS33A-205ENST00000541169 MIER3Q7Z3K6 550 aa21.15■□□□□ 0.98
VPS33A-205ENST00000541169 ATP6V0A1Q93050 837 aa21.15■□□□□ 0.98
VPS33A-205ENST00000541169 FAM167AQ96KS9 214 aa21.15■□□□□ 0.98
VPS33A-205ENST00000541169 TTC12Q9H892 705 aaPredicted RBP21.15■□□□□ 0.98
VPS33A-205ENST00000541169 ZNF302Q9NR11 478 aa21.15■□□□□ 0.98
VPS33A-205ENST00000541169 DAXXQ9UER7 740 aaPredicted RBP21.15■□□□□ 0.98
VPS33A-205ENST00000541169 MTMR6Q9Y217 621 aa21.15■□□□□ 0.98
VPS33A-205ENST00000541169 ATP11BQ9Y2G3 1177 aa21.15■□□□□ 0.98
VPS33A-205ENST00000541169 GRIN2DO15399 1336 aa21.14■□□□□ 0.97
VPS33A-205ENST00000541169 NRCAMQ92823 1304 aa21.14■□□□□ 0.97
VPS33A-205ENST00000541169 TOB1P50616 345 aaPredicted RBP21.14■□□□□ 0.97
VPS33A-205ENST00000541169 PSMC6P62333 389 aa21.14■□□□□ 0.97
VPS33A-205ENST00000541169 ZNF174Q15697 407 aa21.14■□□□□ 0.97
VPS33A-205ENST00000541169 TRIM60Q495X7 471 aa21.14■□□□□ 0.97
VPS33A-205ENST00000541169 FAM126BQ8IXS8 530 aa21.14■□□□□ 0.97
VPS33A-205ENST00000541169 NEK9Q8TD19 979 aa21.14■□□□□ 0.97
VPS33A-205ENST00000541169 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.14■□□□□ 0.97
VPS33A-205ENST00000541169 MAFBQ9Y5Q3 323 aaPredicted RBP21.14■□□□□ 0.97
VPS33A-205ENST00000541169 RRN3P2A6NIE6 340 aa21.13■□□□□ 0.97
VPS33A-205ENST00000541169 RPLP2P05387 115 aaKnown RBP21.13■□□□□ 0.97
VPS33A-205ENST00000541169 CLTBP09497 229 aa21.13■□□□□ 0.97
VPS33A-205ENST00000541169 TLE2Q04725 743 aa21.13■□□□□ 0.97
VPS33A-205ENST00000541169 ARL6IP4Q66PJ3 421 aaKnown RBP21.13■□□□□ 0.97
VPS33A-205ENST00000541169 SWSAP1Q6NVH7 229 aa21.13■□□□□ 0.97
VPS33A-205ENST00000541169 UNC45AQ9H3U1 944 aa21.13■□□□□ 0.97
VPS33A-205ENST00000541169 GTF2IRD1Q9UHL9 959 aa21.13■□□□□ 0.97
VPS33A-205ENST00000541169 VAV3Q9UKW4 847 aa21.13■□□□□ 0.97
VPS33A-205ENST00000541169 PQBP1O60828 265 aaKnown RBP21.12■□□□□ 0.97
VPS33A-205ENST00000541169 CD4P01730 458 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms