RNA–Protein interactions for RNA: ENST00000539945.5

MDH1-215, Transcript of malate dehydrogenase 1, humanhuman

TSL 2 BASIC

Gene MDH1, Length 1,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-215ENST00000539945 PLIN2Q99541 437 aa10.84□□□□□ -0.67
MDH1-215ENST00000539945 C7orf25Q9BPX7 421 aa10.84□□□□□ -0.67
MDH1-215ENST00000539945 TRIM5Q9C035 493 aa10.84□□□□□ -0.67
MDH1-215ENST00000539945 BLZF1Q9H2G9 400 aa10.84□□□□□ -0.67
MDH1-215ENST00000539945 KDM3AQ9Y4C1 1321 aa10.83□□□□□ -0.68
MDH1-215ENST00000539945 SPDYE5A6NIY4 337 aa10.83□□□□□ -0.68
MDH1-215ENST00000539945 MEIS1O00470 390 aa10.83□□□□□ -0.68
MDH1-215ENST00000539945 CXCL11O14625 94 aa10.83□□□□□ -0.68
MDH1-215ENST00000539945 CDC25BP30305 580 aa10.83□□□□□ -0.68
MDH1-215ENST00000539945 NFX1Q12986 1120 aaKnown RBP10.83□□□□□ -0.68
MDH1-215ENST00000539945 MUM1L1Q5H9M0 696 aa10.83□□□□□ -0.68
MDH1-215ENST00000539945 CNNM4Q6P4Q7 775 aa10.83□□□□□ -0.68
MDH1-215ENST00000539945 SV2BQ7L1I2 683 aa10.83□□□□□ -0.68
MDH1-215ENST00000539945 CYP2W1Q8TAV3 490 aa10.83□□□□□ -0.68
MDH1-215ENST00000539945 ENOX1Q8TC92 643 aaKnown RBP10.83□□□□□ -0.68
MDH1-215ENST00000539945 SYTL5Q8TDW5 730 aaPredicted RBP10.83□□□□□ -0.68
MDH1-215ENST00000539945 GJA10Q969M2 543 aa10.83□□□□□ -0.68
MDH1-215ENST00000539945 MRFAP1L1Q96HT8 127 aa10.83□□□□□ -0.68
MDH1-215ENST00000539945 WNK4Q96J92 1243 aa10.83□□□□□ -0.68
MDH1-215ENST00000539945 TRERF1Q96PN7 1200 aa10.83□□□□□ -0.68
MDH1-215ENST00000539945 NUDT12Q9BQG2 462 aa10.83□□□□□ -0.68
MDH1-215ENST00000539945 GTPBP4Q9BZE4 634 aaKnown RBP10.83□□□□□ -0.68
MDH1-215ENST00000539945 TRIM9Q9C026 710 aa10.83□□□□□ -0.68
MDH1-215ENST00000539945 LRRC27Q9C0I9 530 aa10.83□□□□□ -0.68
MDH1-215ENST00000539945 NT5C3AQ9H0P0 336 aa10.83□□□□□ -0.68
MDH1-215ENST00000539945 HSD3B7Q9H2F3 369 aa10.83□□□□□ -0.68
MDH1-215ENST00000539945 BLOC1S4Q9NUP1 217 aa10.83□□□□□ -0.68
MDH1-215ENST00000539945 COL20A1Q9P218 1284 aa10.83□□□□□ -0.68
MDH1-215ENST00000539945 ZNF214Q9UL59 606 aaPredicted RBP10.83□□□□□ -0.68
MDH1-215ENST00000539945 RBBP6Q7Z6E9 1792 aaKnown RBP10.82□□□□□ -0.68
MDH1-215ENST00000539945 FRMPD4Q14CM0 1322 aa10.82□□□□□ -0.68
MDH1-215ENST00000539945 PTPRFP10586 1907 aa10.82□□□□□ -0.68
MDH1-215ENST00000539945 A0A0G2JLL6 359 aaPredicted RBP10.82□□□□□ -0.68
MDH1-215ENST00000539945 UNCXA6NJT0 531 aa10.82□□□□□ -0.68
MDH1-215ENST00000539945 KLRC4O43908 158 aa10.82□□□□□ -0.68
MDH1-215ENST00000539945 OATP04181 439 aa10.82□□□□□ -0.68
MDH1-215ENST00000539945 HOXA7P31268 230 aaPredicted RBP10.82□□□□□ -0.68
MDH1-215ENST00000539945 CCT6AP40227 531 aaKnown RBP10.82□□□□□ -0.68
MDH1-215ENST00000539945 RPS6P62753 249 aaKnown RBP10.82□□□□□ -0.68
MDH1-215ENST00000539945 SETQ01105 290 aaPredicted RBP10.82□□□□□ -0.68
MDH1-215ENST00000539945 TKFCQ3LXA3 575 aa10.82□□□□□ -0.68
MDH1-215ENST00000539945 EAPPQ56P03 285 aaPredicted RBP10.82□□□□□ -0.68
MDH1-215ENST00000539945 ZNF658Q5TYW1 1059 aaPredicted RBP10.82□□□□□ -0.68
MDH1-215ENST00000539945 PCNX4Q63HM2 1172 aa10.82□□□□□ -0.68
MDH1-215ENST00000539945 SNRNP48Q6IEG0 339 aaKnown RBP10.82□□□□□ -0.68
MDH1-215ENST00000539945 RNF207Q6ZRF8 634 aa10.82□□□□□ -0.68
MDH1-215ENST00000539945 NIPA1Q7RTP0 329 aa10.82□□□□□ -0.68
MDH1-215ENST00000539945 ARMC9Q7Z3E5 817 aa10.82□□□□□ -0.68
MDH1-215ENST00000539945 PRRT2Q7Z6L0 340 aaPredicted RBP10.82□□□□□ -0.68
MDH1-215ENST00000539945 KCTD17Q8N5Z5 321 aa10.82□□□□□ -0.68
MDH1-215ENST00000539945 PROCA1Q8NCQ7 364 aaPredicted RBP10.82□□□□□ -0.68
MDH1-215ENST00000539945 ERMNQ8TAM6 284 aa10.82□□□□□ -0.68
MDH1-215ENST00000539945 LARP4BQ92615 738 aaKnown RBP10.82□□□□□ -0.68
MDH1-215ENST00000539945 RAD54LQ92698 747 aa10.82□□□□□ -0.68
MDH1-215ENST00000539945 SLC5A5Q92911 643 aa10.82□□□□□ -0.68
MDH1-215ENST00000539945 MXRA8Q9BRK3 442 aa10.82□□□□□ -0.68
MDH1-215ENST00000539945 TEX13BQ9BXU2 312 aa10.82□□□□□ -0.68
MDH1-215ENST00000539945 ELP3Q9H9T3 547 aa10.82□□□□□ -0.68
MDH1-215ENST00000539945 HOMER2Q9NSB8 354 aa10.82□□□□□ -0.68
MDH1-215ENST00000539945 RNF146Q9NTX7 359 aa10.82□□□□□ -0.68
MDH1-215ENST00000539945 VAV3Q9UKW4 847 aa10.82□□□□□ -0.68
MDH1-215ENST00000539945 LOC285556D6RIA3 1793 aa10.81□□□□□ -0.68
MDH1-215ENST00000539945 TTC24A2A3L6 582 aaPredicted RBP10.81□□□□□ -0.68
MDH1-215ENST00000539945 IRF6O14896 467 aa10.81□□□□□ -0.68
MDH1-215ENST00000539945 PSMD10O75832 226 aa10.81□□□□□ -0.68
MDH1-215ENST00000539945 RHOBTB3O94955 611 aa10.81□□□□□ -0.68
MDH1-215ENST00000539945 BCRP11274 1271 aa10.81□□□□□ -0.68
MDH1-215ENST00000539945 FMR1Q06787 632 aaKnown RBP eCLIP10.81□□□□□ -0.68
MDH1-215ENST00000539945 PPIL2Q13356 520 aa10.81□□□□□ -0.68
MDH1-215ENST00000539945 TTLL12Q14166 644 aaPredicted RBP10.81□□□□□ -0.68
MDH1-215ENST00000539945 TMEM132BQ14DG7 1078 aa10.81□□□□□ -0.68
MDH1-215ENST00000539945 ECM1Q16610 540 aa10.81□□□□□ -0.68
MDH1-215ENST00000539945 LDLRAD1Q5T700 205 aa10.81□□□□□ -0.68
MDH1-215ENST00000539945 HAUS3Q68CZ6 603 aa10.81□□□□□ -0.68
MDH1-215ENST00000539945 XRRA1Q6P2D8 792 aa10.81□□□□□ -0.68
MDH1-215ENST00000539945 CCDC47Q96A33 483 aaKnown RBP10.81□□□□□ -0.68
MDH1-215ENST00000539945 CLMNQ96JQ2 1002 aa10.81□□□□□ -0.68
MDH1-215ENST00000539945 MED15Q96RN5 788 aa10.81□□□□□ -0.68
MDH1-215ENST00000539945 KCNH4Q9UQ05 1017 aa10.81□□□□□ -0.68
MDH1-215ENST00000539945 FCF1Q9Y324 198 aaKnown RBP10.81□□□□□ -0.68
MDH1-215ENST00000539945 RIPK3Q9Y572 518 aa10.81□□□□□ -0.68
MDH1-215ENST00000539945 COL11A1P12107 1806 aaPredicted RBP10.81□□□□□ -0.68
MDH1-215ENST00000539945 PVALEFA0A1B0GWK0 134 aa10.8□□□□□ -0.68
MDH1-215ENST00000539945 ZBTB24O43167 697 aaPredicted RBP10.8□□□□□ -0.68
MDH1-215ENST00000539945 PTMAP06454 111 aaKnown RBP10.8□□□□□ -0.68
MDH1-215ENST00000539945 ITGB5P18084 799 aa10.8□□□□□ -0.68
MDH1-215ENST00000539945 RPA1P27694 616 aa10.8□□□□□ -0.68
MDH1-215ENST00000539945 STAT3P40763 770 aa10.8□□□□□ -0.68
MDH1-215ENST00000539945 UBXN2AP68543 259 aa10.8□□□□□ -0.68
MDH1-215ENST00000539945 PPP2R5CQ13362 524 aa10.8□□□□□ -0.68
MDH1-215ENST00000539945 MCM6Q14566 821 aa10.8□□□□□ -0.68
MDH1-215ENST00000539945 TREML2Q5T2D2 321 aa10.8□□□□□ -0.68
MDH1-215ENST00000539945 LRCH2Q5VUJ6 765 aa10.8□□□□□ -0.68
MDH1-215ENST00000539945 SPATA1Q5VX52 437 aa10.8□□□□□ -0.68
MDH1-215ENST00000539945 SLC30A10Q6XR72 485 aa10.8□□□□□ -0.68
MDH1-215ENST00000539945 LBX2Q6XYB7 198 aa10.8□□□□□ -0.68
MDH1-215ENST00000539945 MOB2Q70IA6 237 aa10.8□□□□□ -0.68
MDH1-215ENST00000539945 OTOP1Q7RTM1 612 aa10.8□□□□□ -0.68
MDH1-215ENST00000539945 KCNK18Q7Z418 384 aa10.8□□□□□ -0.68
MDH1-215ENST00000539945 MB21D1Q8N884 522 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms