RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 RPGRIP1Q96KN7 1286 aa10.96□□□□□ -0.65
TRAF1-202ENST00000540010 RIC8AQ9NPQ8 531 aa10.96□□□□□ -0.65
TRAF1-202ENST00000540010 DDX25Q9UHL0 483 aaKnown RBP10.96□□□□□ -0.65
TRAF1-202ENST00000540010 SLX4Q8IY92 1834 aa10.96□□□□□ -0.65
TRAF1-202ENST00000540010 RNF40O75150 1001 aa10.96□□□□□ -0.65
TRAF1-202ENST00000540010 EPB41P11171 864 aaKnown RBP10.96□□□□□ -0.65
TRAF1-202ENST00000540010 PLCG1P19174 1290 aa10.96□□□□□ -0.65
TRAF1-202ENST00000540010 DPYDQ12882 1025 aa10.96□□□□□ -0.65
TRAF1-202ENST00000540010 SYDE2Q5VT97 1194 aa10.96□□□□□ -0.65
TRAF1-202ENST00000540010 NAA35Q5VZE5 725 aa10.96□□□□□ -0.65
TRAF1-202ENST00000540010 FAM71BQ8TC56 605 aa10.96□□□□□ -0.65
TRAF1-202ENST00000540010 EHMT1Q9H9B1 1298 aa10.96□□□□□ -0.65
TRAF1-202ENST00000540010 SCAF8Q9UPN6 1271 aaKnown RBP10.96□□□□□ -0.65
TRAF1-202ENST00000540010 SNHG28P0DPA3 235 aa10.96□□□□□ -0.66
TRAF1-202ENST00000540010 BMP6P22004 513 aa10.96□□□□□ -0.66
TRAF1-202ENST00000540010 RASSF7Q02833 373 aa10.96□□□□□ -0.66
TRAF1-202ENST00000540010 ARHGAP44Q17R89 818 aa10.96□□□□□ -0.66
TRAF1-202ENST00000540010 FAM151AQ8WW52 585 aa10.96□□□□□ -0.66
TRAF1-202ENST00000540010 BAIAP2L1Q9UHR4 511 aa10.96□□□□□ -0.66
TRAF1-202ENST00000540010 UTP11Q9Y3A2 253 aaKnown RBP10.96□□□□□ -0.66
TRAF1-202ENST00000540010 RUFY4Q6ZNE9 571 aa10.95□□□□□ -0.66
TRAF1-202ENST00000540010 KIFC2Q96AC6 838 aa10.95□□□□□ -0.66
TRAF1-202ENST00000540010 TMEM39BQ9GZU3 492 aa10.95□□□□□ -0.66
TRAF1-202ENST00000540010 MED4Q9NPJ6 270 aa10.95□□□□□ -0.66
TRAF1-202ENST00000540010 VIL1P09327 827 aaKnown RBP10.95□□□□□ -0.66
TRAF1-202ENST00000540010 CTNNA1P35221 906 aaKnown RBP10.95□□□□□ -0.66
TRAF1-202ENST00000540010 SARSP49591 514 aaKnown RBP10.95□□□□□ -0.66
TRAF1-202ENST00000540010 POLR2FP61218 127 aaKnown RBP10.95□□□□□ -0.66
TRAF1-202ENST00000540010 CASP8Q14790 479 aa10.95□□□□□ -0.66
TRAF1-202ENST00000540010 PPP4R3AQ6IN85 833 aa10.95□□□□□ -0.66
TRAF1-202ENST00000540010 ARMCX5Q6P1M9 558 aa10.95□□□□□ -0.66
TRAF1-202ENST00000540010 DPH5Q9H2P9 285 aa10.95□□□□□ -0.66
TRAF1-202ENST00000540010 CTTNBP2NLQ9P2B4 639 aa10.95□□□□□ -0.66
TRAF1-202ENST00000540010 MORC2Q9Y6X9 1032 aaPredicted RBP10.95□□□□□ -0.66
TRAF1-202ENST00000540010 ECM29Q5VYK3 1845 aa10.95□□□□□ -0.66
TRAF1-202ENST00000540010 DESP17661 470 aa10.95□□□□□ -0.66
TRAF1-202ENST00000540010 CXCL9Q07325 125 aa10.95□□□□□ -0.66
TRAF1-202ENST00000540010 PPP1R14CQ8TAE6 165 aa10.95□□□□□ -0.66
TRAF1-202ENST00000540010 DPF2Q92785 391 aa10.95□□□□□ -0.66
TRAF1-202ENST00000540010 SH2D4AQ9H788 454 aa10.95□□□□□ -0.66
TRAF1-202ENST00000540010 MTUS1Q9ULD2 1270 aa10.95□□□□□ -0.66
TRAF1-202ENST00000540010 HYOU1Q9Y4L1 999 aa10.95□□□□□ -0.66
TRAF1-202ENST00000540010 LRRC37AA6NMS7 1700 aa10.95□□□□□ -0.66
TRAF1-202ENST00000540010 R3HDM1Q15032 1099 aaKnown RBP10.95□□□□□ -0.66
TRAF1-202ENST00000540010 C4orf32Q8N8J7 132 aa10.95□□□□□ -0.66
TRAF1-202ENST00000540010 FAM212AQ96EL1 285 aa10.95□□□□□ -0.66
TRAF1-202ENST00000540010 LSM14BQ9BX40 385 aaKnown RBP10.95□□□□□ -0.66
TRAF1-202ENST00000540010 IQCGQ9H095 443 aaKnown RBP10.95□□□□□ -0.66
TRAF1-202ENST00000540010 FRMD4BQ9Y2L6 1034 aa10.95□□□□□ -0.66
TRAF1-202ENST00000540010 COL11A2P13942 1736 aaPredicted RBP10.94□□□□□ -0.66
TRAF1-202ENST00000540010 M0R2N6 131 aa10.94□□□□□ -0.66
TRAF1-202ENST00000540010 NPM3O75607 178 aaKnown RBP10.94□□□□□ -0.66
TRAF1-202ENST00000540010 MXRA7P84157 204 aa10.94□□□□□ -0.66
TRAF1-202ENST00000540010 SLC7A5Q01650 507 aa10.94□□□□□ -0.66
TRAF1-202ENST00000540010 LLGL1Q15334 1064 aa10.94□□□□□ -0.66
TRAF1-202ENST00000540010 VWA3BQ502W6 1294 aa10.94□□□□□ -0.66
TRAF1-202ENST00000540010 NT5DC1Q5TFE4 455 aa10.94□□□□□ -0.66
TRAF1-202ENST00000540010 TATDN1Q6P1N9 297 aa10.94□□□□□ -0.66
TRAF1-202ENST00000540010 DPH6Q7L8W6 267 aa10.94□□□□□ -0.66
TRAF1-202ENST00000540010 MGARPQ8TDB4 240 aa10.94□□□□□ -0.66
TRAF1-202ENST00000540010 CNOT6LQ96LI5 555 aaKnown RBP10.94□□□□□ -0.66
TRAF1-202ENST00000540010 NAP1L4Q99733 375 aaKnown RBP10.94□□□□□ -0.66
TRAF1-202ENST00000540010 CCSER1Q9C0I3 900 aa10.94□□□□□ -0.66
TRAF1-202ENST00000540010 PCDHA12Q9UN75 941 aa10.94□□□□□ -0.66
TRAF1-202ENST00000540010 TEX33O43247 280 aa10.94□□□□□ -0.66
TRAF1-202ENST00000540010 SRGAP2O75044 1071 aa10.94□□□□□ -0.66
TRAF1-202ENST00000540010 TCP1P17987 556 aaKnown RBP10.94□□□□□ -0.66
TRAF1-202ENST00000540010 STAT2P52630 851 aa10.94□□□□□ -0.66
TRAF1-202ENST00000540010 LRRC41Q15345 812 aa10.94□□□□□ -0.66
TRAF1-202ENST00000540010 PDXDC2PQ6P474 469 aa10.94□□□□□ -0.66
TRAF1-202ENST00000540010 AGBL3Q8NEM8 1001 aa10.94□□□□□ -0.66
TRAF1-202ENST00000540010 FBXO41Q8TF61 875 aa10.94□□□□□ -0.66
TRAF1-202ENST00000540010 STMN4Q9H169 189 aaPredicted RBP10.94□□□□□ -0.66
TRAF1-202ENST00000540010 SYNCQ9H7C4 482 aa10.94□□□□□ -0.66
TRAF1-202ENST00000540010 FLOT1O75955 427 aa10.94□□□□□ -0.66
TRAF1-202ENST00000540010 GCNT3O95395 438 aa10.94□□□□□ -0.66
TRAF1-202ENST00000540010 NOVP48745 357 aa10.94□□□□□ -0.66
TRAF1-202ENST00000540010 TGFB2P61812 414 aa10.94□□□□□ -0.66
TRAF1-202ENST00000540010 IRX5P78411 483 aaPredicted RBP10.94□□□□□ -0.66
TRAF1-202ENST00000540010 TRAF1Q13077 416 aa10.94□□□□□ -0.66
TRAF1-202ENST00000540010 MTF1Q14872 753 aa10.94□□□□□ -0.66
TRAF1-202ENST00000540010 E2F4Q16254 413 aa10.94□□□□□ -0.66
TRAF1-202ENST00000540010 SEL1L2Q5TEA6 688 aa10.94□□□□□ -0.66
TRAF1-202ENST00000540010 E4F1Q66K89 784 aaPredicted RBP10.94□□□□□ -0.66
TRAF1-202ENST00000540010 MKL1Q969V6 931 aa10.94□□□□□ -0.66
TRAF1-202ENST00000540010 GDAQ9Y2T3 454 aa10.94□□□□□ -0.66
TRAF1-202ENST00000540010 POTEMA6NI47 508 aa10.93□□□□□ -0.66
TRAF1-202ENST00000540010 ATP8B1O43520 1251 aa10.93□□□□□ -0.66
TRAF1-202ENST00000540010 CFBP00751 764 aa10.93□□□□□ -0.66
TRAF1-202ENST00000540010 ECE1P42892 770 aa10.93□□□□□ -0.66
TRAF1-202ENST00000540010 ZNF658Q5TYW1 1059 aaPredicted RBP10.93□□□□□ -0.66
TRAF1-202ENST00000540010 CC2D1AQ6P1N0 951 aaPredicted RBP10.93□□□□□ -0.66
TRAF1-202ENST00000540010 ANO3Q9BYT9 981 aa10.93□□□□□ -0.66
TRAF1-202ENST00000540010 DDX60LQ5H9U9 1706 aaKnown RBP10.93□□□□□ -0.66
TRAF1-202ENST00000540010 BUB1BO60566 1050 aaPredicted RBP10.93□□□□□ -0.66
TRAF1-202ENST00000540010 NDUFA10O95299 355 aa10.93□□□□□ -0.66
TRAF1-202ENST00000540010 ARHGAP25P42331 645 aa10.93□□□□□ -0.66
TRAF1-202ENST00000540010 C2orf54Q08AI8 447 aa10.93□□□□□ -0.66
TRAF1-202ENST00000540010 FAM83BQ5T0W9 1011 aa10.93□□□□□ -0.66
TRAF1-202ENST00000540010 SH3RF1Q7Z6J0 888 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms