RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 PNOCQ13519 176 aa8.54□□□□□ -1.04
CCDC60-204ENST00000539847 MTFR1Q15390 333 aa8.54□□□□□ -1.04
CCDC60-204ENST00000539847 SAFBQ15424 915 aaKnown RBP eCLIP8.54□□□□□ -1.04
CCDC60-204ENST00000539847 MAP7D1Q3KQU3 841 aa8.54□□□□□ -1.04
CCDC60-204ENST00000539847 TJAP1Q5JTD0 557 aa8.54□□□□□ -1.04
CCDC60-204ENST00000539847 TTC39AQ5SRH9 613 aa8.54□□□□□ -1.04
CCDC60-204ENST00000539847 CDKAL1Q5VV42 579 aa8.54□□□□□ -1.04
CCDC60-204ENST00000539847 LRRC31Q6UY01 552 aa8.54□□□□□ -1.04
CCDC60-204ENST00000539847 CYP26C1Q6V0L0 522 aa8.54□□□□□ -1.04
CCDC60-204ENST00000539847 SH3RF1Q7Z6J0 888 aa8.54□□□□□ -1.04
CCDC60-204ENST00000539847 ZBTB33Q86T24 672 aa8.54□□□□□ -1.04
CCDC60-204ENST00000539847 TRIM50Q86XT4 487 aa8.54□□□□□ -1.04
CCDC60-204ENST00000539847 TMTC2Q8N394 836 aa8.54□□□□□ -1.04
CCDC60-204ENST00000539847 EHBP1Q8NDI1 1231 aa8.54□□□□□ -1.04
CCDC60-204ENST00000539847 CCDC148Q8NFR7 591 aa8.54□□□□□ -1.04
CCDC60-204ENST00000539847 U2AF1L4Q8WU68 220 aaKnown RBP8.54□□□□□ -1.04
CCDC60-204ENST00000539847 LPIN2Q92539 896 aa8.54□□□□□ -1.04
CCDC60-204ENST00000539847 OSBP2Q969R2 916 aa8.54□□□□□ -1.04
CCDC60-204ENST00000539847 GSDMAQ96QA5 445 aa8.54□□□□□ -1.04
CCDC60-204ENST00000539847 NCAPGQ9BPX3 1015 aa8.54□□□□□ -1.04
CCDC60-204ENST00000539847 RNF208Q9H0X6 261 aa8.54□□□□□ -1.04
CCDC60-204ENST00000539847 VPS18Q9P253 973 aa8.54□□□□□ -1.04
CCDC60-204ENST00000539847 LIMA1Q9UHB6 759 aaKnown RBP8.54□□□□□ -1.04
CCDC60-204ENST00000539847 CPA4Q9UI42 421 aa8.54□□□□□ -1.04
CCDC60-204ENST00000539847 LCMT1Q9UIC8 334 aa8.54□□□□□ -1.04
CCDC60-204ENST00000539847 A0A0C4DFX4 3053 aa8.54□□□□□ -1.04
CCDC60-204ENST00000539847 MROH7-TTC4A0A0A0MT08 1334 aa8.54□□□□□ -1.04
CCDC60-204ENST00000539847 MYH15Q9Y2K3 1946 aa8.53□□□□□ -1.04
CCDC60-204ENST00000539847 A0A0G2JLL6 359 aaPredicted RBP8.53□□□□□ -1.04
CCDC60-204ENST00000539847 SRRM3A6NNA2 597 aaPredicted RBP8.53□□□□□ -1.04
CCDC60-204ENST00000539847 SH2B2O14492 632 aaPredicted RBP8.53□□□□□ -1.04
CCDC60-204ENST00000539847 MFAP3LO75121 409 aa8.53□□□□□ -1.04
CCDC60-204ENST00000539847 ENTPD3O75355 529 aa8.53□□□□□ -1.04
CCDC60-204ENST00000539847 PRPF6O94906 941 aaKnown RBP8.53□□□□□ -1.04
CCDC60-204ENST00000539847 SGPL1O95470 568 aa8.53□□□□□ -1.04
CCDC60-204ENST00000539847 SLC5A1P13866 664 aa8.53□□□□□ -1.04
CCDC60-204ENST00000539847 IFNAR1P17181 557 aa8.53□□□□□ -1.04
CCDC60-204ENST00000539847 CTGFP29279 349 aa8.53□□□□□ -1.04
CCDC60-204ENST00000539847 MARCKSP29966 332 aaPredicted RBP8.53□□□□□ -1.04
CCDC60-204ENST00000539847 METAP2P50579 478 aaKnown RBP eCLIP8.53□□□□□ -1.04
CCDC60-204ENST00000539847 CACNB3P54284 484 aa8.53□□□□□ -1.04
CCDC60-204ENST00000539847 CKAP4Q07065 602 aaKnown RBP8.53□□□□□ -1.04
CCDC60-204ENST00000539847 PDE4BQ07343 736 aa8.53□□□□□ -1.04
CCDC60-204ENST00000539847 NTRK3Q16288 839 aa8.53□□□□□ -1.04
CCDC60-204ENST00000539847 LRRC24Q50LG9 513 aa8.53□□□□□ -1.04
CCDC60-204ENST00000539847 EMC10Q5UCC4 262 aa8.53□□□□□ -1.04
CCDC60-204ENST00000539847 PAPD7Q5XG87 772 aaKnown RBP8.53□□□□□ -1.04
CCDC60-204ENST00000539847 GPAT2Q6NUI2 795 aa8.53□□□□□ -1.04
CCDC60-204ENST00000539847 CDC42EP5Q6NZY7 148 aa8.53□□□□□ -1.04
CCDC60-204ENST00000539847 MMS22LQ6ZRQ5 1243 aa8.53□□□□□ -1.04
CCDC60-204ENST00000539847 PRRT2Q7Z6L0 340 aaPredicted RBP8.53□□□□□ -1.04
CCDC60-204ENST00000539847 NOSTRINQ8IVI9 506 aa8.53□□□□□ -1.04
CCDC60-204ENST00000539847 IGSF22Q8N9C0 903 aa8.53□□□□□ -1.04
CCDC60-204ENST00000539847 KLHDC4Q8TBB5 520 aa8.53□□□□□ -1.04
CCDC60-204ENST00000539847 AFAP1L1Q8TED9 768 aa8.53□□□□□ -1.04
CCDC60-204ENST00000539847 BAP1Q92560 729 aa8.53□□□□□ -1.04
CCDC60-204ENST00000539847 IQCDQ96DY2 449 aa8.53□□□□□ -1.04
CCDC60-204ENST00000539847 IDI2Q9BXS1 227 aa8.53□□□□□ -1.04
CCDC60-204ENST00000539847 SLC6A16Q9GZN6 736 aa8.53□□□□□ -1.04
CCDC60-204ENST00000539847 HAUS4Q9H6D7 363 aa8.53□□□□□ -1.04
CCDC60-204ENST00000539847 MRPL44Q9H9J2 332 aaKnown RBP8.53□□□□□ -1.04
CCDC60-204ENST00000539847 A1CFQ9NQ94 594 aaKnown RBP8.53□□□□□ -1.04
CCDC60-204ENST00000539847 GNL3LQ9NVN8 582 aaKnown RBP8.53□□□□□ -1.04
CCDC60-204ENST00000539847 AATFQ9NY61 560 aaKnown RBP eCLIP8.53□□□□□ -1.04
CCDC60-204ENST00000539847 EGFL7Q9UHF1 273 aa8.53□□□□□ -1.04
CCDC60-204ENST00000539847 GGA2Q9UJY4 613 aa8.53□□□□□ -1.04
CCDC60-204ENST00000539847 FBXO2Q9UK22 296 aaPredicted RBP8.53□□□□□ -1.04
CCDC60-204ENST00000539847 MYO6Q9UM54 1294 aa8.53□□□□□ -1.04
CCDC60-204ENST00000539847 FAN1Q9Y2M0 1017 aa8.53□□□□□ -1.04
CCDC60-204ENST00000539847 DAGLAQ9Y4D2 1042 aa8.53□□□□□ -1.04
CCDC60-204ENST00000539847 LAMA3Q16787 3333 aa8.53□□□□□ -1.04
CCDC60-204ENST00000539847 PDS5AQ29RF7 1337 aaKnown RBP8.53□□□□□ -1.04
CCDC60-204ENST00000539847 ATRNL1Q5VV63 1379 aa8.52□□□□□ -1.05
CCDC60-204ENST00000539847 MAGEB6P1A0A0J9YX57 407 aa8.52□□□□□ -1.05
CCDC60-204ENST00000539847 CCDC196A0A1B0GTZ2 297 aa8.52□□□□□ -1.05
CCDC60-204ENST00000539847 PHF20L1A8MW92 1017 aa8.52□□□□□ -1.05
CCDC60-204ENST00000539847 M0R2C6 588 aa8.52□□□□□ -1.05
CCDC60-204ENST00000539847 FOXP2O15409 715 aa8.52□□□□□ -1.05
CCDC60-204ENST00000539847 PRLRP16471 622 aa8.52□□□□□ -1.05
CCDC60-204ENST00000539847 VAMP1P23763 118 aa8.52□□□□□ -1.05
CCDC60-204ENST00000539847 SCNN1AP37088 669 aa8.52□□□□□ -1.05
CCDC60-204ENST00000539847 ATP1A2P50993 1020 aa8.52□□□□□ -1.05
CCDC60-204ENST00000539847 ADKP55263 362 aaKnown RBP8.52□□□□□ -1.05
CCDC60-204ENST00000539847 GSCP56915 257 aaPredicted RBP8.52□□□□□ -1.05
CCDC60-204ENST00000539847 CLDN10P78369 228 aa8.52□□□□□ -1.05
CCDC60-204ENST00000539847 PRKCZQ05513 592 aa8.52□□□□□ -1.05
CCDC60-204ENST00000539847 SSRP1Q08945 709 aaKnown RBP8.52□□□□□ -1.05
CCDC60-204ENST00000539847 RBL2Q08999 1139 aa8.52□□□□□ -1.05
CCDC60-204ENST00000539847 CUL4BQ13620 913 aa8.52□□□□□ -1.05
CCDC60-204ENST00000539847 TTF1Q15361 905 aaPredicted RBP8.52□□□□□ -1.05
CCDC60-204ENST00000539847 UBE3CQ15386 1083 aa8.52□□□□□ -1.05
CCDC60-204ENST00000539847 ZNF569Q5MCW4 686 aa8.52□□□□□ -1.05
CCDC60-204ENST00000539847 IQCEQ6IPM2 695 aa8.52□□□□□ -1.05
CCDC60-204ENST00000539847 TRAF7Q6Q0C0 670 aa8.52□□□□□ -1.05
CCDC60-204ENST00000539847 RAD9BQ6WBX8 426 aa8.52□□□□□ -1.05
CCDC60-204ENST00000539847 MIGA2Q7L4E1 593 aa8.52□□□□□ -1.05
CCDC60-204ENST00000539847 TRAPPC11Q7Z392 1133 aa8.52□□□□□ -1.05
CCDC60-204ENST00000539847 SCYL3Q8IZE3 742 aa8.52□□□□□ -1.05
CCDC60-204ENST00000539847 ANKLE1Q8NAG6 615 aa8.52□□□□□ -1.05
CCDC60-204ENST00000539847 C1orf131Q8NDD1 294 aaKnown RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 180.7 ms