RNA–Protein interactions for RNA: ENST00000540469.5

SFSWAP-209, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 3,536 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-209ENST00000540469 NSRP1Q9H0G5 558 aaKnown RBP14.04□□□□□ -0.16
SFSWAP-209ENST00000540469 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.04□□□□□ -0.16
SFSWAP-209ENST00000540469 ENO4A6NNW6 628 aa14.03□□□□□ -0.16
SFSWAP-209ENST00000540469 DIAPH2O60879 1101 aa14.03□□□□□ -0.16
SFSWAP-209ENST00000540469 CHN1P15882 459 aa14.03□□□□□ -0.16
SFSWAP-209ENST00000540469 DRD4P21917 467 aa14.03□□□□□ -0.16
SFSWAP-209ENST00000540469 CENPPQ6IPU0 288 aa14.03□□□□□ -0.16
SFSWAP-209ENST00000540469 NELFCDQ8IXH7 590 aa14.03□□□□□ -0.16
SFSWAP-209ENST00000540469 KIF9Q9HAQ2 790 aa14.03□□□□□ -0.16
SFSWAP-209ENST00000540469 INTS9Q9NV88 658 aaKnown RBP14.03□□□□□ -0.16
SFSWAP-209ENST00000540469 NOP53Q9NZM5 478 aaKnown RBP14.03□□□□□ -0.16
SFSWAP-209ENST00000540469 ZBTB12Q9Y330 459 aaPredicted RBP14.03□□□□□ -0.16
SFSWAP-209ENST00000540469 MYH2Q9UKX2 1941 aa14.03□□□□□ -0.16
SFSWAP-209ENST00000540469 FGFR2P21802 821 aa14.03□□□□□ -0.16
SFSWAP-209ENST00000540469 LACTB2Q53H82 288 aaPredicted RBP14.03□□□□□ -0.16
SFSWAP-209ENST00000540469 SOGA3Q5TF21 947 aa14.03□□□□□ -0.16
SFSWAP-209ENST00000540469 LRRC15Q8TF66 581 aa14.03□□□□□ -0.16
SFSWAP-209ENST00000540469 PBKQ96KB5 322 aa14.03□□□□□ -0.16
SFSWAP-209ENST00000540469 PCDHA6Q9UN73 950 aa14.03□□□□□ -0.16
SFSWAP-209ENST00000540469 PCDHA8Q9Y5H6 950 aa14.03□□□□□ -0.16
SFSWAP-209ENST00000540469 LRP6O75581 1613 aa14.03□□□□□ -0.16
SFSWAP-209ENST00000540469 EME2A4GXA9 379 aaPredicted RBP14.03□□□□□ -0.16
SFSWAP-209ENST00000540469 RGS16O15492 202 aaPredicted RBP14.03□□□□□ -0.16
SFSWAP-209ENST00000540469 SLC8A3P57103 927 aa14.03□□□□□ -0.16
SFSWAP-209ENST00000540469 SEMA3FQ13275 785 aa14.03□□□□□ -0.16
SFSWAP-209ENST00000540469 HGSNATQ68CP4 663 aa14.03□□□□□ -0.16
SFSWAP-209ENST00000540469 AK8Q96MA6 479 aa14.03□□□□□ -0.16
SFSWAP-209ENST00000540469 FMO2Q99518 471 aa14.03□□□□□ -0.16
SFSWAP-209ENST00000540469 STX8Q9UNK0 236 aa14.03□□□□□ -0.16
SFSWAP-209ENST00000540469 RGPD5Q99666 1765 aa14.02□□□□□ -0.16
SFSWAP-209ENST00000540469 GHRP10912 638 aa14.02□□□□□ -0.16
SFSWAP-209ENST00000540469 GYG1P46976 350 aa14.02□□□□□ -0.16
SFSWAP-209ENST00000540469 CAPRIN2Q6IMN6 1127 aaKnown RBP14.02□□□□□ -0.16
SFSWAP-209ENST00000540469 VAT1LQ9HCJ6 419 aa14.02□□□□□ -0.16
SFSWAP-209ENST00000540469 ANAPC4Q9UJX5 808 aa14.02□□□□□ -0.16
SFSWAP-209ENST00000540469 UBAP1LF5GYI3 381 aa14.02□□□□□ -0.17
SFSWAP-209ENST00000540469 LAD1O00515 517 aa14.02□□□□□ -0.17
SFSWAP-209ENST00000540469 CAND2O75155 1236 aa14.02□□□□□ -0.17
SFSWAP-209ENST00000540469 EVX2Q03828 476 aa14.02□□□□□ -0.17
SFSWAP-209ENST00000540469 LRRC63Q05C16 580 aa14.02□□□□□ -0.17
SFSWAP-209ENST00000540469 AP1ARQ63HQ0 302 aa14.02□□□□□ -0.17
SFSWAP-209ENST00000540469 DENND2CQ68D51 928 aa14.02□□□□□ -0.17
SFSWAP-209ENST00000540469 RCSD1Q6JBY9 416 aa14.02□□□□□ -0.17
SFSWAP-209ENST00000540469 PNMA1Q8ND90 353 aa14.02□□□□□ -0.17
SFSWAP-209ENST00000540469 MGARPQ8TDB4 240 aa14.02□□□□□ -0.17
SFSWAP-209ENST00000540469 SAAL1Q96ER3 474 aa14.02□□□□□ -0.17
SFSWAP-209ENST00000540469 PLCD4Q9BRC7 762 aa14.02□□□□□ -0.17
SFSWAP-209ENST00000540469 BATF3Q9NR55 127 aa14.02□□□□□ -0.17
SFSWAP-209ENST00000540469 C15orf41Q9Y2V0 281 aa14.02□□□□□ -0.17
SFSWAP-209ENST00000540469 PCDHGC5Q9Y5F6 944 aa14.02□□□□□ -0.17
SFSWAP-209ENST00000540469 COL4A3BPQ9Y5P4 624 aa14.02□□□□□ -0.17
SFSWAP-209ENST00000540469 TJP1Q07157 1748 aa14.02□□□□□ -0.17
SFSWAP-209ENST00000540469 TNS3Q68CZ2 1445 aa14.02□□□□□ -0.17
SFSWAP-209ENST00000540469 GOLGA6L10A0A0M3HER8 536 aa14.02□□□□□ -0.17
SFSWAP-209ENST00000540469 MYBL1P10243 752 aa14.02□□□□□ -0.17
SFSWAP-209ENST00000540469 ITGA4P13612 1032 aa14.02□□□□□ -0.17
SFSWAP-209ENST00000540469 NONOQ15233 471 aaKnown RBP eCLIP14.02□□□□□ -0.179e-7■■■□□ 18.5
SFSWAP-209ENST00000540469 LMBR1Q8WVP7 490 aa14.02□□□□□ -0.17
SFSWAP-209ENST00000540469 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.02□□□□□ -0.173e-6■□□□□ 9.9
SFSWAP-209ENST00000540469 TRIM51Q9BSJ1 452 aa14.02□□□□□ -0.17
SFSWAP-209ENST00000540469 FAM129AQ9BZQ8 928 aa14.02□□□□□ -0.17
SFSWAP-209ENST00000540469 YIPF3Q9GZM5 350 aa14.02□□□□□ -0.17
SFSWAP-209ENST00000540469 H0YGN5 161 aa14.01□□□□□ -0.17
SFSWAP-209ENST00000540469 SLCO1A2P46721 670 aa14.01□□□□□ -0.17
SFSWAP-209ENST00000540469 ASTE1Q2TB18 679 aaPredicted RBP14.01□□□□□ -0.17
SFSWAP-209ENST00000540469 TMC3Q7Z5M5 1100 aa14.01□□□□□ -0.17
SFSWAP-209ENST00000540469 LRRC34Q8IZ02 419 aa14.01□□□□□ -0.17
SFSWAP-209ENST00000540469 MYOCDQ8IZQ8 938 aa14.01□□□□□ -0.17
SFSWAP-209ENST00000540469 LARP4BQ92615 738 aaKnown RBP14.01□□□□□ -0.17
SFSWAP-209ENST00000540469 FAM167BQ9BTA0 163 aa14.01□□□□□ -0.17
SFSWAP-209ENST00000540469 ASAP1Q9ULH1 1129 aa14.01□□□□□ -0.17
SFSWAP-209ENST00000540469 TRPC6Q9Y210 931 aa14.01□□□□□ -0.17
SFSWAP-209ENST00000540469 NFS1Q9Y697 457 aa14.01□□□□□ -0.17
SFSWAP-209ENST00000540469 PKD1L3Q7Z443 1732 aa14.01□□□□□ -0.17
SFSWAP-209ENST00000540469 C5orf60A6NFR6 353 aa14.01□□□□□ -0.17
SFSWAP-209ENST00000540469 MYMKA6NI61 221 aa14.01□□□□□ -0.17
SFSWAP-209ENST00000540469 GOLGA8HP0CJ92 632 aa14.01□□□□□ -0.17
SFSWAP-209ENST00000540469 CYP2D6P10635 497 aa14.01□□□□□ -0.17
SFSWAP-209ENST00000540469 BYSLQ13895 437 aaKnown RBP14.01□□□□□ -0.17
SFSWAP-209ENST00000540469 TMEM266Q2M3C6 531 aa14.01□□□□□ -0.17
SFSWAP-209ENST00000540469 UNC13DQ70J99 1090 aa14.01□□□□□ -0.17
SFSWAP-209ENST00000540469 TRPM8Q7Z2W7 1104 aa14.01□□□□□ -0.17
SFSWAP-209ENST00000540469 CCHCR1Q8TD31 782 aa14.01□□□□□ -0.17
SFSWAP-209ENST00000540469 EDEM3Q9BZQ6 932 aa14.01□□□□□ -0.17
SFSWAP-209ENST00000540469 FAM114A2Q9NRY5 505 aa14.01□□□□□ -0.17
SFSWAP-209ENST00000540469 F8VZ95 297 aa14.01□□□□□ -0.17
SFSWAP-209ENST00000540469 KIF3CO14782 793 aa14.01□□□□□ -0.17
SFSWAP-209ENST00000540469 TLR2O60603 784 aa14.01□□□□□ -0.17
SFSWAP-209ENST00000540469 FKBP3Q00688 224 aaKnown RBP14.01□□□□□ -0.17
SFSWAP-209ENST00000540469 TFAP4Q01664 338 aa14.01□□□□□ -0.17
SFSWAP-209ENST00000540469 TLDC1Q6P9B6 456 aa14.01□□□□□ -0.17
SFSWAP-209ENST00000540469 DZIP3Q86Y13 1208 aaKnown RBP14.01□□□□□ -0.17
SFSWAP-209ENST00000540469 GUF1Q8N442 669 aaKnown RBP14.01□□□□□ -0.17
SFSWAP-209ENST00000540469 METTL13Q8N6R0 699 aa14.01□□□□□ -0.17
SFSWAP-209ENST00000540469 KLHL29Q96CT2 875 aa14.01□□□□□ -0.17
SFSWAP-209ENST00000540469 PRMT1Q99873 361 aaKnown RBP14.01□□□□□ -0.17
SFSWAP-209ENST00000540469 MKNK2Q9HBH9 465 aa14.01□□□□□ -0.17
SFSWAP-209ENST00000540469 PRDM11Q9NQV5 511 aa14.01□□□□□ -0.17
SFSWAP-209ENST00000540469 SPDYE3A6NKU9 549 aa14□□□□□ -0.17
SFSWAP-209ENST00000540469 CCDC188H7C350 402 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms