RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 CNTNAP5Q8WYK1 1306 aa6.59□□□□□ -1.35
PTPRD-214ENST00000540109 ESYT2A0FGR8 921 aa6.59□□□□□ -1.35
PTPRD-214ENST00000540109 ABLIM1O14639 778 aa6.59□□□□□ -1.35
PTPRD-214ENST00000540109 PLSCR1O15162 318 aa6.59□□□□□ -1.35
PTPRD-214ENST00000540109 NPM3O75607 178 aaKnown RBP6.59□□□□□ -1.35
PTPRD-214ENST00000540109 HSPA6P17066 643 aa6.59□□□□□ -1.35
PTPRD-214ENST00000540109 EPHB4P54760 987 aa6.59□□□□□ -1.35
PTPRD-214ENST00000540109 SKOR1P84550 965 aa6.59□□□□□ -1.35
PTPRD-214ENST00000540109 HDLBPQ00341 1268 aaKnown RBP6.59□□□□□ -1.35
PTPRD-214ENST00000540109 SOGA3Q5TF21 947 aa6.59□□□□□ -1.35
PTPRD-214ENST00000540109 LMBRD2Q68DH5 695 aaPredicted RBP6.59□□□□□ -1.35
PTPRD-214ENST00000540109 C3orf67Q6ZVT6 689 aa6.59□□□□□ -1.35
PTPRD-214ENST00000540109 IQUBQ8NA54 791 aa6.59□□□□□ -1.35
PTPRD-214ENST00000540109 AK8Q96MA6 479 aa6.59□□□□□ -1.35
PTPRD-214ENST00000540109 GSDMAQ96QA5 445 aa6.59□□□□□ -1.35
PTPRD-214ENST00000540109 NRXN2Q9P2S2 1712 aa6.59□□□□□ -1.35
PTPRD-214ENST00000540109 MARCKSP29966 332 aaPredicted RBP6.59□□□□□ -1.35
PTPRD-214ENST00000540109 MTIF2P46199 727 aaKnown RBP6.59□□□□□ -1.35
PTPRD-214ENST00000540109 RAB15P59190 212 aa6.59□□□□□ -1.35
PTPRD-214ENST00000540109 BIRC3Q13489 604 aa6.59□□□□□ -1.35
PTPRD-214ENST00000540109 CCDC80Q76M96 950 aa6.59□□□□□ -1.35
PTPRD-214ENST00000540109 FERMT1Q9BQL6 677 aa6.59□□□□□ -1.35
PTPRD-214ENST00000540109 CCDC28BQ9BUN5 200 aa6.59□□□□□ -1.35
PTPRD-214ENST00000540109 RAB17Q9H0T7 212 aa6.59□□□□□ -1.35
PTPRD-214ENST00000540109 ZHX3Q9H4I2 956 aa6.59□□□□□ -1.35
PTPRD-214ENST00000540109 FBXO2Q9UK22 296 aaPredicted RBP6.59□□□□□ -1.35
PTPRD-214ENST00000540109 SUN1O94901 812 aa6.59□□□□□ -1.35
PTPRD-214ENST00000540109 GYS1P13807 737 aa6.59□□□□□ -1.35
PTPRD-214ENST00000540109 TTC38Q5R3I4 469 aa6.59□□□□□ -1.35
PTPRD-214ENST00000540109 C16orf86Q6ZW13 317 aa6.59□□□□□ -1.35
PTPRD-214ENST00000540109 SUPT20HQ8NEM7 779 aa6.59□□□□□ -1.35
PTPRD-214ENST00000540109 NEDD1Q8NHV4 660 aa6.59□□□□□ -1.35
PTPRD-214ENST00000540109 HNRNPLLQ8WVV9 542 aaKnown RBP6.59□□□□□ -1.35
PTPRD-214ENST00000540109 CD209Q9NNX6 404 aa6.59□□□□□ -1.35
PTPRD-214ENST00000540109 UTP6Q9NYH9 597 aaKnown RBP6.59□□□□□ -1.35
PTPRD-214ENST00000540109 KLHL14Q9P2G3 628 aa6.59□□□□□ -1.35
PTPRD-214ENST00000540109 SYNPO2Q9UMS6 1093 aa6.59□□□□□ -1.35
PTPRD-214ENST00000540109 STK24Q9Y6E0 443 aa6.59□□□□□ -1.35
PTPRD-214ENST00000540109 GFAPP14136 432 aa6.58□□□□□ -1.36
PTPRD-214ENST00000540109 FUT2Q10981 343 aa6.58□□□□□ -1.36
PTPRD-214ENST00000540109 POSTNQ15063 836 aa6.58□□□□□ -1.36
PTPRD-214ENST00000540109 ADGRA1Q86SQ6 560 aa6.58□□□□□ -1.36
PTPRD-214ENST00000540109 FAM96AQ9H5X1 160 aa6.58□□□□□ -1.36
PTPRD-214ENST00000540109 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.58□□□□□ -1.36
PTPRD-214ENST00000540109 STOML1Q9UBI4 398 aa6.58□□□□□ -1.36
PTPRD-214ENST00000540109 PSMA7O14818 248 aa6.58□□□□□ -1.36
PTPRD-214ENST00000540109 PPEF1O14829 653 aaPredicted RBP6.58□□□□□ -1.36
PTPRD-214ENST00000540109 DYNLL1P63167 89 aaKnown RBP6.58□□□□□ -1.36
PTPRD-214ENST00000540109 PTPN21Q16825 1174 aa6.58□□□□□ -1.36
PTPRD-214ENST00000540109 KRT71Q3SY84 523 aa6.58□□□□□ -1.36
PTPRD-214ENST00000540109 ASPRV1Q53RT3 343 aa6.58□□□□□ -1.36
PTPRD-214ENST00000540109 CCDC62Q6P9F0 684 aa6.58□□□□□ -1.36
PTPRD-214ENST00000540109 RINLQ6ZS11 566 aa6.58□□□□□ -1.36
PTPRD-214ENST00000540109 DHX40Q8IX18 779 aaKnown RBP6.58□□□□□ -1.36
PTPRD-214ENST00000540109 SYCE1Q8N0S2 351 aa6.58□□□□□ -1.36
PTPRD-214ENST00000540109 CCDC197Q8NCU1 140 aa6.58□□□□□ -1.36
PTPRD-214ENST00000540109 BBOF1Q8ND07 529 aa6.58□□□□□ -1.36
PTPRD-214ENST00000540109 DHX58Q96C10 678 aa6.58□□□□□ -1.36
PTPRD-214ENST00000540109 KLHL29Q96CT2 875 aa6.58□□□□□ -1.36
PTPRD-214ENST00000540109 C6orf50Q9HD87 102 aa6.58□□□□□ -1.36
PTPRD-214ENST00000540109 HAUS2Q9NVX0 235 aa6.58□□□□□ -1.36
PTPRD-214ENST00000540109 SEC63Q9UGP8 760 aaKnown RBP6.58□□□□□ -1.36
PTPRD-214ENST00000540109 PCDHA4Q9UN74 947 aa6.58□□□□□ -1.36
PTPRD-214ENST00000540109 ATP6V0A2Q9Y487 856 aa6.58□□□□□ -1.36
PTPRD-214ENST00000540109 HLA-DOAP06340 250 aa6.58□□□□□ -1.36
PTPRD-214ENST00000540109 ATP2C1P98194 919 aaPredicted RBP6.58□□□□□ -1.36
PTPRD-214ENST00000540109 ST13P4Q8IZP2 240 aaPredicted RBP6.58□□□□□ -1.36
PTPRD-214ENST00000540109 RETREG2Q8NC44 543 aa6.58□□□□□ -1.36
PTPRD-214ENST00000540109 ENOX1Q8TC92 643 aaKnown RBP6.58□□□□□ -1.36
PTPRD-214ENST00000540109 CCDC17Q96LX7 622 aa6.58□□□□□ -1.36
PTPRD-214ENST00000540109 ARIH1Q9Y4X5 557 aaPredicted RBP6.58□□□□□ -1.36
PTPRD-214ENST00000540109 CCDC194A0A1B0GVG4 234 aa6.58□□□□□ -1.36
PTPRD-214ENST00000540109 BTBD18B2RXH4 712 aa6.58□□□□□ -1.36
PTPRD-214ENST00000540109 KRT13P13646 458 aa6.58□□□□□ -1.36
PTPRD-214ENST00000540109 FERP16591 822 aa6.58□□□□□ -1.36
PTPRD-214ENST00000540109 AFMP43652 599 aa6.58□□□□□ -1.36
PTPRD-214ENST00000540109 MMP14P50281 582 aa6.58□□□□□ -1.36
PTPRD-214ENST00000540109 MKRN3Q13064 507 aaKnown RBP6.58□□□□□ -1.36
PTPRD-214ENST00000540109 ADRM1Q16186 407 aa6.58□□□□□ -1.36
PTPRD-214ENST00000540109 CFAP221Q4G0U5 840 aa6.58□□□□□ -1.36
PTPRD-214ENST00000540109 OTUD7BQ6GQQ9 843 aa6.58□□□□□ -1.36
PTPRD-214ENST00000540109 NANOGNBQ7Z5D8 188 aa6.58□□□□□ -1.36
PTPRD-214ENST00000540109 MCF2L2Q86YR7 1114 aa6.58□□□□□ -1.36
PTPRD-214ENST00000540109 IGSF22Q8N9C0 903 aa6.58□□□□□ -1.36
PTPRD-214ENST00000540109 FLCNQ8NFG4 579 aa6.58□□□□□ -1.36
PTPRD-214ENST00000540109 ATL2Q8NHH9 583 aa6.58□□□□□ -1.36
PTPRD-214ENST00000540109 TRIM31Q9BZY9 425 aa6.58□□□□□ -1.36
PTPRD-214ENST00000540109 GGA2Q9UJY4 613 aa6.58□□□□□ -1.36
PTPRD-214ENST00000540109 LZTS1Q9Y250 596 aa6.58□□□□□ -1.36
PTPRD-214ENST00000540109 COL2A1P02458 1487 aaPredicted RBP6.58□□□□□ -1.36
PTPRD-214ENST00000540109 H0Y3Z8 333 aa6.58□□□□□ -1.36
PTPRD-214ENST00000540109 GNAT1P11488 350 aa6.58□□□□□ -1.36
PTPRD-214ENST00000540109 PLCD1P51178 756 aa6.58□□□□□ -1.36
PTPRD-214ENST00000540109 SLC44A4Q53GD3 710 aa6.58□□□□□ -1.36
PTPRD-214ENST00000540109 SHC4Q6S5L8 630 aa6.58□□□□□ -1.36
PTPRD-214ENST00000540109 HHIPL2Q6UWX4 724 aa6.58□□□□□ -1.36
PTPRD-214ENST00000540109 CCDC84Q86UT8 332 aaPredicted RBP6.58□□□□□ -1.36
PTPRD-214ENST00000540109 ZC3H18Q86VM9 953 aaKnown RBP6.58□□□□□ -1.36
PTPRD-214ENST00000540109 PNMA1Q8ND90 353 aa6.58□□□□□ -1.36
PTPRD-214ENST00000540109 MIEF2Q96C03 454 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms