RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 SAMD3Q8N6K7 520 aa19■□□□□ 0.63
PCDHB17P-201ENST00000539533 ERMNQ8TAM6 284 aa19■□□□□ 0.63
PCDHB17P-201ENST00000539533 UBXN4Q92575 508 aa19■□□□□ 0.63
PCDHB17P-201ENST00000539533 HPS3Q969F9 1004 aa19■□□□□ 0.63
PCDHB17P-201ENST00000539533 SRRTQ9BXP5 876 aaKnown RBP19■□□□□ 0.63
PCDHB17P-201ENST00000539533 CALCOCO1Q9P1Z2 691 aa19■□□□□ 0.63
PCDHB17P-201ENST00000539533 RABGAP1Q9Y3P9 1069 aa19■□□□□ 0.63
PCDHB17P-201ENST00000539533 FANCGO15287 622 aa18.99■□□□□ 0.63
PCDHB17P-201ENST00000539533 SSBP05455 408 aaKnown RBP eCLIP18.99■□□□□ 0.63
PCDHB17P-201ENST00000539533 ZNF18P17022 549 aa18.99■□□□□ 0.63
PCDHB17P-201ENST00000539533 RPA1P27694 616 aa18.99■□□□□ 0.63
PCDHB17P-201ENST00000539533 PSMC6P62333 389 aa18.99■□□□□ 0.63
PCDHB17P-201ENST00000539533 FAM193AP78312 1265 aa18.99■□□□□ 0.63
PCDHB17P-201ENST00000539533 SETQ01105 290 aaPredicted RBP18.99■□□□□ 0.63
PCDHB17P-201ENST00000539533 CYP4A11Q02928 519 aa18.99■□□□□ 0.63
PCDHB17P-201ENST00000539533 STK4Q13043 487 aa18.99■□□□□ 0.63
PCDHB17P-201ENST00000539533 PGM5Q15124 567 aa18.99■□□□□ 0.63
PCDHB17P-201ENST00000539533 PCNX4Q63HM2 1172 aa18.99■□□□□ 0.63
PCDHB17P-201ENST00000539533 ARMC9Q7Z3E5 817 aa18.99■□□□□ 0.63
PCDHB17P-201ENST00000539533 GIMAP8Q8ND71 665 aaPredicted RBP18.99■□□□□ 0.63
PCDHB17P-201ENST00000539533 DDX12PQ92771 950 aa18.99■□□□□ 0.63
PCDHB17P-201ENST00000539533 OPTNQ96CV9 577 aa18.99■□□□□ 0.63
PCDHB17P-201ENST00000539533 ZNF408Q9H9D4 720 aa18.99■□□□□ 0.63
PCDHB17P-201ENST00000539533 RGL1Q9NZL6 768 aa18.99■□□□□ 0.63
PCDHB17P-201ENST00000539533 RBBP6Q7Z6E9 1792 aaKnown RBP18.99■□□□□ 0.63
PCDHB17P-201ENST00000539533 GAS7O60861 476 aa18.99■□□□□ 0.63
PCDHB17P-201ENST00000539533 PNMA6AP0CW24 399 aaPredicted RBP18.99■□□□□ 0.63
PCDHB17P-201ENST00000539533 FCER1AP12319 257 aa18.99■□□□□ 0.63
PCDHB17P-201ENST00000539533 GOLGA8FQ08AF8 430 aa18.99■□□□□ 0.63
PCDHB17P-201ENST00000539533 GOLGA8DPQ0D2H9 430 aa18.99■□□□□ 0.63
PCDHB17P-201ENST00000539533 SPATA1Q5VX52 437 aa18.99■□□□□ 0.63
PCDHB17P-201ENST00000539533 ADSSL1Q8N142 457 aa18.99■□□□□ 0.63
PCDHB17P-201ENST00000539533 MNS1Q8NEH6 495 aa18.99■□□□□ 0.63
PCDHB17P-201ENST00000539533 EIF2AK1Q9BQI3 630 aaKnown RBP18.99■□□□□ 0.63
PCDHB17P-201ENST00000539533 PXMP2Q9NR77 195 aa18.99■□□□□ 0.63
PCDHB17P-201ENST00000539533 KCNH7Q9NS40 1196 aa18.99■□□□□ 0.63
PCDHB17P-201ENST00000539533 EXOC1Q9NV70 894 aa18.99■□□□□ 0.63
PCDHB17P-201ENST00000539533 PKD2L1Q9P0L9 805 aa18.99■□□□□ 0.63
PCDHB17P-201ENST00000539533 FRMPD4Q14CM0 1322 aa18.98■□□□□ 0.63
PCDHB17P-201ENST00000539533 IPO5O00410 1097 aaKnown RBP18.98■□□□□ 0.63
PCDHB17P-201ENST00000539533 CXCL11O14625 94 aa18.98■□□□□ 0.63
PCDHB17P-201ENST00000539533 URI1O94763 535 aaPredicted RBP18.98■□□□□ 0.63
PCDHB17P-201ENST00000539533 PLA2G4BP0C869 781 aa18.98■□□□□ 0.63
PCDHB17P-201ENST00000539533 MYCLP12524 364 aaPredicted RBP18.98■□□□□ 0.63
PCDHB17P-201ENST00000539533 PROCA1Q8NCQ7 364 aaPredicted RBP18.98■□□□□ 0.63
PCDHB17P-201ENST00000539533 NELFBQ8WX92 580 aa18.98■□□□□ 0.63
PCDHB17P-201ENST00000539533 PDCD2LQ9BRP1 358 aa18.98■□□□□ 0.63
PCDHB17P-201ENST00000539533 ARGLU1Q9NWB6 273 aaPredicted RBP18.98■□□□□ 0.63
PCDHB17P-201ENST00000539533 UBIAD1Q9Y5Z9 338 aa18.98■□□□□ 0.63
PCDHB17P-201ENST00000539533 ZSCAN12O43309 604 aa18.98■□□□□ 0.63
PCDHB17P-201ENST00000539533 TADA3O75528 432 aa18.98■□□□□ 0.63
PCDHB17P-201ENST00000539533 HOXA7P31268 230 aaPredicted RBP18.98■□□□□ 0.63
PCDHB17P-201ENST00000539533 PAK1Q13153 545 aa18.98■□□□□ 0.63
PCDHB17P-201ENST00000539533 PPP2R5CQ13362 524 aa18.98■□□□□ 0.63
PCDHB17P-201ENST00000539533 PTPN21Q16825 1174 aa18.98■□□□□ 0.63
PCDHB17P-201ENST00000539533 TKFCQ3LXA3 575 aa18.98■□□□□ 0.63
PCDHB17P-201ENST00000539533 ARHGEF16Q5VV41 709 aa18.98■□□□□ 0.63
PCDHB17P-201ENST00000539533 LBX2Q6XYB7 198 aa18.98■□□□□ 0.63
PCDHB17P-201ENST00000539533 CREBRFQ8IUR6 639 aa18.98■□□□□ 0.63
PCDHB17P-201ENST00000539533 TMEM139Q8IV31 216 aa18.98■□□□□ 0.63
PCDHB17P-201ENST00000539533 BTBD7Q9P203 1132 aa18.98■□□□□ 0.63
PCDHB17P-201ENST00000539533 KCNH4Q9UQ05 1017 aa18.98■□□□□ 0.63
PCDHB17P-201ENST00000539533 ARHGAP6O43182 974 aa18.97■□□□□ 0.63
PCDHB17P-201ENST00000539533 SLC26A4O43511 780 aa18.97■□□□□ 0.63
PCDHB17P-201ENST00000539533 IDEP14735 1019 aa18.97■□□□□ 0.63
PCDHB17P-201ENST00000539533 PPIL2Q13356 520 aa18.97■□□□□ 0.63
PCDHB17P-201ENST00000539533 CCDC47Q96A33 483 aaKnown RBP18.97■□□□□ 0.63
PCDHB17P-201ENST00000539533 UNC45AQ9H3U1 944 aa18.97■□□□□ 0.63
PCDHB17P-201ENST00000539533 ACAD9Q9H845 621 aa18.97■□□□□ 0.63
PCDHB17P-201ENST00000539533 INTS13Q9NVM9 706 aa18.97■□□□□ 0.63
PCDHB17P-201ENST00000539533 RWDD2AQ9UIY3 292 aa18.97■□□□□ 0.63
PCDHB17P-201ENST00000539533 DDX39AO00148 427 aaKnown RBP18.97■□□□□ 0.63
PCDHB17P-201ENST00000539533 ZRANB2O95218 330 aaKnown RBP eCLIP18.97■□□□□ 0.63
PCDHB17P-201ENST00000539533 BCRP11274 1271 aa18.97■□□□□ 0.63
PCDHB17P-201ENST00000539533 SEMA3FQ13275 785 aa18.97■□□□□ 0.63
PCDHB17P-201ENST00000539533 LDLRAD1Q5T700 205 aa18.97■□□□□ 0.63
PCDHB17P-201ENST00000539533 UNC13DQ70J99 1090 aa18.97■□□□□ 0.63
PCDHB17P-201ENST00000539533 DNAJC19Q96DA6 116 aa18.97■□□□□ 0.63
PCDHB17P-201ENST00000539533 HSD17B14Q9BPX1 270 aa18.97■□□□□ 0.63
PCDHB17P-201ENST00000539533 RRAGCQ9HB90 399 aa18.97■□□□□ 0.63
PCDHB17P-201ENST00000539533 A1CFQ9NQ94 594 aaKnown RBP18.97■□□□□ 0.63
PCDHB17P-201ENST00000539533 PVALEFA0A1B0GWK0 134 aa18.96■□□□□ 0.63
PCDHB17P-201ENST00000539533 TRIM49BA6NDI0 452 aa18.96■□□□□ 0.63
PCDHB17P-201ENST00000539533 EFCAB8A8MWE9 144 aa18.96■□□□□ 0.63
PCDHB17P-201ENST00000539533 CTTNQ14247 550 aaKnown RBP18.96■□□□□ 0.63
PCDHB17P-201ENST00000539533 TMCO3Q6UWJ1 677 aa18.96■□□□□ 0.63
PCDHB17P-201ENST00000539533 CARD6Q9BX69 1037 aa18.96■□□□□ 0.63
PCDHB17P-201ENST00000539533 LRRC27Q9C0I9 530 aa18.96■□□□□ 0.63
PCDHB17P-201ENST00000539533 SLC39A2Q9NP94 309 aa18.96■□□□□ 0.63
PCDHB17P-201ENST00000539533 JADE2Q9NQC1 790 aa18.96■□□□□ 0.63
PCDHB17P-201ENST00000539533 CYP39A1Q9NYL5 469 aa18.96■□□□□ 0.63
PCDHB17P-201ENST00000539533 PPP2R2CQ9Y2T4 447 aa18.96■□□□□ 0.63
PCDHB17P-201ENST00000539533 LOC285556D6RIA3 1793 aa18.96■□□□□ 0.63
PCDHB17P-201ENST00000539533 NPHP3-ACAD11A0A0J9YXS1 232 aa18.96■□□□□ 0.63
PCDHB17P-201ENST00000539533 SLITRK3O94933 977 aa18.96■□□□□ 0.63
PCDHB17P-201ENST00000539533 GJA5P36382 358 aa18.96■□□□□ 0.63
PCDHB17P-201ENST00000539533 PLA2G4AP47712 749 aa18.96■□□□□ 0.63
PCDHB17P-201ENST00000539533 PMS1P54277 932 aaKnown RBP18.96■□□□□ 0.63
PCDHB17P-201ENST00000539533 SLC12A3P55017 1021 aa18.96■□□□□ 0.63
PCDHB17P-201ENST00000539533 IRX3P78415 501 aaPredicted RBP18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms