RNA–Protein interactions for RNA: ENST00000540555.1

TSG101-205, Transcript of tumor susceptibility 101, humanhuman

TSL 2

Gene TSG101, Length 571 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSG101-205ENST00000540555 ATXN3LQ9H3M9 355 aa5□□□□□ -1.61
TSG101-205ENST00000540555 SEMA6CQ9H3T2 930 aa5□□□□□ -1.61
TSG101-205ENST00000540555 GJD2Q9UKL4 321 aa5□□□□□ -1.61
TSG101-205ENST00000540555 RAXQ9Y2V3 346 aa5□□□□□ -1.61
TSG101-205ENST00000540555 SLC45A1Q9Y2W3 748 aa5□□□□□ -1.61
TSG101-205ENST00000540555 RRP7AQ9Y3A4 280 aaKnown RBP5□□□□□ -1.61
TSG101-205ENST00000540555 NUP98P52948 1817 aa5□□□□□ -1.61
TSG101-205ENST00000540555 TRIOO75962 3097 aa4.99□□□□□ -1.61
TSG101-205ENST00000540555 ZFHX2Q9C0A1 2572 aaPredicted RBP4.99□□□□□ -1.61
TSG101-205ENST00000540555 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.99□□□□□ -1.61
TSG101-205ENST00000540555 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.99□□□□□ -1.61
TSG101-205ENST00000540555 CLRN2A0PK11 232 aa4.99□□□□□ -1.61
TSG101-205ENST00000540555 DYNC1LI2O43237 492 aaPredicted RBP4.99□□□□□ -1.61
TSG101-205ENST00000540555 NFICP08651 508 aa4.99□□□□□ -1.61
TSG101-205ENST00000540555 MAP4P27816 1152 aaKnown RBP4.99□□□□□ -1.61
TSG101-205ENST00000540555 CRKP46108 304 aa4.99□□□□□ -1.61
TSG101-205ENST00000540555 USP11P51784 963 aa4.99□□□□□ -1.61
TSG101-205ENST00000540555 KCNQ1P51787 676 aa4.99□□□□□ -1.61
TSG101-205ENST00000540555 EIF4A1P60842 406 aaKnown RBP4.99□□□□□ -1.61
TSG101-205ENST00000540555 TAF7Q15545 349 aaPredicted RBP4.99□□□□□ -1.61
TSG101-205ENST00000540555 SNAP47Q5SQN1 464 aa4.99□□□□□ -1.61
TSG101-205ENST00000540555 ZBTB37Q5TC79 503 aa4.99□□□□□ -1.61
TSG101-205ENST00000540555 TTLL5Q6EMB2 1281 aa4.99□□□□□ -1.61
TSG101-205ENST00000540555 SEZ6L2Q6UXD5 910 aa4.99□□□□□ -1.61
TSG101-205ENST00000540555 BEND4Q6ZU67 534 aa4.99□□□□□ -1.61
TSG101-205ENST00000540555 HDXQ7Z353 690 aa4.99□□□□□ -1.61
TSG101-205ENST00000540555 UBE3DQ7Z6J8 389 aa4.99□□□□□ -1.61
TSG101-205ENST00000540555 CLEC10AQ8IUN9 316 aa4.99□□□□□ -1.61
TSG101-205ENST00000540555 CERS5Q8N5B7 392 aa4.99□□□□□ -1.61
TSG101-205ENST00000540555 ZBTB38Q8NAP3 1195 aaPredicted RBP4.99□□□□□ -1.61
TSG101-205ENST00000540555 TIFAQ96CG3 184 aa4.99□□□□□ -1.61
TSG101-205ENST00000540555 FAM83CQ9BQN1 747 aa4.99□□□□□ -1.61
TSG101-205ENST00000540555 SPON2Q9BUD6 331 aa4.99□□□□□ -1.61
TSG101-205ENST00000540555 ISCA1Q9BUE6 129 aa4.99□□□□□ -1.61
TSG101-205ENST00000540555 NT5C1AQ9BXI3 368 aa4.99□□□□□ -1.61
TSG101-205ENST00000540555 LRRC3Q9BY71 257 aa4.99□□□□□ -1.61
TSG101-205ENST00000540555 UBP1Q9NZI7 540 aa4.99□□□□□ -1.61
TSG101-205ENST00000540555 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.99□□□□□ -1.61
TSG101-205ENST00000540555 SUPT16HQ9Y5B9 1047 aaKnown RBP4.99□□□□□ -1.61
TSG101-205ENST00000540555 PCDHAC2Q9Y5I4 1007 aa4.99□□□□□ -1.61
TSG101-205ENST00000540555 LAMB2P55268 1798 aa4.99□□□□□ -1.61
TSG101-205ENST00000540555 DDX60LQ5H9U9 1706 aaKnown RBP4.98□□□□□ -1.61
TSG101-205ENST00000540555 HMX2A2RU54 273 aa4.98□□□□□ -1.61
TSG101-205ENST00000540555 FANCGO15287 622 aa4.98□□□□□ -1.61
TSG101-205ENST00000540555 DYRK3O43781 588 aa4.98□□□□□ -1.61
TSG101-205ENST00000540555 KRT37O76014 449 aa4.98□□□□□ -1.61
TSG101-205ENST00000540555 CYP2C8P10632 490 aa4.98□□□□□ -1.61
TSG101-205ENST00000540555 POU3F3P20264 500 aaPredicted RBP4.98□□□□□ -1.61
TSG101-205ENST00000540555 TFF2Q03403 129 aa4.98□□□□□ -1.61
TSG101-205ENST00000540555 MPP2Q14168 576 aa4.98□□□□□ -1.61
TSG101-205ENST00000540555 SNX17Q15036 470 aa4.98□□□□□ -1.61
TSG101-205ENST00000540555 CFAP100Q494V2 611 aa4.98□□□□□ -1.61
TSG101-205ENST00000540555 SMYD4Q8IYR2 804 aaPredicted RBP4.98□□□□□ -1.61
TSG101-205ENST00000540555 ZNF654Q8IZM8 581 aa4.98□□□□□ -1.61
TSG101-205ENST00000540555 PNISRQ8TF01 805 aaKnown RBP4.98□□□□□ -1.61
TSG101-205ENST00000540555 HERVK_113Q902F9 699 aa4.98□□□□□ -1.61
TSG101-205ENST00000540555 ISL2Q96A47 359 aa4.98□□□□□ -1.61
TSG101-205ENST00000540555 ELMO3Q96BJ8 720 aa4.98□□□□□ -1.61
TSG101-205ENST00000540555 COA7Q96BR5 231 aa4.98□□□□□ -1.61
TSG101-205ENST00000540555 PHACTR3Q96KR7 559 aa4.98□□□□□ -1.61
TSG101-205ENST00000540555 TGIF2Q9GZN2 237 aa4.98□□□□□ -1.61
TSG101-205ENST00000540555 WNT10AQ9GZT5 417 aa4.98□□□□□ -1.61
TSG101-205ENST00000540555 KCNF1Q9H3M0 494 aa4.98□□□□□ -1.61
TSG101-205ENST00000540555 C7orf69Q9H7B7 122 aa4.98□□□□□ -1.61
TSG101-205ENST00000540555 PRKAG2Q9UGJ0 569 aa4.98□□□□□ -1.61
TSG101-205ENST00000540555 POLR3KQ9Y2Y1 108 aaPredicted RBP4.98□□□□□ -1.61
TSG101-205ENST00000540555 TACC3Q9Y6A5 838 aa4.98□□□□□ -1.61
TSG101-205ENST00000540555 RPAP1Q9BWH6 1393 aaPredicted RBP4.98□□□□□ -1.61
TSG101-205ENST00000540555 UNC79Q9P2D8 2635 aa4.98□□□□□ -1.61
TSG101-205ENST00000540555 ANKRD11Q6UB99 2663 aaPredicted RBP4.98□□□□□ -1.61
TSG101-205ENST00000540555 VPS13AQ96RL7 3174 aa4.98□□□□□ -1.61
TSG101-205ENST00000540555 OTOFQ9HC10 1997 aa4.97□□□□□ -1.61
TSG101-205ENST00000540555 FAM95CA0A1B0GW59 222 aa4.97□□□□□ -1.61
TSG101-205ENST00000540555 CXCL11O14625 94 aa4.97□□□□□ -1.61
TSG101-205ENST00000540555 TLR3O15455 904 aaKnown RBP4.97□□□□□ -1.61
TSG101-205ENST00000540555 RNGTTO60942 597 aaKnown RBP4.97□□□□□ -1.61
TSG101-205ENST00000540555 RAB6AP20340 208 aa4.97□□□□□ -1.61
TSG101-205ENST00000540555 ERCC5P28715 1186 aaPredicted RBP4.97□□□□□ -1.61
TSG101-205ENST00000540555 EPHB4P54760 987 aa4.97□□□□□ -1.61
TSG101-205ENST00000540555 RTP1P59025 263 aa4.97□□□□□ -1.61
TSG101-205ENST00000540555 NFKBIBQ15653 356 aa4.97□□□□□ -1.61
TSG101-205ENST00000540555 NOL9Q5SY16 702 aaKnown RBP4.97□□□□□ -1.61
TSG101-205ENST00000540555 MCM10Q7L590 875 aa4.97□□□□□ -1.61
TSG101-205ENST00000540555 COPS6Q7L5N1 327 aa4.97□□□□□ -1.61
TSG101-205ENST00000540555 REC114Q7Z4M0 266 aa4.97□□□□□ -1.61
TSG101-205ENST00000540555 KRTAP19-1Q8IUB9 90 aa4.97□□□□□ -1.61
TSG101-205ENST00000540555 SLITRK4Q8IW52 837 aa4.97□□□□□ -1.61
TSG101-205ENST00000540555 SHISA5Q8N114 240 aa4.97□□□□□ -1.61
TSG101-205ENST00000540555 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.97□□□□□ -1.61
TSG101-205ENST00000540555 PPM1EQ8WY54 764 aa4.97□□□□□ -1.61
TSG101-205ENST00000540555 TRIB2Q92519 343 aa4.97□□□□□ -1.61
TSG101-205ENST00000540555 GATA6Q92908 595 aa4.97□□□□□ -1.61
TSG101-205ENST00000540555 BADQ92934 168 aa4.97□□□□□ -1.61
TSG101-205ENST00000540555 ZKSCAN4Q969J2 545 aaPredicted RBP4.97□□□□□ -1.61
TSG101-205ENST00000540555 FAM89AQ96GI7 184 aa4.97□□□□□ -1.61
TSG101-205ENST00000540555 RNPC3Q96LT9 517 aaKnown RBP4.97□□□□□ -1.61
TSG101-205ENST00000540555 ACBD3Q9H3P7 528 aa4.97□□□□□ -1.61
TSG101-205ENST00000540555 PRDM12Q9H4Q4 367 aa4.97□□□□□ -1.61
TSG101-205ENST00000540555 VEZTQ9HBM0 779 aa4.97□□□□□ -1.61
TSG101-205ENST00000540555 CD320Q9NPF0 282 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms