RNA–Protein interactions for RNA: ENST00000540504.2

PSMD3-204, Transcript of proteasome 26S subunit, non-ATPase 3, humanhuman

TSL 3

Gene PSMD3, Length 458 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD3-204ENST00000540504 PPP1R18Q6NYC8 613 aa19.16■□□□□ 0.66
PSMD3-204ENST00000540504 TRIM50Q86XT4 487 aa19.16■□□□□ 0.66
PSMD3-204ENST00000540504 ZNF713Q8N859 430 aaPredicted RBP19.16■□□□□ 0.66
PSMD3-204ENST00000540504 IL27Q8NEV9 243 aa19.16■□□□□ 0.66
PSMD3-204ENST00000540504 SEPT8Q92599 483 aa19.16■□□□□ 0.66
PSMD3-204ENST00000540504 JADE2Q9NQC1 790 aa19.16■□□□□ 0.66
PSMD3-204ENST00000540504 INSL6Q9Y581 213 aa19.16■□□□□ 0.66
PSMD3-204ENST00000540504 CNTNAP5Q8WYK1 1306 aa19.16■□□□□ 0.66
PSMD3-204ENST00000540504 ZBTB43O43298 467 aa19.15■□□□□ 0.66
PSMD3-204ENST00000540504 ERVK-21P61565 698 aa19.15■□□□□ 0.66
PSMD3-204ENST00000540504 ARHGAP4P98171 946 aa19.15■□□□□ 0.66
PSMD3-204ENST00000540504 GRB10Q13322 594 aa19.15■□□□□ 0.66
PSMD3-204ENST00000540504 RTN1Q16799 776 aa19.15■□□□□ 0.66
PSMD3-204ENST00000540504 FAM26DQ5JW98 314 aa19.15■□□□□ 0.66
PSMD3-204ENST00000540504 TMCO2Q7Z6W1 182 aaPredicted RBP19.15■□□□□ 0.66
PSMD3-204ENST00000540504 RPAINQ86UA6 219 aa19.15■□□□□ 0.66
PSMD3-204ENST00000540504 LMBR1Q8WVP7 490 aa19.15■□□□□ 0.66
PSMD3-204ENST00000540504 APBB2Q92870 758 aa19.15■□□□□ 0.66
PSMD3-204ENST00000540504 TGS1Q96RS0 853 aaKnown RBP19.15■□□□□ 0.66
PSMD3-204ENST00000540504 ERAP1Q9NZ08 941 aa19.15■□□□□ 0.66
PSMD3-204ENST00000540504 SPTBN5Q9NRC6 3674 aaKnown RBP19.14■□□□□ 0.65
PSMD3-204ENST00000540504 TNFRSF10AO00220 468 aa19.14■□□□□ 0.65
PSMD3-204ENST00000540504 FOSP01100 380 aaPredicted RBP19.14■□□□□ 0.65
PSMD3-204ENST00000540504 NAPAP54920 295 aa19.14■□□□□ 0.65
PSMD3-204ENST00000540504 FUT2Q10981 343 aa19.14■□□□□ 0.65
PSMD3-204ENST00000540504 SKIV2LQ15477 1246 aaKnown RBP19.14■□□□□ 0.65
PSMD3-204ENST00000540504 WWC2Q6AWC2 1192 aa19.14■□□□□ 0.65
PSMD3-204ENST00000540504 TAF2Q6P1X5 1199 aa19.14■□□□□ 0.65
PSMD3-204ENST00000540504 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.14■□□□□ 0.651e-6■■■■□ 21.3
PSMD3-204ENST00000540504 GLT8D2Q9H1C3 349 aa19.14■□□□□ 0.65
PSMD3-204ENST00000540504 SMARCAD1Q9H4L7 1026 aa19.14■□□□□ 0.65
PSMD3-204ENST00000540504 RIC8AQ9NPQ8 531 aa19.14■□□□□ 0.65
PSMD3-204ENST00000540504 COG5Q9UP83 839 aa19.14■□□□□ 0.65
PSMD3-204ENST00000540504 TELO2Q9Y4R8 837 aa19.14■□□□□ 0.65
PSMD3-204ENST00000540504 PRRC2BQ5JSZ5 2229 aaKnown RBP19.14■□□□□ 0.65
PSMD3-204ENST00000540504 REV3LO60673 3130 aa19.13■□□□□ 0.65
PSMD3-204ENST00000540504 GSTTP1A0A1W2PQM5 241 aa19.13■□□□□ 0.65
PSMD3-204ENST00000540504 LINC01553A4QN01 128 aa19.13■□□□□ 0.65
PSMD3-204ENST00000540504 HTRA4P83105 476 aaPredicted RBP19.13■□□□□ 0.65
PSMD3-204ENST00000540504 ADCK5Q3MIX3 580 aa19.13■□□□□ 0.65
PSMD3-204ENST00000540504 SKAP1Q86WV1 359 aa19.13■□□□□ 0.65
PSMD3-204ENST00000540504 RASEFQ8IZ41 740 aa19.13■□□□□ 0.65
PSMD3-204ENST00000540504 MYOCDQ8IZQ8 938 aa19.13■□□□□ 0.65
PSMD3-204ENST00000540504 ADAMTS19Q8TE59 1207 aa19.13■□□□□ 0.65
PSMD3-204ENST00000540504 MXRA8Q9BRK3 442 aa19.13■□□□□ 0.65
PSMD3-204ENST00000540504 BRPF3Q9ULD4 1205 aa19.13■□□□□ 0.65
PSMD3-204ENST00000540504 COL4A4P53420 1690 aaPredicted RBP19.13■□□□□ 0.65
PSMD3-204ENST00000540504 SIP14410 1827 aa19.13■□□□□ 0.65
PSMD3-204ENST00000540504 GOLGA8AA7E2F4 631 aa19.12■□□□□ 0.65
PSMD3-204ENST00000540504 GOLGA8BA8MQT2 603 aa19.12■□□□□ 0.65
PSMD3-204ENST00000540504 LPXNO60711 386 aa19.12■□□□□ 0.65
PSMD3-204ENST00000540504 RPLP2P05387 115 aaKnown RBP19.12■□□□□ 0.65
PSMD3-204ENST00000540504 CTSHP09668 335 aa19.12■□□□□ 0.65
PSMD3-204ENST00000540504 PPFIA1Q13136 1202 aa19.12■□□□□ 0.65
PSMD3-204ENST00000540504 SPRED2Q7Z698 418 aa19.12■□□□□ 0.65
PSMD3-204ENST00000540504 RSPH3Q86UC2 560 aa19.12■□□□□ 0.65
PSMD3-204ENST00000540504 GLG1Q92896 1179 aa19.12■□□□□ 0.65
PSMD3-204ENST00000540504 TNPO1Q92973 898 aaKnown RBP19.12■□□□□ 0.65
PSMD3-204ENST00000540504 TCEANC2Q96MN5 208 aa19.12■□□□□ 0.65
PSMD3-204ENST00000540504 BARHL2Q9NY43 387 aa19.12■□□□□ 0.65
PSMD3-204ENST00000540504 V9GY48 417 aaPredicted RBP19.12■□□□□ 0.65
PSMD3-204ENST00000540504 NFASCO94856 1347 aa19.11■□□□□ 0.65
PSMD3-204ENST00000540504 KLF18A0A0U1RQI7 1052 aa19.11■□□□□ 0.65
PSMD3-204ENST00000540504 CCDC196A0A1B0GTZ2 297 aa19.11■□□□□ 0.65
PSMD3-204ENST00000540504 ADCY7P51828 1080 aa19.11■□□□□ 0.65
PSMD3-204ENST00000540504 AP3B2Q13367 1082 aa19.11■□□□□ 0.65
PSMD3-204ENST00000540504 TYW1BQ6NUM6 668 aa19.11■□□□□ 0.65
PSMD3-204ENST00000540504 FAM117BQ6P1L5 589 aa19.11■□□□□ 0.65
PSMD3-204ENST00000540504 SP7Q8TDD2 431 aaPredicted RBP19.11■□□□□ 0.65
PSMD3-204ENST00000540504 TOP1MTQ969P6 601 aa19.11■□□□□ 0.65
PSMD3-204ENST00000540504 SAMD11Q96NU1 681 aa19.11■□□□□ 0.65
PSMD3-204ENST00000540504 SUGCTQ9HAC7 445 aa19.11■□□□□ 0.65
PSMD3-204ENST00000540504 JPH1Q9HDC5 661 aaPredicted RBP19.11■□□□□ 0.65
PSMD3-204ENST00000540504 KCNH7Q9NS40 1196 aa19.11■□□□□ 0.65
PSMD3-204ENST00000540504 SLC9A2Q9UBY0 812 aa19.11■□□□□ 0.65
PSMD3-204ENST00000540504 MBLAC1A4D2B0 266 aaPredicted RBP19.1■□□□□ 0.65
PSMD3-204ENST00000540504 SMCO2A6NFE2 343 aa19.1■□□□□ 0.65
PSMD3-204ENST00000540504 RRN3P2A6NIE6 340 aa19.1■□□□□ 0.65
PSMD3-204ENST00000540504 STXBP3O00186 592 aa19.1■□□□□ 0.65
PSMD3-204ENST00000540504 GRIK4Q16099 956 aa19.1■□□□□ 0.65
PSMD3-204ENST00000540504 KRT40Q6A162 431 aa19.1■□□□□ 0.65
PSMD3-204ENST00000540504 KCNB2Q92953 911 aa19.1■□□□□ 0.65
PSMD3-204ENST00000540504 UHRF1Q96T88 793 aaPredicted RBP19.1■□□□□ 0.65
PSMD3-204ENST00000540504 SDF4Q9BRK5 362 aa19.1■□□□□ 0.65
PSMD3-204ENST00000540504 ANO3Q9BYT9 981 aa19.1■□□□□ 0.65
PSMD3-204ENST00000540504 IFIH1Q9BYX4 1025 aaKnown RBP19.1■□□□□ 0.65
PSMD3-204ENST00000540504 AZI2Q9H6S1 392 aa19.1■□□□□ 0.65
PSMD3-204ENST00000540504 FAM217BQ9NTX9 383 aaPredicted RBP19.1■□□□□ 0.65
PSMD3-204ENST00000540504 PKD2L1Q9P0L9 805 aa19.1■□□□□ 0.65
PSMD3-204ENST00000540504 TUBE1Q9UJT0 475 aa19.1■□□□□ 0.65
PSMD3-204ENST00000540504 COL4A6Q14031 1691 aa19.09■□□□□ 0.65
PSMD3-204ENST00000540504 CHRNA1P02708 482 aa19.09■□□□□ 0.65
PSMD3-204ENST00000540504 BMP1P13497 986 aa19.09■□□□□ 0.65
PSMD3-204ENST00000540504 MARK3P27448 753 aa19.09■□□□□ 0.65
PSMD3-204ENST00000540504 SREBF1P36956 1147 aa19.09■□□□□ 0.65
PSMD3-204ENST00000540504 CLK2P49760 499 aaKnown RBP19.09■□□□□ 0.65
PSMD3-204ENST00000540504 FGD1P98174 961 aa19.09■□□□□ 0.65
PSMD3-204ENST00000540504 CEP55Q53EZ4 464 aa19.09■□□□□ 0.65
PSMD3-204ENST00000540504 GDPD5Q8WTR4 605 aa19.09■□□□□ 0.65
PSMD3-204ENST00000540504 HLA-CQ95604 372 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms