RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 SRPK3Q9UPE1 567 aa8.99□□□□□ -0.97
YBX3-210ENST00000540975 COQ6Q9Y2Z9 468 aa8.99□□□□□ -0.97
YBX3-210ENST00000540975 ZNF561-AS1K7EIQ3 104 aa8.98□□□□□ -0.97
YBX3-210ENST00000540975 MAN2B1O00754 1011 aa8.98□□□□□ -0.97
YBX3-210ENST00000540975 KRT15P19012 456 aa8.98□□□□□ -0.97
YBX3-210ENST00000540975 SARSP49591 514 aaKnown RBP8.98□□□□□ -0.97
YBX3-210ENST00000540975 CARFQ8N187 725 aa8.98□□□□□ -0.97
YBX3-210ENST00000540975 CELF4Q9BZC1 486 aaKnown RBP8.98□□□□□ -0.97
YBX3-210ENST00000540975 ZCCHC4Q9H5U6 513 aa8.98□□□□□ -0.97
YBX3-210ENST00000540975 SMURF1Q9HCE7 757 aa8.98□□□□□ -0.97
YBX3-210ENST00000540975 NTMQ9P121 344 aa8.98□□□□□ -0.97
YBX3-210ENST00000540975 FAM90A27PA6NNH2 459 aa8.97□□□□□ -0.97
YBX3-210ENST00000540975 RPL13P26373 211 aaKnown RBP8.97□□□□□ -0.97
YBX3-210ENST00000540975 KCNC1P48547 511 aa8.97□□□□□ -0.97
YBX3-210ENST00000540975 BTBD8Q5XKL5 378 aa8.97□□□□□ -0.97
YBX3-210ENST00000540975 ABHD17CQ6PCB6 329 aa8.97□□□□□ -0.97
YBX3-210ENST00000540975 EP400NLQ6ZTU2 488 aa8.97□□□□□ -0.97
YBX3-210ENST00000540975 LUC7LQ9NQ29 371 aaKnown RBP8.97□□□□□ -0.97
YBX3-210ENST00000540975 SASH1O94885 1247 aa8.96□□□□□ -0.98
YBX3-210ENST00000540975 PRR31Q5SQ13 230 aa8.96□□□□□ -0.98
YBX3-210ENST00000540975 TMC5Q6UXY8 1006 aa8.96□□□□□ -0.98
YBX3-210ENST00000540975 OVCH1Q7RTY7 1134 aa8.96□□□□□ -0.98
YBX3-210ENST00000540975 HOMER1Q86YM7 354 aa8.96□□□□□ -0.98
YBX3-210ENST00000540975 SYNPOQ8N3V7 929 aa8.96□□□□□ -0.98
YBX3-210ENST00000540975 SYT8Q8NBV8 401 aa8.96□□□□□ -0.98
YBX3-210ENST00000540975 TMEM209Q96SK2 561 aa8.96□□□□□ -0.98
YBX3-210ENST00000540975 MRPL42Q9Y6G3 142 aaKnown RBP8.96□□□□□ -0.98
YBX3-210ENST00000540975 ATP23Q9Y6H3 246 aa8.96□□□□□ -0.98
YBX3-210ENST00000540975 KCNK3O14649 394 aa8.95□□□□□ -0.98
YBX3-210ENST00000540975 RFPL3O75679 317 aa8.95□□□□□ -0.98
YBX3-210ENST00000540975 NPTXRO95502 500 aa8.95□□□□□ -0.98
YBX3-210ENST00000540975 PTPN1P18031 435 aaKnown RBP8.95□□□□□ -0.98
YBX3-210ENST00000540975 RTP5Q14D33 572 aa8.95□□□□□ -0.98
YBX3-210ENST00000540975 TCEA2Q15560 299 aa8.95□□□□□ -0.98
YBX3-210ENST00000540975 NOP9Q86U38 636 aaKnown RBP8.95□□□□□ -0.98
YBX3-210ENST00000540975 IGSF22Q8N9C0 903 aa8.95□□□□□ -0.98
YBX3-210ENST00000540975 APPBP2Q92624 585 aa8.95□□□□□ -0.98
YBX3-210ENST00000540975 CLIC6Q96NY7 704 aa8.95□□□□□ -0.98
YBX3-210ENST00000540975 SPATA25Q9BR10 227 aa8.95□□□□□ -0.98
YBX3-210ENST00000540975 RIC8BQ9NVN3 520 aa8.95□□□□□ -0.98
YBX3-210ENST00000540975 FANCLQ9NW38 375 aa8.95□□□□□ -0.98
YBX3-210ENST00000540975 DNAJC8O75937 253 aaPredicted RBP8.94□□□□□ -0.98
YBX3-210ENST00000540975 ENO2P09104 434 aaPredicted RBP8.94□□□□□ -0.98
YBX3-210ENST00000540975 INHBBP09529 407 aa8.94□□□□□ -0.98
YBX3-210ENST00000540975 CD276Q5ZPR3 534 aa8.94□□□□□ -0.98
YBX3-210ENST00000540975 VASNQ6EMK4 673 aa8.94□□□□□ -0.98
YBX3-210ENST00000540975 HHIPL2Q6UWX4 724 aa8.94□□□□□ -0.98
YBX3-210ENST00000540975 TTLL10Q6ZVT0 673 aa8.94□□□□□ -0.98
YBX3-210ENST00000540975 C16orf86Q6ZW13 317 aa8.94□□□□□ -0.98
YBX3-210ENST00000540975 JAZF1Q86VZ6 243 aa8.94□□□□□ -0.98
YBX3-210ENST00000540975 SP8Q8IXZ3 490 aa8.94□□□□□ -0.98
YBX3-210ENST00000540975 CISD2Q8N5K1 135 aaKnown RBP8.94□□□□□ -0.98
YBX3-210ENST00000540975 ZSWIM3Q96MP5 696 aa8.94□□□□□ -0.98
YBX3-210ENST00000540975 XYLT2Q9H1B5 865 aa8.94□□□□□ -0.98
YBX3-210ENST00000540975 DDX3XO00571 662 aaKnown RBP eCLIP8.93□□□□□ -0.98
YBX3-210ENST00000540975 CLASP2O75122 1294 aaKnown RBP8.93□□□□□ -0.98
YBX3-210ENST00000540975 ASLP04424 464 aa8.93□□□□□ -0.98
YBX3-210ENST00000540975 SDSP20132 328 aa8.93□□□□□ -0.98
YBX3-210ENST00000540975 PFKPQ01813 784 aa8.93□□□□□ -0.98
YBX3-210ENST00000540975 PABPC4Q13310 644 aaKnown RBP eCLIP8.93□□□□□ -0.982e-11■■■□□ 14.9
YBX3-210ENST00000540975 FIGNQ5HY92 759 aa8.93□□□□□ -0.98
YBX3-210ENST00000540975 DTX3Q8N9I9 347 aa8.93□□□□□ -0.98
YBX3-210ENST00000540975 FEZF2Q8TBJ5 459 aa8.93□□□□□ -0.98
YBX3-210ENST00000540975 CROTQ9UKG9 612 aa8.93□□□□□ -0.98
YBX3-210ENST00000540975 TNPO3Q9Y5L0 923 aaKnown RBP8.93□□□□□ -0.98
YBX3-210ENST00000540975 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.92□□□□□ -0.98
YBX3-210ENST00000540975 OTOL1A6NHN0 477 aaPredicted RBP8.92□□□□□ -0.98
YBX3-210ENST00000540975 B4E1Z4 1266 aa8.92□□□□□ -0.98
YBX3-210ENST00000540975 HOXA5P20719 270 aa8.92□□□□□ -0.98
YBX3-210ENST00000540975 IL13P35225 146 aa8.92□□□□□ -0.98
YBX3-210ENST00000540975 IGFALSP35858 605 aa8.92□□□□□ -0.98
YBX3-210ENST00000540975 MLLT6P55198 1093 aaPredicted RBP8.92□□□□□ -0.98
YBX3-210ENST00000540975 ZNF761Q86XN6 746 aaPredicted RBP8.92□□□□□ -0.98
YBX3-210ENST00000540975 ZDHHC14Q8IZN3 488 aa8.92□□□□□ -0.98
YBX3-210ENST00000540975 DLL4Q9NR61 685 aa8.92□□□□□ -0.98
YBX3-210ENST00000540975 CD2APQ9Y5K6 639 aa8.92□□□□□ -0.98
YBX3-210ENST00000540975 OPA1O60313 960 aa8.91□□□□□ -0.98
YBX3-210ENST00000540975 CYP7B1O75881 506 aa8.91□□□□□ -0.98
YBX3-210ENST00000540975 GJA4P35212 333 aa8.91□□□□□ -0.98
YBX3-210ENST00000540975 DBPQ10586 325 aaPredicted RBP8.91□□□□□ -0.98
YBX3-210ENST00000540975 SEC23AQ15436 765 aa8.91□□□□□ -0.98
YBX3-210ENST00000540975 C21orf62-AS1Q17RA5 79 aa8.91□□□□□ -0.98
YBX3-210ENST00000540975 TMEM177Q53S58 311 aa8.91□□□□□ -0.98
YBX3-210ENST00000540975 ZCCHC8Q6NZY4 707 aaKnown RBP8.91□□□□□ -0.98
YBX3-210ENST00000540975 DDX53Q86TM3 631 aaKnown RBP8.91□□□□□ -0.98
YBX3-210ENST00000540975 ADAMTS17Q8TE56 1095 aa8.91□□□□□ -0.98
YBX3-210ENST00000540975 ZNF839A8K0R7 811 aa8.9□□□□□ -0.98
YBX3-210ENST00000540975 NOBOXO60393 691 aa8.9□□□□□ -0.98
YBX3-210ENST00000540975 C4BPAP04003 597 aaKnown RBP8.9□□□□□ -0.98
YBX3-210ENST00000540975 ZNF28P17035 718 aa8.9□□□□□ -0.98
YBX3-210ENST00000540975 SKIDA1Q1XH10 827 aa8.9□□□□□ -0.98
YBX3-210ENST00000540975 TKFCQ3LXA3 575 aa8.9□□□□□ -0.98
YBX3-210ENST00000540975 PHF19Q5T6S3 580 aa8.9□□□□□ -0.98
YBX3-210ENST00000540975 PRAMEF18Q5VWM3 479 aa8.9□□□□□ -0.98
YBX3-210ENST00000540975 MCTP2Q6DN12 878 aa8.9□□□□□ -0.98
YBX3-210ENST00000540975 C2orf69Q8N8R5 385 aa8.9□□□□□ -0.98
YBX3-210ENST00000540975 C20orf173Q96LM9 149 aa8.9□□□□□ -0.98
YBX3-210ENST00000540975 SAMD15Q9P1V8 674 aa8.9□□□□□ -0.98
YBX3-210ENST00000540975 RAPGEFL1Q9UHV5 662 aa8.9□□□□□ -0.98
YBX3-210ENST00000540975 SCDO00767 359 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms