RNA–Protein interactions for RNA: ENST00000540128.1

TRIM65-202, Transcript of tripartite motif containing 65, humanhuman

TSL 3

Gene TRIM65, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-202ENST00000540128 HSCBQ8IWL3 235 aa25■■□□□ 1.59
TRIM65-202ENST00000540128 TUT1Q9H6E5 874 aaKnown RBP25■■□□□ 1.59
TRIM65-202ENST00000540128 KIF28PB7ZC32 967 aa24.99■■□□□ 1.59
TRIM65-202ENST00000540128 TBX3O15119 743 aa24.99■■□□□ 1.59
TRIM65-202ENST00000540128 CCNT1O60563 726 aaKnown RBP24.99■■□□□ 1.59
TRIM65-202ENST00000540128 KRT76Q01546 638 aa24.99■■□□□ 1.59
TRIM65-202ENST00000540128 KIAA0753Q2KHM9 967 aa24.99■■□□□ 1.59
TRIM65-202ENST00000540128 FAM20AQ96MK3 541 aa24.99■■□□□ 1.59
TRIM65-202ENST00000540128 KCNMB3Q9NPA1 279 aa24.99■■□□□ 1.59
TRIM65-202ENST00000540128 IGKV6D-21A0A0A0MT36 114 aa24.98■■□□□ 1.59
TRIM65-202ENST00000540128 H0YGN5 161 aa24.98■■□□□ 1.59
TRIM65-202ENST00000540128 PSMD10O75832 226 aa24.98■■□□□ 1.59
TRIM65-202ENST00000540128 CLTBP09497 229 aa24.98■■□□□ 1.59
TRIM65-202ENST00000540128 B3GNT9Q6UX72 402 aa24.98■■□□□ 1.59
TRIM65-202ENST00000540128 ABHD15Q6UXT9 468 aa24.98■■□□□ 1.59
TRIM65-202ENST00000540128 UIMC1Q96RL1 719 aa24.98■■□□□ 1.59
TRIM65-202ENST00000540128 PCYT2Q99447 389 aa24.98■■□□□ 1.59
TRIM65-202ENST00000540128 SMARCAD1Q9H4L7 1026 aa24.98■■□□□ 1.59
TRIM65-202ENST00000540128 PDLIM7Q9NR12 457 aa24.98■■□□□ 1.59
TRIM65-202ENST00000540128 EMSYQ7Z589 1322 aa24.97■■□□□ 1.59
TRIM65-202ENST00000540128 KIAA0355O15063 1070 aa24.97■■□□□ 1.59
TRIM65-202ENST00000540128 TLR3O15455 904 aaKnown RBP24.97■■□□□ 1.59
TRIM65-202ENST00000540128 TRAPPC10P48553 1259 aa24.97■■□□□ 1.59
TRIM65-202ENST00000540128 UTP14CQ5TAP6 766 aaKnown RBP24.97■■□□□ 1.59
TRIM65-202ENST00000540128 SMAP1Q8IYB5 467 aaPredicted RBP24.97■■□□□ 1.59
TRIM65-202ENST00000540128 HAS1Q92839 578 aa24.97■■□□□ 1.59
TRIM65-202ENST00000540128 ZNF215Q9UL58 517 aaPredicted RBP24.97■■□□□ 1.59
TRIM65-202ENST00000540128 H3BQV1 296 aa24.96■■□□□ 1.59
TRIM65-202ENST00000540128 DDX39AO00148 427 aaKnown RBP24.96■■□□□ 1.59
TRIM65-202ENST00000540128 WNT7AO00755 349 aa24.96■■□□□ 1.59
TRIM65-202ENST00000540128 GAS7O60861 476 aa24.96■■□□□ 1.59
TRIM65-202ENST00000540128 SUPT20HL2P0C7V6 817 aa24.96■■□□□ 1.59
TRIM65-202ENST00000540128 PDCP20941 246 aa24.96■■□□□ 1.59
TRIM65-202ENST00000540128 LRCH2Q5VUJ6 765 aa24.96■■□□□ 1.59
TRIM65-202ENST00000540128 PLPPR4Q7Z2D5 763 aa24.96■■□□□ 1.59
TRIM65-202ENST00000540128 TRIM50Q86XT4 487 aa24.96■■□□□ 1.59
TRIM65-202ENST00000540128 TEKT3Q9BXF9 490 aa24.96■■□□□ 1.59
TRIM65-202ENST00000540128 TRPV6Q9H1D0 765 aa24.96■■□□□ 1.59
TRIM65-202ENST00000540128 HDAC6Q9UBN7 1215 aa24.96■■□□□ 1.59
TRIM65-202ENST00000540128 TBX21Q9UL17 535 aa24.96■■□□□ 1.59
TRIM65-202ENST00000540128 TRIM43BA6NCK2 446 aa24.95■■□□□ 1.58
TRIM65-202ENST00000540128 B4GALT4O60513 344 aa24.95■■□□□ 1.58
TRIM65-202ENST00000540128 HOXC8P31273 242 aa24.95■■□□□ 1.58
TRIM65-202ENST00000540128 ORC2Q13416 577 aaPredicted RBP24.95■■□□□ 1.58
TRIM65-202ENST00000540128 GNL2Q13823 731 aaKnown RBP24.95■■□□□ 1.58
TRIM65-202ENST00000540128 MIS18BP1Q6P0N0 1132 aa24.95■■□□□ 1.58
TRIM65-202ENST00000540128 SH3RF1Q7Z6J0 888 aa24.95■■□□□ 1.58
TRIM65-202ENST00000540128 C7orf31Q8N865 590 aa24.95■■□□□ 1.58
TRIM65-202ENST00000540128 AFAP1L1Q8TED9 768 aa24.95■■□□□ 1.58
TRIM65-202ENST00000540128 TRIM43Q96BQ3 446 aaPredicted RBP24.95■■□□□ 1.58
TRIM65-202ENST00000540128 ERAP1Q9NZ08 941 aa24.95■■□□□ 1.58
TRIM65-202ENST00000540128 GTF2IRD1Q9UHL9 959 aa24.95■■□□□ 1.58
TRIM65-202ENST00000540128 ZMYND8Q9ULU4 1186 aaPredicted RBP24.95■■□□□ 1.58
TRIM65-202ENST00000540128 PCDHA10Q9Y5I2 948 aa24.95■■□□□ 1.58
TRIM65-202ENST00000540128 SFNP31947 248 aa24.94■■□□□ 1.58
TRIM65-202ENST00000540128 STAT5BP51692 787 aa24.94■■□□□ 1.58
TRIM65-202ENST00000540128 FAM47CQ5HY64 1035 aa24.94■■□□□ 1.58
TRIM65-202ENST00000540128 RDM1Q8NG50 284 aa24.94■■□□□ 1.58
TRIM65-202ENST00000540128 GLG1Q92896 1179 aa24.94■■□□□ 1.58
TRIM65-202ENST00000540128 GJA10Q969M2 543 aa24.94■■□□□ 1.58
TRIM65-202ENST00000540128 RNPEPQ9H4A4 650 aa24.94■■□□□ 1.58
TRIM65-202ENST00000540128 AZI2Q9H6S1 392 aa24.94■■□□□ 1.58
TRIM65-202ENST00000540128 TRMT13Q9NUP7 481 aaKnown RBP24.94■■□□□ 1.58
TRIM65-202ENST00000540128 TMEM39AQ9NV64 488 aa24.94■■□□□ 1.58
TRIM65-202ENST00000540128 TCEAL9Q9UHQ7 104 aa24.94■■□□□ 1.58
TRIM65-202ENST00000540128 WDR64B1ANS9 1081 aa24.93■■□□□ 1.58
TRIM65-202ENST00000540128 SLC26A2P50443 739 aa24.93■■□□□ 1.58
TRIM65-202ENST00000540128 PRPF38BQ5VTL8 546 aaKnown RBP24.93■■□□□ 1.58
TRIM65-202ENST00000540128 GDF6Q6KF10 455 aaPredicted RBP24.93■■□□□ 1.58
TRIM65-202ENST00000540128 POTEDQ86YR6 584 aa24.93■■□□□ 1.58
TRIM65-202ENST00000540128 SLFN12Q8IYM2 578 aa24.93■■□□□ 1.58
TRIM65-202ENST00000540128 PPP1R13LQ8WUF5 828 aa24.93■■□□□ 1.58
TRIM65-202ENST00000540128 MTMR9Q96QG7 549 aa24.93■■□□□ 1.58
TRIM65-202ENST00000540128 CTAGE1Q96RT6 745 aa24.93■■□□□ 1.58
TRIM65-202ENST00000540128 UNC45AQ9H3U1 944 aa24.93■■□□□ 1.58
TRIM65-202ENST00000540128 PRKAG2Q9UGJ0 569 aa24.93■■□□□ 1.58
TRIM65-202ENST00000540128 DNAH12Q6ZR08 3092 aa24.93■■□□□ 1.58
TRIM65-202ENST00000540128 PSAPP07602 524 aa24.92■■□□□ 1.58
TRIM65-202ENST00000540128 SMIM10L2AP0DMW4 78 aa24.92■■□□□ 1.58
TRIM65-202ENST00000540128 SMIM10L2BP0DMW5 78 aa24.92■■□□□ 1.58
TRIM65-202ENST00000540128 TOB1P50616 345 aaPredicted RBP24.92■■□□□ 1.58
TRIM65-202ENST00000540128 JAK3P52333 1124 aa24.92■■□□□ 1.58
TRIM65-202ENST00000540128 CHMP4BP1P59074 171 aa24.92■■□□□ 1.58
TRIM65-202ENST00000540128 PPP2R5CQ13362 524 aa24.92■■□□□ 1.58
TRIM65-202ENST00000540128 MCTP1Q6DN14 999 aa24.92■■□□□ 1.58
TRIM65-202ENST00000540128 DISC1Q9NRI5 854 aa24.92■■□□□ 1.58
TRIM65-202ENST00000540128 VAV3Q9UKW4 847 aa24.92■■□□□ 1.58
TRIM65-202ENST00000540128 NOL7Q9UMY1 257 aaKnown RBP24.92■■□□□ 1.58
TRIM65-202ENST00000540128 MAFBQ9Y5Q3 323 aaPredicted RBP24.92■■□□□ 1.58
TRIM65-202ENST00000540128 BAG4O95429 457 aaKnown RBP24.91■■□□□ 1.58
TRIM65-202ENST00000540128 SYN1P17600 705 aa24.91■■□□□ 1.58
TRIM65-202ENST00000540128 ATP2B1P20020 1258 aa24.91■■□□□ 1.58
TRIM65-202ENST00000540128 SYT1P21579 422 aa24.91■■□□□ 1.58
TRIM65-202ENST00000540128 HIC1Q14526 733 aa24.91■■□□□ 1.58
TRIM65-202ENST00000540128 PTGISQ16647 500 aa24.91■■□□□ 1.58
TRIM65-202ENST00000540128 FAM160B1Q5W0V3 765 aa24.91■■□□□ 1.58
TRIM65-202ENST00000540128 SWSAP1Q6NVH7 229 aa24.91■■□□□ 1.58
TRIM65-202ENST00000540128 CCDC60Q8IWA6 550 aaPredicted RBP24.91■■□□□ 1.58
TRIM65-202ENST00000540128 PRDM5Q9NQX1 630 aaPredicted RBP24.91■■□□□ 1.58
TRIM65-202ENST00000540128 NEMFO60524 1076 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms