RNA–Protein interactions for RNA: ENST00000540815.2

LGR5-203, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 1 (best) BASIC

Gene LGR5, Length 2,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-203ENST00000540815 SIK3Q9Y2K2 1263 aa12.52□□□□□ -0.41
LGR5-203ENST00000540815 STK24Q9Y6E0 443 aa12.52□□□□□ -0.41
LGR5-203ENST00000540815 KIF13BQ9NQT8 1826 aa12.52□□□□□ -0.41
LGR5-203ENST00000540815 MAP2K7O14733 419 aa12.52□□□□□ -0.41
LGR5-203ENST00000540815 MED24O75448 989 aa12.52□□□□□ -0.41
LGR5-203ENST00000540815 CIITAP33076 1130 aa12.52□□□□□ -0.41
LGR5-203ENST00000540815 STAT3P40763 770 aa12.52□□□□□ -0.41
LGR5-203ENST00000540815 HERVK_113P62684 666 aa12.52□□□□□ -0.41
LGR5-203ENST00000540815 LRRC41Q15345 812 aa12.52□□□□□ -0.41
LGR5-203ENST00000540815 KIF4BQ2VIQ3 1234 aa12.52□□□□□ -0.41
LGR5-203ENST00000540815 PRR16Q569H4 304 aa12.52□□□□□ -0.41
LGR5-203ENST00000540815 CEP112Q8N8E3 955 aa12.52□□□□□ -0.41
LGR5-203ENST00000540815 RABGGTAQ92696 567 aa12.52□□□□□ -0.41
LGR5-203ENST00000540815 LENG9Q96B70 501 aa12.52□□□□□ -0.41
LGR5-203ENST00000540815 GMLQ99445 158 aa12.52□□□□□ -0.41
LGR5-203ENST00000540815 ARHGEF10LQ9HCE6 1279 aa12.52□□□□□ -0.41
LGR5-203ENST00000540815 PCDHA2Q9Y5H9 948 aa12.52□□□□□ -0.41
LGR5-203ENST00000540815 CLRN2A0PK11 232 aa12.51□□□□□ -0.41
LGR5-203ENST00000540815 SSBP05455 408 aaKnown RBP eCLIP12.51□□□□□ -0.41
LGR5-203ENST00000540815 CHMP4BP1P59074 171 aa12.51□□□□□ -0.41
LGR5-203ENST00000540815 SRGAP1Q7Z6B7 1085 aa12.51□□□□□ -0.41
LGR5-203ENST00000540815 GPBP1Q86WP2 473 aa12.51□□□□□ -0.41
LGR5-203ENST00000540815 CDAN1Q8IWY9 1227 aa12.51□□□□□ -0.41
LGR5-203ENST00000540815 ERMNQ8TAM6 284 aa12.51□□□□□ -0.41
LGR5-203ENST00000540815 FAM151AQ8WW52 585 aa12.51□□□□□ -0.41
LGR5-203ENST00000540815 PRR12Q9ULL5 1215 aa12.51□□□□□ -0.41
LGR5-203ENST00000540815 PITPNM2Q9BZ72 1349 aa12.51□□□□□ -0.41
LGR5-203ENST00000540815 FRMD3A2A2Y4 597 aa12.51□□□□□ -0.41
LGR5-203ENST00000540815 TCP10L2B9ZVM9 353 aa12.51□□□□□ -0.41
LGR5-203ENST00000540815 PIK3CDO00329 1044 aa12.51□□□□□ -0.41
LGR5-203ENST00000540815 RAD17O75943 681 aa12.51□□□□□ -0.41
LGR5-203ENST00000540815 CYP3A4P08684 503 aa12.51□□□□□ -0.41
LGR5-203ENST00000540815 VIL1P09327 827 aaKnown RBP12.51□□□□□ -0.41
LGR5-203ENST00000540815 CYP11B2P19099 503 aa12.51□□□□□ -0.41
LGR5-203ENST00000540815 HNRNPH3P31942 346 aaKnown RBP12.51□□□□□ -0.41
LGR5-203ENST00000540815 ECE1P42892 770 aa12.51□□□□□ -0.41
LGR5-203ENST00000540815 SLC12A3P55017 1021 aa12.51□□□□□ -0.41
LGR5-203ENST00000540815 CORO7P57737 925 aa12.51□□□□□ -0.41
LGR5-203ENST00000540815 TRAF1Q13077 416 aa12.51□□□□□ -0.41
LGR5-203ENST00000540815 POTEAQ6S8J7 498 aa12.51□□□□□ -0.41
LGR5-203ENST00000540815 RTKN2Q8IZC4 609 aa12.51□□□□□ -0.41
LGR5-203ENST00000540815 FAM20AQ96MK3 541 aa12.51□□□□□ -0.41
LGR5-203ENST00000540815 PSMD1Q99460 953 aa12.51□□□□□ -0.41
LGR5-203ENST00000540815 NHEJ1Q9H9Q4 299 aaPredicted RBP12.51□□□□□ -0.41
LGR5-203ENST00000540815 ZNF70Q9UC06 446 aaPredicted RBP12.51□□□□□ -0.41
LGR5-203ENST00000540815 CNTNAP1P78357 1384 aa12.5□□□□□ -0.41
LGR5-203ENST00000540815 PSMD14O00487 310 aa12.5□□□□□ -0.41
LGR5-203ENST00000540815 KCNA3P22001 575 aa12.5□□□□□ -0.41
LGR5-203ENST00000540815 STAT2P52630 851 aa12.5□□□□□ -0.41
LGR5-203ENST00000540815 FKBP3Q00688 224 aaKnown RBP12.5□□□□□ -0.41
LGR5-203ENST00000540815 CCDC84Q86UT8 332 aaPredicted RBP12.5□□□□□ -0.41
LGR5-203ENST00000540815 GSPT2Q8IYD1 628 aaKnown RBP12.5□□□□□ -0.41
LGR5-203ENST00000540815 SPICE1Q8N0Z3 855 aa12.5□□□□□ -0.41
LGR5-203ENST00000540815 CEP63Q96MT8 703 aa12.5□□□□□ -0.41
LGR5-203ENST00000540815 FGFBP2Q9BYJ0 223 aa12.5□□□□□ -0.41
LGR5-203ENST00000540815 HDAC9Q9UKV0 1011 aa12.5□□□□□ -0.41
LGR5-203ENST00000540815 TMX2Q9Y320 296 aa12.5□□□□□ -0.41
LGR5-203ENST00000540815 FAM86B1E9PN63 330 aa12.5□□□□□ -0.41
LGR5-203ENST00000540815 FAM86B2P0C5J1 330 aa12.5□□□□□ -0.41
LGR5-203ENST00000540815 CATSPER3Q86XQ3 398 aa12.5□□□□□ -0.41
LGR5-203ENST00000540815 TTLL6Q8N841 843 aa12.5□□□□□ -0.41
LGR5-203ENST00000540815 ACER1Q8TDN7 264 aa12.5□□□□□ -0.41
LGR5-203ENST00000540815 GOPCQ9HD26 462 aa12.5□□□□□ -0.41
LGR5-203ENST00000540815 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.5□□□□□ -0.41
LGR5-203ENST00000540815 ZBTB12Q9Y330 459 aaPredicted RBP12.5□□□□□ -0.41
LGR5-203ENST00000540815 COL4A3BPQ9Y5P4 624 aa12.5□□□□□ -0.41
LGR5-203ENST00000540815 RPA1P27694 616 aa12.49□□□□□ -0.41
LGR5-203ENST00000540815 TUBB4BP68371 445 aa12.49□□□□□ -0.41
LGR5-203ENST00000540815 DLGAP5Q15398 846 aa12.49□□□□□ -0.41
LGR5-203ENST00000540815 WHAMMP3Q1A5X7 153 aa12.49□□□□□ -0.41
LGR5-203ENST00000540815 SPDYE2Q495Y8 402 aa12.49□□□□□ -0.41
LGR5-203ENST00000540815 NCAPH2Q6IBW4 605 aa12.49□□□□□ -0.41
LGR5-203ENST00000540815 ZNF277Q9NRM2 450 aaPredicted RBP12.49□□□□□ -0.41
LGR5-203ENST00000540815 GUCA1BQ9UMX6 200 aa12.49□□□□□ -0.41
LGR5-203ENST00000540815 ATAD5Q96QE3 1844 aa12.49□□□□□ -0.41
LGR5-203ENST00000540815 NPHP3-ACAD11A0A0J9YXS1 232 aa12.49□□□□□ -0.41
LGR5-203ENST00000540815 POTEFA5A3E0 1075 aa12.49□□□□□ -0.41
LGR5-203ENST00000540815 GNA14O95837 355 aa12.49□□□□□ -0.41
LGR5-203ENST00000540815 POTEIP0CG38 1075 aa12.49□□□□□ -0.41
LGR5-203ENST00000540815 SPATA31C1P0DKV0 1188 aa12.49□□□□□ -0.41
LGR5-203ENST00000540815 CCT5P48643 541 aa12.49□□□□□ -0.41
LGR5-203ENST00000540815 CASP8Q14790 479 aa12.49□□□□□ -0.41
LGR5-203ENST00000540815 ARSHQ5FYA8 562 aa12.49□□□□□ -0.41
LGR5-203ENST00000540815 POTEGQ6S5H5 508 aa12.49□□□□□ -0.41
LGR5-203ENST00000540815 POTEEQ6S8J3 1075 aa12.49□□□□□ -0.41
LGR5-203ENST00000540815 KIAA1328Q86T90 577 aa12.49□□□□□ -0.41
LGR5-203ENST00000540815 PPM1EQ8WY54 764 aa12.49□□□□□ -0.41
LGR5-203ENST00000540815 TRIM10Q9UDY6 481 aa12.49□□□□□ -0.41
LGR5-203ENST00000540815 ZBTB21Q9ULJ3 1066 aa12.49□□□□□ -0.41
LGR5-203ENST00000540815 PLAGL2Q9UPG8 496 aa12.49□□□□□ -0.41
LGR5-203ENST00000540815 MSH4O15457 936 aa12.48□□□□□ -0.41
LGR5-203ENST00000540815 IVLP07476 585 aa12.48□□□□□ -0.41
LGR5-203ENST00000540815 HOXA13P31271 388 aaPredicted RBP12.48□□□□□ -0.41
LGR5-203ENST00000540815 MARSP56192 900 aaKnown RBP12.48□□□□□ -0.41
LGR5-203ENST00000540815 MRPS25P82663 173 aaKnown RBP12.48□□□□□ -0.41
LGR5-203ENST00000540815 AMPD2Q01433 879 aa12.48□□□□□ -0.41
LGR5-203ENST00000540815 HERC4Q5GLZ8 1057 aaPredicted RBP12.48□□□□□ -0.41
LGR5-203ENST00000540815 CCDC122Q5T0U0 273 aa12.48□□□□□ -0.41
LGR5-203ENST00000540815 ZC3H3Q8IXZ2 948 aaKnown RBP12.48□□□□□ -0.41
LGR5-203ENST00000540815 NOA1Q8NC60 698 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms