RNA–Protein interactions for RNA: ENST00000539960.1

PRPF19-204, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 2

Gene PRPF19, Length 796 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-204ENST00000539960 ATG7O95352 703 aa15.22■□□□□ 0.03
PRPF19-204ENST00000539960 CCNE2O96020 404 aa15.22■□□□□ 0.03
PRPF19-204ENST00000539960 SUPT20HL2P0C7V6 817 aa15.22■□□□□ 0.03
PRPF19-204ENST00000539960 GJB2P29033 226 aa15.22■□□□□ 0.03
PRPF19-204ENST00000539960 C7orf31Q8N865 590 aa15.22■□□□□ 0.03
PRPF19-204ENST00000539960 SLC5A5Q92911 643 aa15.22■□□□□ 0.03
PRPF19-204ENST00000539960 SNX21Q969T3 373 aa15.22■□□□□ 0.03
PRPF19-204ENST00000539960 RIT2Q99578 217 aa15.22■□□□□ 0.03
PRPF19-204ENST00000539960 NAP1L4Q99733 375 aaKnown RBP15.22■□□□□ 0.03
PRPF19-204ENST00000539960 FOXP1Q9H334 677 aaPredicted RBP15.22■□□□□ 0.03
PRPF19-204ENST00000539960 SMARCAD1Q9H4L7 1026 aa15.22■□□□□ 0.03
PRPF19-204ENST00000539960 TRMT13Q9NUP7 481 aaKnown RBP15.22■□□□□ 0.03
PRPF19-204ENST00000539960 HDAC6Q9UBN7 1215 aa15.22■□□□□ 0.03
PRPF19-204ENST00000539960 TBX21Q9UL17 535 aa15.22■□□□□ 0.03
PRPF19-204ENST00000539960 SMC3Q9UQE7 1217 aa15.22■□□□□ 0.03
PRPF19-204ENST00000539960 CEP290O15078 2479 aa15.22■□□□□ 0.03
PRPF19-204ENST00000539960 ALPK3Q96L96 1907 aa15.21■□□□□ 0.03
PRPF19-204ENST00000539960 DDX39AO00148 427 aaKnown RBP15.21■□□□□ 0.03
PRPF19-204ENST00000539960 LGR5O75473 907 aa15.21■□□□□ 0.03
PRPF19-204ENST00000539960 GCFC2P16383 781 aaKnown RBP15.21■□□□□ 0.03
PRPF19-204ENST00000539960 ABHD15Q6UXT9 468 aa15.21■□□□□ 0.03
PRPF19-204ENST00000539960 PCYT2Q99447 389 aa15.21■□□□□ 0.03
PRPF19-204ENST00000539960 LBHD1Q9BQE6 289 aaPredicted RBP15.21■□□□□ 0.03
PRPF19-204ENST00000539960 DDX25Q9UHL0 483 aaKnown RBP15.21■□□□□ 0.03
PRPF19-204ENST00000539960 ZNF215Q9UL58 517 aaPredicted RBP15.21■□□□□ 0.03
PRPF19-204ENST00000539960 CCNT1O60563 726 aaKnown RBP15.2■□□□□ 0.02
PRPF19-204ENST00000539960 TIMP1P01033 207 aa15.2■□□□□ 0.02
PRPF19-204ENST00000539960 RAG1P15918 1043 aa15.2■□□□□ 0.02
PRPF19-204ENST00000539960 ITGB8P26012 769 aa15.2■□□□□ 0.02
PRPF19-204ENST00000539960 KRT76Q01546 638 aa15.2■□□□□ 0.02
PRPF19-204ENST00000539960 GDF6Q6KF10 455 aaPredicted RBP15.2■□□□□ 0.02
PRPF19-204ENST00000539960 ZNF746Q6NUN9 644 aaPredicted RBP15.2■□□□□ 0.02
PRPF19-204ENST00000539960 TRIM50Q86XT4 487 aa15.2■□□□□ 0.02
PRPF19-204ENST00000539960 ETNPPLQ8TBG4 499 aa15.2■□□□□ 0.02
PRPF19-204ENST00000539960 GLG1Q92896 1179 aa15.2■□□□□ 0.02
PRPF19-204ENST00000539960 FAM20AQ96MK3 541 aa15.2■□□□□ 0.02
PRPF19-204ENST00000539960 GDF15Q99988 308 aa15.2■□□□□ 0.02
PRPF19-204ENST00000539960 RNPEPQ9H4A4 650 aa15.2■□□□□ 0.02
PRPF19-204ENST00000539960 PCDH10Q9P2E7 1040 aa15.2■□□□□ 0.02
PRPF19-204ENST00000539960 GTF2IRD1Q9UHL9 959 aa15.2■□□□□ 0.02
PRPF19-204ENST00000539960 SCN10AQ9Y5Y9 1956 aa15.19■□□□□ 0.02
PRPF19-204ENST00000539960 IGKV6D-21A0A0A0MT36 114 aa15.19■□□□□ 0.02
PRPF19-204ENST00000539960 K7ELQ4 463 aaPredicted RBP15.19■□□□□ 0.02
PRPF19-204ENST00000539960 SLC37A4O43826 429 aa15.19■□□□□ 0.02
PRPF19-204ENST00000539960 GAS7O60861 476 aa15.19■□□□□ 0.02
PRPF19-204ENST00000539960 PSMD10O75832 226 aa15.19■□□□□ 0.02
PRPF19-204ENST00000539960 CYP2C9P11712 490 aa15.19■□□□□ 0.02
PRPF19-204ENST00000539960 U2AF2P26368 475 aaKnown RBP eCLIP15.19■□□□□ 0.02
PRPF19-204ENST00000539960 MAGEA10P43363 369 aaPredicted RBP15.19■□□□□ 0.02
PRPF19-204ENST00000539960 STAT5BP51692 787 aa15.19■□□□□ 0.02
PRPF19-204ENST00000539960 MDM2Q00987 491 aaPredicted RBP15.19■□□□□ 0.02
PRPF19-204ENST00000539960 PTGISQ16647 500 aa15.19■□□□□ 0.02
PRPF19-204ENST00000539960 LRCH2Q5VUJ6 765 aa15.19■□□□□ 0.02
PRPF19-204ENST00000539960 LARP1BQ659C4 914 aaKnown RBP15.19■□□□□ 0.02
PRPF19-204ENST00000539960 MIS18BP1Q6P0N0 1132 aa15.19■□□□□ 0.02
PRPF19-204ENST00000539960 PLPPR4Q7Z2D5 763 aa15.19■□□□□ 0.02
PRPF19-204ENST00000539960 BADQ92934 168 aa15.19■□□□□ 0.02
PRPF19-204ENST00000539960 GJA10Q969M2 543 aa15.19■□□□□ 0.02
PRPF19-204ENST00000539960 AZI2Q9H6S1 392 aa15.19■□□□□ 0.02
PRPF19-204ENST00000539960 ERAP1Q9NZ08 941 aa15.19■□□□□ 0.02
PRPF19-204ENST00000539960 TCEAL9Q9UHQ7 104 aa15.19■□□□□ 0.02
PRPF19-204ENST00000539960 PCDHA10Q9Y5I2 948 aa15.19■□□□□ 0.02
PRPF19-204ENST00000539960 EMSYQ7Z589 1322 aa15.18■□□□□ 0.02
PRPF19-204ENST00000539960 TBX3O15119 743 aa15.18■□□□□ 0.02
PRPF19-204ENST00000539960 SMIM10L2AP0DMW4 78 aa15.18■□□□□ 0.02
PRPF19-204ENST00000539960 SMIM10L2BP0DMW5 78 aa15.18■□□□□ 0.02
PRPF19-204ENST00000539960 BMP8BP34820 402 aa15.18■□□□□ 0.02
PRPF19-204ENST00000539960 GNL2Q13823 731 aaKnown RBP15.18■□□□□ 0.02
PRPF19-204ENST00000539960 HIC1Q14526 733 aa15.18■□□□□ 0.02
PRPF19-204ENST00000539960 SWSAP1Q6NVH7 229 aa15.18■□□□□ 0.02
PRPF19-204ENST00000539960 NOSTRINQ8IVI9 506 aa15.18■□□□□ 0.02
PRPF19-204ENST00000539960 SMAP1Q8IYB5 467 aaPredicted RBP15.18■□□□□ 0.02
PRPF19-204ENST00000539960 INTS4Q96HW7 963 aaKnown RBP15.18■□□□□ 0.02
PRPF19-204ENST00000539960 CTAGE1Q96RT6 745 aa15.18■□□□□ 0.02
PRPF19-204ENST00000539960 TEKT3Q9BXF9 490 aa15.18■□□□□ 0.02
PRPF19-204ENST00000539960 HIPK3Q9H422 1215 aa15.18■□□□□ 0.02
PRPF19-204ENST00000539960 KCNMB3Q9NPA1 279 aa15.18■□□□□ 0.02
PRPF19-204ENST00000539960 NOD1Q9Y239 953 aa15.18■□□□□ 0.02
PRPF19-204ENST00000539960 C17orf102A2RUQ5 167 aa15.17■□□□□ 0.02
PRPF19-204ENST00000539960 KIF28PB7ZC32 967 aa15.17■□□□□ 0.02
PRPF19-204ENST00000539960 H3BQV1 296 aa15.17■□□□□ 0.02
PRPF19-204ENST00000539960 BACH1O14867 736 aa15.17■□□□□ 0.02
PRPF19-204ENST00000539960 BAG4O95429 457 aaKnown RBP15.17■□□□□ 0.02
PRPF19-204ENST00000539960 PSAPP07602 524 aa15.17■□□□□ 0.02
PRPF19-204ENST00000539960 GNAT1P11488 350 aa15.17■□□□□ 0.02
PRPF19-204ENST00000539960 ATP2B1P20020 1258 aa15.17■□□□□ 0.02
PRPF19-204ENST00000539960 MARK3P27448 753 aa15.17■□□□□ 0.02
PRPF19-204ENST00000539960 HOXC8P31273 242 aa15.17■□□□□ 0.02
PRPF19-204ENST00000539960 SFNP31947 248 aa15.17■□□□□ 0.02
PRPF19-204ENST00000539960 ZNF200P98182 395 aaPredicted RBP15.17■□□□□ 0.02
PRPF19-204ENST00000539960 FAM160B1Q5W0V3 765 aa15.17■□□□□ 0.02
PRPF19-204ENST00000539960 MFSD5Q6N075 450 aa15.17■□□□□ 0.02
PRPF19-204ENST00000539960 CHRDL2Q6WN34 429 aa15.17■□□□□ 0.02
PRPF19-204ENST00000539960 AFAP1L1Q8TED9 768 aa15.17■□□□□ 0.02
PRPF19-204ENST00000539960 HAS1Q92839 578 aa15.17■□□□□ 0.02
PRPF19-204ENST00000539960 NOC4LQ9BVI4 516 aaKnown RBP15.17■□□□□ 0.02
PRPF19-204ENST00000539960 PRO3102Q9H379 93 aa15.17■□□□□ 0.02
PRPF19-204ENST00000539960 UNC45AQ9H3U1 944 aa15.17■□□□□ 0.02
PRPF19-204ENST00000539960 DISC1Q9NRI5 854 aa15.17■□□□□ 0.02
PRPF19-204ENST00000539960 SETD4Q9NVD3 440 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms