RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 IFIH1Q9BYX4 1025 aaKnown RBP13.82□□□□□ -0.2
CBX3P4-202ENST00000540428 RBM8AQ9Y5S9 174 aaKnown RBP13.82□□□□□ -0.2
CBX3P4-202ENST00000540428 SIP14410 1827 aa13.81□□□□□ -0.2
CBX3P4-202ENST00000540428 RPLP2P05387 115 aaKnown RBP13.81□□□□□ -0.2
CBX3P4-202ENST00000540428 CALM1P0DP23 149 aa13.81□□□□□ -0.2
CBX3P4-202ENST00000540428 CALM2P0DP24 149 aa13.81□□□□□ -0.2
CBX3P4-202ENST00000540428 CALM3P0DP25 149 aa13.81□□□□□ -0.2
CBX3P4-202ENST00000540428 MCM5P33992 734 aa13.81□□□□□ -0.2
CBX3P4-202ENST00000540428 LIFRP42702 1097 aa13.81□□□□□ -0.2
CBX3P4-202ENST00000540428 TMEM31Q5JXX7 168 aa13.81□□□□□ -0.2
CBX3P4-202ENST00000540428 TMEM192Q8IY95 271 aa13.81□□□□□ -0.2
CBX3P4-202ENST00000540428 SEPT1Q8WYJ6 367 aa13.81□□□□□ -0.2
CBX3P4-202ENST00000540428 LRFN3Q9BTN0 628 aa13.81□□□□□ -0.2
CBX3P4-202ENST00000540428 MYL10Q9BUA6 226 aa13.81□□□□□ -0.2
CBX3P4-202ENST00000540428 MICAL3Q7RTP6 2002 aa13.8□□□□□ -0.2
CBX3P4-202ENST00000540428 PI4K2BG5E9Z4 385 aa13.8□□□□□ -0.2
CBX3P4-202ENST00000540428 SH2B2O14492 632 aaPredicted RBP13.8□□□□□ -0.2
CBX3P4-202ENST00000540428 MAFGO15525 162 aa13.8□□□□□ -0.2
CBX3P4-202ENST00000540428 PRC1O43663 620 aa13.8□□□□□ -0.2
CBX3P4-202ENST00000540428 GPR37L1O60883 481 aa13.8□□□□□ -0.2
CBX3P4-202ENST00000540428 UPP2O95045 317 aa13.8□□□□□ -0.2
CBX3P4-202ENST00000540428 KCNA2P16389 499 aa13.8□□□□□ -0.2
CBX3P4-202ENST00000540428 KCNA5P22460 613 aa13.8□□□□□ -0.2
CBX3P4-202ENST00000540428 TCF7P36402 384 aaPredicted RBP13.8□□□□□ -0.2
CBX3P4-202ENST00000540428 GPM6BQ13491 265 aa13.8□□□□□ -0.2
CBX3P4-202ENST00000540428 RSPH3Q86UC2 560 aa13.8□□□□□ -0.2
CBX3P4-202ENST00000540428 SRBD1Q8N5C6 995 aaKnown RBP13.8□□□□□ -0.2
CBX3P4-202ENST00000540428 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.8□□□□□ -0.2
CBX3P4-202ENST00000540428 NEK9Q8TD19 979 aa13.8□□□□□ -0.2
CBX3P4-202ENST00000540428 FAM122AQ96E09 287 aa13.8□□□□□ -0.2
CBX3P4-202ENST00000540428 OSBPL7Q9BZF2 842 aa13.8□□□□□ -0.2
CBX3P4-202ENST00000540428 PSTPIP2Q9H939 334 aa13.8□□□□□ -0.2
CBX3P4-202ENST00000540428 EHMT1Q9H9B1 1298 aa13.8□□□□□ -0.2
CBX3P4-202ENST00000540428 ERAP1Q9NZ08 941 aa13.8□□□□□ -0.2
CBX3P4-202ENST00000540428 TELO2Q9Y4R8 837 aa13.8□□□□□ -0.2
CBX3P4-202ENST00000540428 BAZ2BQ9UIF8 2168 aaKnown RBP13.8□□□□□ -0.2
CBX3P4-202ENST00000540428 MBLAC1A4D2B0 266 aaPredicted RBP13.79□□□□□ -0.2
CBX3P4-202ENST00000540428 CCDC69A6NI79 296 aa13.79□□□□□ -0.2
CBX3P4-202ENST00000540428 ATP9AO75110 1047 aa13.79□□□□□ -0.2
CBX3P4-202ENST00000540428 PLEKHA8P1O95397 391 aa13.79□□□□□ -0.2
CBX3P4-202ENST00000540428 CHRNA1P02708 482 aa13.79□□□□□ -0.2
CBX3P4-202ENST00000540428 RB1P06400 928 aa13.79□□□□□ -0.2
CBX3P4-202ENST00000540428 ITGB5P18084 799 aa13.79□□□□□ -0.2
CBX3P4-202ENST00000540428 SP4Q02446 784 aa13.79□□□□□ -0.2
CBX3P4-202ENST00000540428 MGAT3Q09327 533 aa13.79□□□□□ -0.2
CBX3P4-202ENST00000540428 PPFIA1Q13136 1202 aa13.79□□□□□ -0.2
CBX3P4-202ENST00000540428 COL19A1Q14993 1142 aa13.79□□□□□ -0.2
CBX3P4-202ENST00000540428 NFXL1Q6ZNB6 911 aa13.79□□□□□ -0.2
CBX3P4-202ENST00000540428 TEX2Q8IWB9 1127 aa13.79□□□□□ -0.2
CBX3P4-202ENST00000540428 FAM178BQ8IXR5 827 aa13.79□□□□□ -0.2
CBX3P4-202ENST00000540428 BANK1Q8NDB2 785 aa13.79□□□□□ -0.2
CBX3P4-202ENST00000540428 IL17RAQ96F46 866 aa13.79□□□□□ -0.2
CBX3P4-202ENST00000540428 SMARCAD1Q9H4L7 1026 aa13.79□□□□□ -0.2
CBX3P4-202ENST00000540428 HCN4Q9Y3Q4 1203 aa13.79□□□□□ -0.2
CBX3P4-202ENST00000540428 RWDD3Q9Y3V2 267 aa13.79□□□□□ -0.2
CBX3P4-202ENST00000540428 UBIAD1Q9Y5Z9 338 aa13.79□□□□□ -0.2
CBX3P4-202ENST00000540428 GSTTP1A0A1W2PQM5 241 aa13.78□□□□□ -0.2
CBX3P4-202ENST00000540428 GRXCR2A6NFK2 248 aa13.78□□□□□ -0.2
CBX3P4-202ENST00000540428 SPDYE3A6NKU9 549 aa13.78□□□□□ -0.2
CBX3P4-202ENST00000540428 C5orf67F2Z3F1 127 aa13.78□□□□□ -0.2
CBX3P4-202ENST00000540428 RBAK-RBAKDNI3L0D1 243 aa13.78□□□□□ -0.2
CBX3P4-202ENST00000540428 NCK2O43639 380 aa13.78□□□□□ -0.2
CBX3P4-202ENST00000540428 MTMR1Q13613 665 aa13.78□□□□□ -0.2
CBX3P4-202ENST00000540428 GRIK4Q16099 956 aa13.78□□□□□ -0.2
CBX3P4-202ENST00000540428 PTCRAQ6ISU1 281 aaPredicted RBP13.78□□□□□ -0.2
CBX3P4-202ENST00000540428 GJD3Q8N144 294 aa13.78□□□□□ -0.2
CBX3P4-202ENST00000540428 FIBCD1Q8N539 461 aa13.78□□□□□ -0.2
CBX3P4-202ENST00000540428 KHSRPQ92945 711 aaKnown RBP eCLIP13.78□□□□□ -0.2
CBX3P4-202ENST00000540428 PABPC5Q96DU9 382 aaKnown RBP13.78□□□□□ -0.2
CBX3P4-202ENST00000540428 LMAN2LQ9H0V9 348 aa13.78□□□□□ -0.2
CBX3P4-202ENST00000540428 NSUN3Q9H649 340 aaKnown RBP13.78□□□□□ -0.2
CBX3P4-202ENST00000540428 CD320Q9NPF0 282 aa13.78□□□□□ -0.2
CBX3P4-202ENST00000540428 TUBE1Q9UJT0 475 aa13.78□□□□□ -0.2
CBX3P4-202ENST00000540428 SUPT16HQ9Y5B9 1047 aaKnown RBP13.78□□□□□ -0.2
CBX3P4-202ENST00000540428 GHRP10912 638 aa13.77□□□□□ -0.21
CBX3P4-202ENST00000540428 IL9P15248 144 aa13.77□□□□□ -0.21
CBX3P4-202ENST00000540428 LPIN1Q14693 890 aa13.77□□□□□ -0.21
CBX3P4-202ENST00000540428 TCEAL5Q5H9L2 206 aa13.77□□□□□ -0.21
CBX3P4-202ENST00000540428 RUFY4Q6ZNE9 571 aa13.77□□□□□ -0.21
CBX3P4-202ENST00000540428 TMTC3Q6ZXV5 915 aa13.77□□□□□ -0.21
CBX3P4-202ENST00000540428 GLG1Q92896 1179 aa13.77□□□□□ -0.21
CBX3P4-202ENST00000540428 TNPO1Q92973 898 aaKnown RBP13.77□□□□□ -0.21
CBX3P4-202ENST00000540428 C11orf84Q9BUA3 381 aaPredicted RBP13.77□□□□□ -0.21
CBX3P4-202ENST00000540428 LSG1Q9H089 658 aaKnown RBP13.77□□□□□ -0.21
CBX3P4-202ENST00000540428 RC3H2Q9HBD1 1191 aaKnown RBP13.77□□□□□ -0.21
CBX3P4-202ENST00000540428 C11orf16Q9NQ32 467 aa13.77□□□□□ -0.21
CBX3P4-202ENST00000540428 JADE2Q9NQC1 790 aa13.77□□□□□ -0.21
CBX3P4-202ENST00000540428 BRWD1Q9NSI6 2320 aa13.77□□□□□ -0.21
CBX3P4-202ENST00000540428 FAM50BQ9Y247 325 aa13.77□□□□□ -0.21
CBX3P4-202ENST00000540428 SLC12A7Q9Y666 1083 aa13.77□□□□□ -0.21
CBX3P4-202ENST00000540428 SQORQ9Y6N5 450 aa13.77□□□□□ -0.21
CBX3P4-202ENST00000540428 ADGRA3Q8IWK6 1321 aa13.76□□□□□ -0.21
CBX3P4-202ENST00000540428 RRN3P2A6NIE6 340 aa13.76□□□□□ -0.21
CBX3P4-202ENST00000540428 ENPP3O14638 875 aa13.76□□□□□ -0.21
CBX3P4-202ENST00000540428 SLC27A2O14975 620 aa13.76□□□□□ -0.21
CBX3P4-202ENST00000540428 LINC00271P0C7V0 271 aa13.76□□□□□ -0.21
CBX3P4-202ENST00000540428 BMPR1AP36894 532 aa13.76□□□□□ -0.21
CBX3P4-202ENST00000540428 FBXO47Q5MNV8 452 aa13.76□□□□□ -0.21
CBX3P4-202ENST00000540428 MARCH8Q5T0T0 291 aa13.76□□□□□ -0.21
CBX3P4-202ENST00000540428 TSHZ1Q6ZSZ6 1077 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms