RNA–Protein interactions for RNA: ENST00000540896.1

CLTCL1-206, Transcript of clathrin heavy chain like 1, humanhuman

TSL 4

Gene CLTCL1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-206ENST00000540896 CHST13Q8NET6 341 aa7.53□□□□□ -1.2
CLTCL1-206ENST00000540896 REPS2Q8NFH8 660 aa7.53□□□□□ -1.2
CLTCL1-206ENST00000540896 GPRC5AQ8NFJ5 357 aa7.53□□□□□ -1.2
CLTCL1-206ENST00000540896 CLEC4DQ8WXI8 215 aa7.53□□□□□ -1.2
CLTCL1-206ENST00000540896 ITPKCQ96DU7 683 aa7.53□□□□□ -1.2
CLTCL1-206ENST00000540896 C1QTNF2Q9BXJ5 285 aa7.53□□□□□ -1.2
CLTCL1-206ENST00000540896 ANO3Q9BYT9 981 aa7.53□□□□□ -1.2
CLTCL1-206ENST00000540896 R3HDMLQ9H3Y0 253 aa7.53□□□□□ -1.2
CLTCL1-206ENST00000540896 SAGE1Q9NXZ1 904 aa7.53□□□□□ -1.2
CLTCL1-206ENST00000540896 MAP3K20Q9NYL2 800 aaKnown RBP7.53□□□□□ -1.2
CLTCL1-206ENST00000540896 BTBD7Q9P203 1132 aa7.53□□□□□ -1.2
CLTCL1-206ENST00000540896 RBPJLQ9UBG7 517 aa7.53□□□□□ -1.2
CLTCL1-206ENST00000540896 FBXO40Q9UH90 709 aa7.53□□□□□ -1.2
CLTCL1-206ENST00000540896 ZNF214Q9UL59 606 aaPredicted RBP7.53□□□□□ -1.2
CLTCL1-206ENST00000540896 RABGAP1Q9Y3P9 1069 aa7.53□□□□□ -1.2
CLTCL1-206ENST00000540896 RIPK3Q9Y572 518 aa7.53□□□□□ -1.2
CLTCL1-206ENST00000540896 TLR2O60603 784 aa7.52□□□□□ -1.21
CLTCL1-206ENST00000540896 CUTAO60888 179 aa7.52□□□□□ -1.21
CLTCL1-206ENST00000540896 PPP6R2O75170 966 aa7.52□□□□□ -1.21
CLTCL1-206ENST00000540896 MBD3O95983 291 aa7.52□□□□□ -1.21
CLTCL1-206ENST00000540896 MYCLP12524 364 aaPredicted RBP7.52□□□□□ -1.21
CLTCL1-206ENST00000540896 GCFC2P16383 781 aaKnown RBP7.52□□□□□ -1.21
CLTCL1-206ENST00000540896 ERCC3P19447 782 aa7.52□□□□□ -1.21
CLTCL1-206ENST00000540896 HSD17B4P51659 736 aa7.52□□□□□ -1.21
CLTCL1-206ENST00000540896 RPS6P62753 249 aaKnown RBP7.52□□□□□ -1.21
CLTCL1-206ENST00000540896 UBXN2AP68543 259 aa7.52□□□□□ -1.21
CLTCL1-206ENST00000540896 ARHGAP4P98171 946 aa7.52□□□□□ -1.21
CLTCL1-206ENST00000540896 KCTD2Q14681 263 aa7.52□□□□□ -1.21
CLTCL1-206ENST00000540896 PTPAQ15257 358 aa7.52□□□□□ -1.21
CLTCL1-206ENST00000540896 ARHGEF16Q5VV41 709 aa7.52□□□□□ -1.21
CLTCL1-206ENST00000540896 CCDC73Q6ZRK6 1079 aa7.52□□□□□ -1.21
CLTCL1-206ENST00000540896 VASH1Q7L8A9 365 aaPredicted RBP7.52□□□□□ -1.21
CLTCL1-206ENST00000540896 SH3RF1Q7Z6J0 888 aa7.52□□□□□ -1.21
CLTCL1-206ENST00000540896 ANKRD13CQ8N6S4 541 aa7.52□□□□□ -1.21
CLTCL1-206ENST00000540896 FERMT2Q96AC1 680 aa7.52□□□□□ -1.21
CLTCL1-206ENST00000540896 RMDN3Q96TC7 470 aa7.52□□□□□ -1.21
CLTCL1-206ENST00000540896 CFHR5Q9BXR6 569 aa7.52□□□□□ -1.21
CLTCL1-206ENST00000540896 MOV10L1Q9BXT6 1211 aaKnown RBP7.52□□□□□ -1.21
CLTCL1-206ENST00000540896 SLC24A3Q9HC58 644 aa7.52□□□□□ -1.21
CLTCL1-206ENST00000540896 DDX25Q9UHL0 483 aaKnown RBP7.52□□□□□ -1.21
CLTCL1-206ENST00000540896 CPA4Q9UI42 421 aa7.52□□□□□ -1.21
CLTCL1-206ENST00000540896 PCDHA7Q9UN72 937 aa7.52□□□□□ -1.21
CLTCL1-206ENST00000540896 VWA3AA6NCI4 1184 aa7.51□□□□□ -1.21
CLTCL1-206ENST00000540896 LAD1O00515 517 aa7.51□□□□□ -1.21
CLTCL1-206ENST00000540896 CNMDO75829 334 aa7.51□□□□□ -1.21
CLTCL1-206ENST00000540896 TDP2O95551 362 aa7.51□□□□□ -1.21
CLTCL1-206ENST00000540896 FCER1AP12319 257 aa7.51□□□□□ -1.21
CLTCL1-206ENST00000540896 BMP2P12643 396 aa7.51□□□□□ -1.21
CLTCL1-206ENST00000540896 SREBF1P36956 1147 aa7.51□□□□□ -1.21
CLTCL1-206ENST00000540896 ERVK-9P63128 1117 aa7.51□□□□□ -1.21
CLTCL1-206ENST00000540896 ERVK-24P63145 666 aa7.51□□□□□ -1.21
CLTCL1-206ENST00000540896 ORC2Q13416 577 aaPredicted RBP7.51□□□□□ -1.21
CLTCL1-206ENST00000540896 CALCRLQ16602 461 aa7.51□□□□□ -1.21
CLTCL1-206ENST00000540896 TMEM266Q2M3C6 531 aa7.51□□□□□ -1.21
CLTCL1-206ENST00000540896 PRR16Q569H4 304 aa7.51□□□□□ -1.21
CLTCL1-206ENST00000540896 C4orf48Q5BLP8 95 aa7.51□□□□□ -1.21
CLTCL1-206ENST00000540896 ADALQ6DHV7 355 aa7.51□□□□□ -1.21
CLTCL1-206ENST00000540896 PPP4R3AQ6IN85 833 aa7.51□□□□□ -1.21
CLTCL1-206ENST00000540896 C17orf99Q6UX52 265 aa7.51□□□□□ -1.21
CLTCL1-206ENST00000540896 SLC30A10Q6XR72 485 aa7.51□□□□□ -1.21
CLTCL1-206ENST00000540896 DTHD1Q6ZMT9 781 aa7.51□□□□□ -1.21
CLTCL1-206ENST00000540896 FSIP1Q8NA03 581 aa7.51□□□□□ -1.21
CLTCL1-206ENST00000540896 SYTL5Q8TDW5 730 aaPredicted RBP7.51□□□□□ -1.21
CLTCL1-206ENST00000540896 CLIC6Q96NY7 704 aa7.51□□□□□ -1.21
CLTCL1-206ENST00000540896 TAAR1Q96RJ0 339 aa7.51□□□□□ -1.21
CLTCL1-206ENST00000540896 MMP19Q99542 508 aa7.51□□□□□ -1.21
CLTCL1-206ENST00000540896 TSEN34Q9BSV6 310 aaKnown RBP7.51□□□□□ -1.21
CLTCL1-206ENST00000540896 MAF1Q9H063 256 aa7.51□□□□□ -1.21
CLTCL1-206ENST00000540896 MROH8Q9H579 483 aa7.51□□□□□ -1.21
CLTCL1-206ENST00000540896 ZFAND3Q9H8U3 227 aa7.51□□□□□ -1.21
CLTCL1-206ENST00000540896 TXNRD2Q9NNW7 524 aa7.51□□□□□ -1.21
CLTCL1-206ENST00000540896 A1CFQ9NQ94 594 aaKnown RBP7.51□□□□□ -1.21
CLTCL1-206ENST00000540896 FAM13BQ9NYF5 915 aa7.51□□□□□ -1.21
CLTCL1-206ENST00000540896 CDV3Q9UKY7 258 aaKnown RBP7.51□□□□□ -1.21
CLTCL1-206ENST00000540896 SRPRBQ9Y5M8 271 aaKnown RBP7.51□□□□□ -1.21
CLTCL1-206ENST00000540896 MRVI1Q9Y6F6 885 aa7.51□□□□□ -1.21
CLTCL1-206ENST00000540896 PFASO15067 1338 aa7.51□□□□□ -1.21
CLTCL1-206ENST00000540896 MYH6P13533 1939 aa7.5□□□□□ -1.21
CLTCL1-206ENST00000540896 B4DLN1 442 aa7.5□□□□□ -1.21
CLTCL1-206ENST00000540896 GPR25O00155 361 aa7.5□□□□□ -1.21
CLTCL1-206ENST00000540896 FOXN1O15353 648 aa7.5□□□□□ -1.21
CLTCL1-206ENST00000540896 NR3C2P08235 984 aa7.5□□□□□ -1.21
CLTCL1-206ENST00000540896 CYP3A4P08684 503 aa7.5□□□□□ -1.21
CLTCL1-206ENST00000540896 OR52Z1P0C646 297 aa7.5□□□□□ -1.21
CLTCL1-206ENST00000540896 HSPA1AP0DMV8 641 aaKnown RBP7.5□□□□□ -1.21
CLTCL1-206ENST00000540896 HSPA1BP0DMV9 641 aaKnown RBP7.5□□□□□ -1.21
CLTCL1-206ENST00000540896 BCRP11274 1271 aa7.5□□□□□ -1.21
CLTCL1-206ENST00000540896 EIF2AK2P19525 551 aaKnown RBP7.5□□□□□ -1.21
CLTCL1-206ENST00000540896 CMA1P23946 247 aa7.5□□□□□ -1.21
CLTCL1-206ENST00000540896 TXKP42681 527 aa7.5□□□□□ -1.21
CLTCL1-206ENST00000540896 CTCFP49711 727 aaPredicted RBP7.5□□□□□ -1.21
CLTCL1-206ENST00000540896 ATP2C1P98194 919 aaPredicted RBP7.5□□□□□ -1.21
CLTCL1-206ENST00000540896 SP3Q02447 781 aa7.5□□□□□ -1.21
CLTCL1-206ENST00000540896 KLHL40Q2TBA0 621 aa7.5□□□□□ -1.21
CLTCL1-206ENST00000540896 ARL6IP4Q66PJ3 421 aaKnown RBP7.5□□□□□ -1.21
CLTCL1-206ENST00000540896 MOXD1Q6UVY6 613 aa7.5□□□□□ -1.21
CLTCL1-206ENST00000540896 MEIOBQ8N635 442 aa7.5□□□□□ -1.21
CLTCL1-206ENST00000540896 SHCBP1Q8NEM2 672 aa7.5□□□□□ -1.21
CLTCL1-206ENST00000540896 RASSF8Q8NHQ8 419 aa7.5□□□□□ -1.21
CLTCL1-206ENST00000540896 GPT2Q8TD30 523 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms